RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 OR51A2Q8NGJ7 313 aa6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 SAP25Q8TEE9 199 aa6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 ZNF418Q8TF45 676 aaPredicted RBP6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 TMEM170AQ8WVE7 144 aa6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 OR10C1Q96KK4 312 aa6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 SIGLEC12Q96PQ1 595 aa6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 AKIRIN1Q9H9L7 192 aaPredicted RBP6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 TAS2R4Q9NYW5 299 aa6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 AK3Q9UIJ7 227 aa6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 BOKQ9UMX3 212 aaPredicted RBP6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 R4GMQ9 66 aa6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 NCKAP5O14513 1909 aa6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 IGLV3-32A0A0A0MS00 114 aa6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 A0A1B0GTI1 187 aa6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 LIPT2A6NK58 231 aa6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 YPEL1O60688 119 aa6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 CD3DP04234 171 aa6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 ISG15P05161 165 aa6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 C1QTNF9P0C862 333 aa6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 CLDN15P56746 228 aa6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 MEF2BQ02080 365 aaPredicted RBP6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 HIST1H1AQ02539 215 aaPredicted RBP6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 POU3F1Q03052 451 aaPredicted RBP6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 ACOT6Q3I5F7 207 aaPredicted RBP6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 FAM69BQ5VUD6 431 aa6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 KCTD18Q6PI47 426 aaPredicted RBP6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 ZNF627Q7L945 461 aa6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 ADAD2Q8NCV1 583 aaKnown RBP6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 FAM3DQ96BQ1 224 aa6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 YPEL2Q96QA6 119 aa6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 NECAP2Q9NVZ3 263 aa6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 FBXO4Q9UKT5 387 aa6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 DHDHQ9UQ10 334 aa6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 EMC9Q9Y3B6 208 aa6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 M0QYG6 137 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 P2RY10O00398 339 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 SPRY1O43609 319 aaPredicted RBP6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 FTH1P19P0C7X4 201 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 Q6ZWC4 215 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 C15orf40Q8WUR7 153 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 CFHR4Q92496 578 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 NPVFQ9HCQ7 196 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 IGHV2-26A0A0B4J1V2 119 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 LOC107986453A0A1B0GWG9 222 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 SMIM9A6NGZ8 99 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 H3BML4 177 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 B4GALT1P15291 398 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 SLC6A9P48067 706 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 DAP3P51398 398 aaKnown RBP6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 TPPP2P59282 170 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 RPL7L1Q6DKI1 246 aaKnown RBP6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 MRPL14Q6P1L8 145 aaKnown RBP6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 CMTM2Q8TAZ6 248 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 NRGNQ92686 78 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 FAM206AQ9NX38 181 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 ALKBH4Q9NXW9 302 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 MED12Q93074 2177 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 TRAV8-6A0A0B4J262 113 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 F5H5K5 113 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 CNN1P51911 297 aaKnown RBP6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 ZNF92Q03936 586 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 NR0B2Q15466 257 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 PNKDQ8N490 385 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 CLEC1AQ8NC01 280 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 OR13G1Q8NGZ3 307 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 OR4A5Q8NH83 315 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 KCNG3Q8TAE7 436 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 DDIT4LQ96D03 193 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 ZC2HC1AQ96GY0 325 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 HSPB9Q9BQS6 159 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 EMC6Q9BV81 110 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 SCRT1Q9BWW7 348 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 PARLQ9H300 379 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 OCIAD1Q9NX40 245 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 FBXL17Q9UF56 701 aa6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 MRPS28Q9Y2Q9 187 aaKnown RBP6.38□□□□□ -1.39
PDLIM5-219ENST00000514743 J3QR89 54 aa6.37□□□□□ -1.39
PDLIM5-219ENST00000514743 PRH1P02810 166 aa6.37□□□□□ -1.39
PDLIM5-219ENST00000514743 CTRLP40313 264 aa6.37□□□□□ -1.39
PDLIM5-219ENST00000514743 RND2P52198 227 aa6.37□□□□□ -1.39
PDLIM5-219ENST00000514743 MYBPHQ13203 477 aa6.37□□□□□ -1.39
PDLIM5-219ENST00000514743 TMEM42Q69YG0 159 aa6.37□□□□□ -1.39
PDLIM5-219ENST00000514743 C1orf174Q8IYL3 243 aa6.37□□□□□ -1.39
PDLIM5-219ENST00000514743 OR8G5Q8NG78 346 aa6.37□□□□□ -1.39
PDLIM5-219ENST00000514743 SLC25A44Q96H78 314 aaPredicted RBP6.37□□□□□ -1.39
PDLIM5-219ENST00000514743 RCHY1Q96PM5 261 aa6.37□□□□□ -1.39
PDLIM5-219ENST00000514743 DUSP23Q9BVJ7 150 aa6.37□□□□□ -1.39
PDLIM5-219ENST00000514743 RBM24Q9BX46 236 aaKnown RBP6.37□□□□□ -1.39
PDLIM5-219ENST00000514743 Q9N2K0 584 aa6.37□□□□□ -1.39
PDLIM5-219ENST00000514743 GCM1Q9NP62 436 aa6.37□□□□□ -1.39
PDLIM5-219ENST00000514743 PLA2G3Q9NZ20 509 aa6.37□□□□□ -1.39
PDLIM5-219ENST00000514743 KLRF1Q9NZS2 232 aa6.37□□□□□ -1.39
PDLIM5-219ENST00000514743 JKAMPQ9P055 326 aa6.37□□□□□ -1.39
PDLIM5-219ENST00000514743 RARRES3Q9UL19 164 aa6.37□□□□□ -1.39
PDLIM5-219ENST00000514743 ARID1AO14497 2285 aa6.37□□□□□ -1.39
PDLIM5-219ENST00000514743 C13orf42A0A1B0GVH6 325 aa6.37□□□□□ -1.39
PDLIM5-219ENST00000514743 M0R1X1 148 aa6.37□□□□□ -1.39
PDLIM5-219ENST00000514743 USF1P22415 310 aaPredicted RBP6.37□□□□□ -1.39
PDLIM5-219ENST00000514743 CX3CR1P49238 355 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms