RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 CASQ2O14958 399 aaPredicted RBP9.41□□□□□ -0.9
SNHG4-208ENST00000514110 IGHV3-11P01762 117 aa9.41□□□□□ -0.9
SNHG4-208ENST00000514110 GSTP1P09211 210 aaKnown RBP9.41□□□□□ -0.9
SNHG4-208ENST00000514110 MC5RP33032 325 aa9.41□□□□□ -0.9
SNHG4-208ENST00000514110 HLA-DRB3P79483 266 aa9.41□□□□□ -0.9
SNHG4-208ENST00000514110 TMEM267Q0VDI3 215 aaPredicted RBP9.41□□□□□ -0.9
SNHG4-208ENST00000514110 P2RY14Q15391 338 aa9.41□□□□□ -0.9
SNHG4-208ENST00000514110 ACSM6Q6P461 480 aa9.41□□□□□ -0.9
SNHG4-208ENST00000514110 CD200R1LQ6Q8B3 271 aa9.41□□□□□ -0.9
SNHG4-208ENST00000514110 UNQ5815/PRO19632Q6UWF5 114 aa9.41□□□□□ -0.9
SNHG4-208ENST00000514110 OVCH2Q7RTZ1 564 aa9.41□□□□□ -0.9
SNHG4-208ENST00000514110 FAM89BQ8N5H3 189 aa9.41□□□□□ -0.9
SNHG4-208ENST00000514110 TCTEX1D1Q8N7M0 179 aa9.41□□□□□ -0.9
SNHG4-208ENST00000514110 DRAXINQ8NBI3 349 aaPredicted RBP9.41□□□□□ -0.9
SNHG4-208ENST00000514110 LFNGQ8NES3 379 aa9.41□□□□□ -0.9
SNHG4-208ENST00000514110 OR6M1Q8NGM8 313 aa9.41□□□□□ -0.9
SNHG4-208ENST00000514110 ARPC1AQ92747 370 aa9.41□□□□□ -0.9
SNHG4-208ENST00000514110 MS4A10Q96PG2 267 aa9.41□□□□□ -0.9
SNHG4-208ENST00000514110 METTL1Q9UBP6 276 aaKnown RBP9.41□□□□□ -0.9
SNHG4-208ENST00000514110 RNF150Q9ULK6 438 aa9.41□□□□□ -0.9
SNHG4-208ENST00000514110 STAB2Q8WWQ8 2551 aa9.41□□□□□ -0.9
SNHG4-208ENST00000514110 TRIM64CA6NLI5 447 aa9.4□□□□□ -0.9
SNHG4-208ENST00000514110 FOXI3A8MTJ6 420 aaPredicted RBP9.4□□□□□ -0.9
SNHG4-208ENST00000514110 RBBP9O75884 186 aa9.4□□□□□ -0.9
SNHG4-208ENST00000514110 CA2P00918 260 aa9.4□□□□□ -0.9
SNHG4-208ENST00000514110 IGKV1-16P04430 117 aa9.4□□□□□ -0.9
SNHG4-208ENST00000514110 SCTP09683 121 aa9.4□□□□□ -0.9
SNHG4-208ENST00000514110 GP9P14770 177 aa9.4□□□□□ -0.9
SNHG4-208ENST00000514110 ZBTB25P24278 435 aa9.4□□□□□ -0.9
SNHG4-208ENST00000514110 TMEM50BP56557 158 aa9.4□□□□□ -0.9
SNHG4-208ENST00000514110 PSG5Q15238 335 aa9.4□□□□□ -0.9
SNHG4-208ENST00000514110 SPHARQ15513 63 aa9.4□□□□□ -0.9
SNHG4-208ENST00000514110 MED22Q15528 200 aa9.4□□□□□ -0.9
SNHG4-208ENST00000514110 AKIRIN2Q53H80 203 aa9.4□□□□□ -0.9
SNHG4-208ENST00000514110 ACTBL2Q562R1 376 aa9.4□□□□□ -0.9
SNHG4-208ENST00000514110 LIPKQ5VXJ0 399 aa9.4□□□□□ -0.9
SNHG4-208ENST00000514110 PYHIN1Q6K0P9 492 aa9.4□□□□□ -0.9
SNHG4-208ENST00000514110 TMEM91Q6ZNR0 172 aa9.4□□□□□ -0.9
SNHG4-208ENST00000514110 ZNF383Q8NA42 475 aa9.4□□□□□ -0.9
SNHG4-208ENST00000514110 TMEM203Q969S6 136 aa9.4□□□□□ -0.9
SNHG4-208ENST00000514110 RCHY1Q96PM5 261 aa9.4□□□□□ -0.9
SNHG4-208ENST00000514110 RNF5Q99942 180 aa9.4□□□□□ -0.9
SNHG4-208ENST00000514110 RIMS4Q9H426 269 aaPredicted RBP9.4□□□□□ -0.9
SNHG4-208ENST00000514110 Q9N2K0 584 aa9.4□□□□□ -0.9
SNHG4-208ENST00000514110 IGKV1-6A0A0C4DH72 117 aa9.39□□□□□ -0.91
SNHG4-208ENST00000514110 SLC17A2O00624 439 aa9.39□□□□□ -0.91
SNHG4-208ENST00000514110 ARPC1BO15143 372 aaKnown RBP9.39□□□□□ -0.91
SNHG4-208ENST00000514110 HSPA12AO43301 675 aa9.39□□□□□ -0.91
SNHG4-208ENST00000514110 HSPB1P04792 205 aaKnown RBP9.39□□□□□ -0.91
SNHG4-208ENST00000514110 OR8U9P0C7N5 309 aa9.39□□□□□ -0.91
SNHG4-208ENST00000514110 FRMD6-AS1P0C7T7 363 aa9.39□□□□□ -0.91
SNHG4-208ENST00000514110 ARSBP15848 533 aa9.39□□□□□ -0.91
SNHG4-208ENST00000514110 VEGFCP49767 419 aa9.39□□□□□ -0.91
SNHG4-208ENST00000514110 TPPP2P59282 170 aa9.39□□□□□ -0.91
SNHG4-208ENST00000514110 RPS16P62249 146 aaKnown RBP9.39□□□□□ -0.91
SNHG4-208ENST00000514110 IRF3Q14653 427 aa9.39□□□□□ -0.91
SNHG4-208ENST00000514110 ZNF562Q6V9R5 426 aa9.39□□□□□ -0.91
SNHG4-208ENST00000514110 OR6Q1Q8NGQ2 317 aa9.39□□□□□ -0.91
SNHG4-208ENST00000514110 EDARADDQ8WWZ3 215 aa9.39□□□□□ -0.91
SNHG4-208ENST00000514110 PTX4Q96A99 478 aa9.39□□□□□ -0.91
SNHG4-208ENST00000514110 RHOVQ96L33 236 aa9.39□□□□□ -0.91
SNHG4-208ENST00000514110 URM1Q9BTM9 101 aaKnown RBP9.39□□□□□ -0.91
SNHG4-208ENST00000514110 PECRQ9BY49 303 aa9.39□□□□□ -0.91
SNHG4-208ENST00000514110 GHITMQ9H3K2 345 aa9.39□□□□□ -0.91
SNHG4-208ENST00000514110 HSF4Q9ULV5 492 aa9.39□□□□□ -0.91
SNHG4-208ENST00000514110 AK6Q9Y3D8 172 aaKnown RBP9.39□□□□□ -0.91
SNHG4-208ENST00000514110 SORL1Q92673 2214 aa9.38□□□□□ -0.91
SNHG4-208ENST00000514110 CPEP16870 476 aa9.38□□□□□ -0.91
SNHG4-208ENST00000514110 CLDN12P56749 244 aa9.38□□□□□ -0.91
SNHG4-208ENST00000514110 RPS25P62851 125 aaKnown RBP9.38□□□□□ -0.91
SNHG4-208ENST00000514110 SSBP2P81877 361 aaPredicted RBP9.38□□□□□ -0.91
SNHG4-208ENST00000514110 PITPNAQ00169 270 aa9.38□□□□□ -0.91
SNHG4-208ENST00000514110 CASC10Q5T4H9 136 aa9.38□□□□□ -0.91
SNHG4-208ENST00000514110 HAPLN4Q86UW8 402 aa9.38□□□□□ -0.91
SNHG4-208ENST00000514110 MUC7Q8TAX7 377 aa9.38□□□□□ -0.91
SNHG4-208ENST00000514110 UFD1Q92890 307 aa9.38□□□□□ -0.91
SNHG4-208ENST00000514110 FLYWCH2Q96CP2 140 aaKnown RBP9.38□□□□□ -0.91
SNHG4-208ENST00000514110 ARHGAP5-AS1Q96IT6 56 aa9.38□□□□□ -0.91
SNHG4-208ENST00000514110 TSNAXQ99598 290 aaKnown RBP9.38□□□□□ -0.91
SNHG4-208ENST00000514110 PLGRKTQ9HBL7 147 aa9.38□□□□□ -0.91
SNHG4-208ENST00000514110 C12orf4Q9NQ89 552 aa9.38□□□□□ -0.91
SNHG4-208ENST00000514110 ZNF221Q9UK13 617 aa9.38□□□□□ -0.91
SNHG4-208ENST00000514110 MGAT4AQ9UM21 535 aa9.38□□□□□ -0.91
SNHG4-208ENST00000514110 SLC25A17O43808 307 aa9.37□□□□□ -0.91
SNHG4-208ENST00000514110 SPDEFO95238 335 aa9.37□□□□□ -0.91
SNHG4-208ENST00000514110 TRGV3P03979 118 aa9.37□□□□□ -0.91
SNHG4-208ENST00000514110 TFAP2AP05549 437 aa9.37□□□□□ -0.91
SNHG4-208ENST00000514110 PLA2G7Q13093 441 aa9.37□□□□□ -0.91
SNHG4-208ENST00000514110 TPBGQ13641 420 aa9.37□□□□□ -0.91
SNHG4-208ENST00000514110 FXYD3Q14802 87 aa9.37□□□□□ -0.91
SNHG4-208ENST00000514110 RAB11BQ15907 218 aa9.37□□□□□ -0.91
SNHG4-208ENST00000514110 SRSF7Q16629 238 aaKnown RBP eCLIP9.37□□□□□ -0.91
SNHG4-208ENST00000514110 PLAC9Q5JTB6 97 aa9.37□□□□□ -0.91
SNHG4-208ENST00000514110 GRPEL2Q8TAA5 225 aa9.37□□□□□ -0.91
SNHG4-208ENST00000514110 OR4C12Q96R67 309 aa9.37□□□□□ -0.91
SNHG4-208ENST00000514110 CMSS1Q9BQ75 279 aaKnown RBP9.37□□□□□ -0.91
SNHG4-208ENST00000514110 SLA2Q9H6Q3 261 aa9.37□□□□□ -0.91
SNHG4-208ENST00000514110 SCN3BQ9NY72 215 aa9.37□□□□□ -0.91
SNHG4-208ENST00000514110 RDH8Q9NYR8 311 aa9.37□□□□□ -0.91
SNHG4-208ENST00000514110 TRDCB7Z8K6 153 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms