RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 S100A7P31151 101 aa11.33□□□□□ -0.6
TCOF1-213ENST00000514442 IER3P46695 156 aa11.33□□□□□ -0.6
TCOF1-213ENST00000514442 ERVFRD-1P60508 538 aa11.33□□□□□ -0.6
TCOF1-213ENST00000514442 EGR4Q05215 589 aa11.33□□□□□ -0.6
TCOF1-213ENST00000514442 TMEM147Q9BVK8 224 aa11.33□□□□□ -0.6
TCOF1-213ENST00000514442 SRXN1Q9BYN0 137 aa11.33□□□□□ -0.6
TCOF1-213ENST00000514442 IGHV3OR15-7A0A075B7D8 119 aa11.33□□□□□ -0.6
TCOF1-213ENST00000514442 CTXND1A0A1B0GTU2 59 aa11.33□□□□□ -0.6
TCOF1-213ENST00000514442 SYNGR2O43760 224 aa11.33□□□□□ -0.6
TCOF1-213ENST00000514442 TDGF1P3P51864 188 aa11.33□□□□□ -0.6
TCOF1-213ENST00000514442 P2RY6Q15077 328 aa11.33□□□□□ -0.6
TCOF1-213ENST00000514442 ZNRF4Q8WWF5 429 aa11.33□□□□□ -0.6
TCOF1-213ENST00000514442 WDR61Q9GZS3 305 aaKnown RBP11.33□□□□□ -0.6
TCOF1-213ENST00000514442 CLDN16Q9Y5I7 305 aa11.32□□□□□ -0.6
TCOF1-213ENST00000514442 MARS2Q96GW9 593 aaKnown RBP11.32□□□□□ -0.6
TCOF1-213ENST00000514442 RTBDNQ9BSG5 229 aaPredicted RBP11.32□□□□□ -0.6
TCOF1-213ENST00000514442 ALPK2Q86TB3 2170 aa11.32□□□□□ -0.6
TCOF1-213ENST00000514442 TMEM170AQ8WVE7 144 aa11.32□□□□□ -0.6
TCOF1-213ENST00000514442 C10orf35Q96D05 121 aa11.32□□□□□ -0.6
TCOF1-213ENST00000514442 ABHD14BQ96IU4 210 aa11.32□□□□□ -0.6
TCOF1-213ENST00000514442 PPYP01298 95 aa11.32□□□□□ -0.6
TCOF1-213ENST00000514442 HIST3H3Q16695 136 aa11.32□□□□□ -0.6
TCOF1-213ENST00000514442 CLDND2Q8NHS1 167 aa11.32□□□□□ -0.6
TCOF1-213ENST00000514442 THSD7BQ9C0I4 1608 aa11.31□□□□□ -0.6
TCOF1-213ENST00000514442 CLEC3BP05452 202 aa11.31□□□□□ -0.6
TCOF1-213ENST00000514442 PPP1R32Q7Z5V6 425 aa11.31□□□□□ -0.6
TCOF1-213ENST00000514442 POM121L2Q96KW2 1035 aa11.31□□□□□ -0.6
TCOF1-213ENST00000514442 ADH4P08319 380 aa11.31□□□□□ -0.6
TCOF1-213ENST00000514442 UBE2G1P62253 170 aa11.31□□□□□ -0.6
TCOF1-213ENST00000514442 ICAM4Q14773 271 aa11.31□□□□□ -0.6
TCOF1-213ENST00000514442 RIPPLY2Q5TAB7 128 aa11.31□□□□□ -0.6
TCOF1-213ENST00000514442 SLC25A47Q6Q0C1 308 aa11.31□□□□□ -0.6
TCOF1-213ENST00000514442 MRPL52Q86TS9 123 aaKnown RBP11.31□□□□□ -0.6
TCOF1-213ENST00000514442 SDF2L1Q9HCN8 221 aa11.31□□□□□ -0.6
TCOF1-213ENST00000514442 A0A1B0GW64 132 aa11.31□□□□□ -0.6
TCOF1-213ENST00000514442 LRRC3CA6NJW4 275 aa11.31□□□□□ -0.6
TCOF1-213ENST00000514442 J3QT63 122 aa11.31□□□□□ -0.6
TCOF1-213ENST00000514442 C1orf194Q5T5A4 169 aa11.31□□□□□ -0.6
TCOF1-213ENST00000514442 MESP1Q9BRJ9 268 aa11.31□□□□□ -0.6
TCOF1-213ENST00000514442 RSG1Q9BU20 258 aa11.31□□□□□ -0.6
TCOF1-213ENST00000514442 CCL28Q9NRJ3 127 aa11.31□□□□□ -0.6
TCOF1-213ENST00000514442 LHFPL6Q9Y693 200 aa11.31□□□□□ -0.6
TCOF1-213ENST00000514442 ZSWIM8A7E2V4 1837 aa11.31□□□□□ -0.6
TCOF1-213ENST00000514442 KBTBD11O94819 623 aa11.31□□□□□ -0.6
TCOF1-213ENST00000514442 TMEM187Q14656 261 aa11.31□□□□□ -0.6
TCOF1-213ENST00000514442 INO80CQ6PI98 192 aaPredicted RBP11.31□□□□□ -0.6
TCOF1-213ENST00000514442 GAPTQ8N292 157 aa11.31□□□□□ -0.6
TCOF1-213ENST00000514442 RPEQ96AT9 228 aa11.31□□□□□ -0.6
TCOF1-213ENST00000514442 CHRDL1Q9BU40 450 aa11.31□□□□□ -0.6
TCOF1-213ENST00000514442 AURKAIP1Q9NWT8 199 aaPredicted RBP11.31□□□□□ -0.6
TCOF1-213ENST00000514442 MTCL1Q9Y4B5 1905 aaKnown RBP11.3□□□□□ -0.6
TCOF1-213ENST00000514442 IFI6P09912 130 aa11.3□□□□□ -0.6
TCOF1-213ENST00000514442 RPL24P83731 157 aaKnown RBP11.3□□□□□ -0.6
TCOF1-213ENST00000514442 PMCHL1Q16048 86 aa11.3□□□□□ -0.6
TCOF1-213ENST00000514442 MOB3AQ96BX8 217 aa11.3□□□□□ -0.6
TCOF1-213ENST00000514442 SAP30LQ9HAJ7 183 aa11.3□□□□□ -0.6
TCOF1-213ENST00000514442 SPTBN2O15020 2390 aa11.3□□□□□ -0.6
TCOF1-213ENST00000514442 hADV38S2A0JD32 116 aa11.3□□□□□ -0.6
TCOF1-213ENST00000514442 OR4A8P0C604 315 aa11.3□□□□□ -0.6
TCOF1-213ENST00000514442 GNG4P50150 75 aa11.3□□□□□ -0.6
TCOF1-213ENST00000514442 SCGB2A2Q13296 93 aa11.3□□□□□ -0.6
TCOF1-213ENST00000514442 VMA21Q3ZAQ7 101 aa11.3□□□□□ -0.6
TCOF1-213ENST00000514442 FAM214BQ7L5A3 538 aa11.3□□□□□ -0.6
TCOF1-213ENST00000514442 OR5D13Q8NGL4 314 aa11.3□□□□□ -0.6
TCOF1-213ENST00000514442 ZNF519Q8TB69 540 aa11.3□□□□□ -0.6
TCOF1-213ENST00000514442 TMEM14DPA8MWL7 114 aa11.3□□□□□ -0.6
TCOF1-213ENST00000514442 ZNF207O43670 478 aaKnown RBP11.3□□□□□ -0.6
TCOF1-213ENST00000514442 TMEM105Q8N8V8 129 aa11.3□□□□□ -0.6
TCOF1-213ENST00000514442 WBP1Q96G27 269 aa11.3□□□□□ -0.6
TCOF1-213ENST00000514442 TMEM191AQ9H0A3 160 aa11.3□□□□□ -0.6
TCOF1-213ENST00000514442 CHEK1O14757 476 aa11.29□□□□□ -0.6
TCOF1-213ENST00000514442 RFPL3SP0C7P2 107 aa11.29□□□□□ -0.6
TCOF1-213ENST00000514442 GZMBP10144 247 aa11.29□□□□□ -0.6
TCOF1-213ENST00000514442 C19orf35Q6ZS72 473 aa11.29□□□□□ -0.6
TCOF1-213ENST00000514442 OR5A2Q8NGI9 324 aa11.29□□□□□ -0.6
TCOF1-213ENST00000514442 A0A1B0GU03 582 aa11.29□□□□□ -0.6
TCOF1-213ENST00000514442 C16orf97H3BN30 126 aa11.29□□□□□ -0.6
TCOF1-213ENST00000514442 CCL21O00585 134 aa11.29□□□□□ -0.6
TCOF1-213ENST00000514442 SNAI3Q3KNW1 292 aa11.29□□□□□ -0.6
TCOF1-213ENST00000514442 PARLQ9H300 379 aa11.29□□□□□ -0.6
TCOF1-213ENST00000514442 RBKSQ9H477 322 aa11.29□□□□□ -0.6
TCOF1-213ENST00000514442 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.29□□□□□ -0.6
TCOF1-213ENST00000514442 C9JQL5 133 aa11.29□□□□□ -0.6
TCOF1-213ENST00000514442 TAS2R45P59539 299 aa11.29□□□□□ -0.6
TCOF1-213ENST00000514442 LCN2P80188 198 aa11.29□□□□□ -0.6
TCOF1-213ENST00000514442 AESQ08117 197 aa11.29□□□□□ -0.6
TCOF1-213ENST00000514442 UNC119Q13432 240 aa11.29□□□□□ -0.6
TCOF1-213ENST00000514442 Q56UQ5 140 aa11.29□□□□□ -0.6
TCOF1-213ENST00000514442 C1orf185Q5T7R7 199 aa11.29□□□□□ -0.6
TCOF1-213ENST00000514442 LRFN3Q9BTN0 628 aa11.29□□□□□ -0.6
TCOF1-213ENST00000514442 MRPL18Q9H0U6 180 aaKnown RBP11.29□□□□□ -0.6
TCOF1-213ENST00000514442 TMEM242Q9NWH2 141 aa11.29□□□□□ -0.6
TCOF1-213ENST00000514442 A0A087WV48 116 aa11.29□□□□□ -0.6
TCOF1-213ENST00000514442 IGKV3D-11A0A0A0MRZ8 115 aa11.29□□□□□ -0.6
TCOF1-213ENST00000514442 GRIFINA4D1Z8 144 aa11.29□□□□□ -0.6
TCOF1-213ENST00000514442 RAB29O14966 203 aa11.29□□□□□ -0.6
TCOF1-213ENST00000514442 IGFBP7Q16270 282 aa11.29□□□□□ -0.6
TCOF1-213ENST00000514442 RSPO4Q2I0M5 234 aaPredicted RBP11.29□□□□□ -0.6
TCOF1-213ENST00000514442 TPRX1Q8N7U7 411 aa11.29□□□□□ -0.6
TCOF1-213ENST00000514442 TRBV24-1A0A075B6N3 115 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms