RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 PRO0461Q9UI25 63 aa2.8□□□□□ -1.96
CALCOCO2-222ENST00000514006 ZNF443Q9Y2A4 671 aaPredicted RBP2.8□□□□□ -1.96
CALCOCO2-222ENST00000514006 CARHSP1Q9Y2V2 147 aaKnown RBP2.8□□□□□ -1.96
CALCOCO2-222ENST00000514006 CACNA1SQ13698 1873 aa2.79□□□□□ -1.96
CALCOCO2-222ENST00000514006 PLCH2O75038 1416 aa2.79□□□□□ -1.96
CALCOCO2-222ENST00000514006 IGKV1D-37A0A075B6S9 117 aa2.79□□□□□ -1.96
CALCOCO2-222ENST00000514006 TMEM114B3SHH9 223 aa2.79□□□□□ -1.96
CALCOCO2-222ENST00000514006 C15orf65H3BRN8 121 aa2.79□□□□□ -1.96
CALCOCO2-222ENST00000514006 M0R381 172 aa2.79□□□□□ -1.96
CALCOCO2-222ENST00000514006 GSTZ1O43708 216 aaPredicted RBP2.79□□□□□ -1.96
CALCOCO2-222ENST00000514006 PRB2P02812 416 aaPredicted RBP2.79□□□□□ -1.96
CALCOCO2-222ENST00000514006 OPN1SWP03999 348 aa2.79□□□□□ -1.96
CALCOCO2-222ENST00000514006 UCHL3P15374 230 aa2.79□□□□□ -1.96
CALCOCO2-222ENST00000514006 OPRM1P35372 400 aa2.79□□□□□ -1.96
CALCOCO2-222ENST00000514006 DAPP51397 102 aa2.79□□□□□ -1.96
CALCOCO2-222ENST00000514006 TMEM33P57088 247 aa2.79□□□□□ -1.96
CALCOCO2-222ENST00000514006 DHRS2Q13268 280 aa2.79□□□□□ -1.96
CALCOCO2-222ENST00000514006 HIST3H3Q16695 136 aa2.79□□□□□ -1.96
CALCOCO2-222ENST00000514006 PRR9Q5T870 116 aa2.79□□□□□ -1.96
CALCOCO2-222ENST00000514006 ZFAND2AQ8N6M9 145 aa2.79□□□□□ -1.96
CALCOCO2-222ENST00000514006 UBL4BQ8N7F7 174 aa2.79□□□□□ -1.96
CALCOCO2-222ENST00000514006 CD200R1Q8TD46 325 aa2.79□□□□□ -1.96
CALCOCO2-222ENST00000514006 MS4A6EQ96DS6 147 aa2.79□□□□□ -1.96
CALCOCO2-222ENST00000514006 IMP4Q96G21 291 aaKnown RBP2.79□□□□□ -1.96
CALCOCO2-222ENST00000514006 TBX5Q99593 518 aa2.79□□□□□ -1.96
CALCOCO2-222ENST00000514006 LCTP09848 1927 aa2.79□□□□□ -1.96
CALCOCO2-222ENST00000514006 THSD7AQ9UPZ6 1657 aa2.79□□□□□ -1.96
CALCOCO2-222ENST00000514006 KIF15Q9NS87 1388 aa2.78□□□□□ -1.96
CALCOCO2-222ENST00000514006 TGIF2-C20orf24A0A0A6YYL0 155 aa2.78□□□□□ -1.96
CALCOCO2-222ENST00000514006 A0A1W2PQL4 384 aaPredicted RBP2.78□□□□□ -1.96
CALCOCO2-222ENST00000514006 MT-CO2P00403 227 aa2.78□□□□□ -1.96
CALCOCO2-222ENST00000514006 CD7P09564 240 aa2.78□□□□□ -1.96
CALCOCO2-222ENST00000514006 ATP6V0CP27449 155 aa2.78□□□□□ -1.96
CALCOCO2-222ENST00000514006 SULT1A1P50225 295 aa2.78□□□□□ -1.96
CALCOCO2-222ENST00000514006 FGF12P61328 243 aa2.78□□□□□ -1.96
CALCOCO2-222ENST00000514006 EMX1Q04741 257 aaPredicted RBP2.78□□□□□ -1.96
CALCOCO2-222ENST00000514006 AESQ08117 197 aa2.78□□□□□ -1.96
CALCOCO2-222ENST00000514006 OR2F1Q13607 317 aa2.78□□□□□ -1.96
CALCOCO2-222ENST00000514006 SPOPLQ6IQ16 392 aa2.78□□□□□ -1.96
CALCOCO2-222ENST00000514006 BAP18Q8IXM2 172 aa2.78□□□□□ -1.96
CALCOCO2-222ENST00000514006 EIF4E3Q8N5X7 224 aaKnown RBP2.78□□□□□ -1.96
CALCOCO2-222ENST00000514006 C1QTNF6Q9BXI9 259 aa2.78□□□□□ -1.96
CALCOCO2-222ENST00000514006 ABCG5Q9H222 651 aa2.78□□□□□ -1.96
CALCOCO2-222ENST00000514006 SLC2A9Q9NRM0 540 aa2.78□□□□□ -1.96
CALCOCO2-222ENST00000514006 ASF1BQ9NVP2 202 aa2.78□□□□□ -1.96
CALCOCO2-222ENST00000514006 SLC22A13Q9Y226 551 aa2.78□□□□□ -1.96
CALCOCO2-222ENST00000514006 R4GN34 69 aa2.78□□□□□ -1.96
CALCOCO2-222ENST00000514006 ADGRL1O94910 1474 aa2.77□□□□□ -1.97
CALCOCO2-222ENST00000514006 ATG2BQ96BY7 2078 aa2.77□□□□□ -1.97
CALCOCO2-222ENST00000514006 A0A1W2PQ67 120 aa2.77□□□□□ -1.97
CALCOCO2-222ENST00000514006 A8MWP6 167 aa2.77□□□□□ -1.97
CALCOCO2-222ENST00000514006 GGTLC3B5MD39 225 aa2.77□□□□□ -1.97
CALCOCO2-222ENST00000514006 TRAPPC3O43617 180 aa2.77□□□□□ -1.97
CALCOCO2-222ENST00000514006 TCRBP04435 133 aa2.77□□□□□ -1.97
CALCOCO2-222ENST00000514006 CTXN2P0C2S0 81 aa2.77□□□□□ -1.97
CALCOCO2-222ENST00000514006 RAB5BP61020 215 aa2.77□□□□□ -1.97
CALCOCO2-222ENST00000514006 LSM6P62312 80 aaKnown RBP2.77□□□□□ -1.97
CALCOCO2-222ENST00000514006 BASP1P80723 227 aaKnown RBP2.77□□□□□ -1.97
CALCOCO2-222ENST00000514006 REEP5Q00765 189 aa2.77□□□□□ -1.97
CALCOCO2-222ENST00000514006 TMEM31Q5JXX7 168 aa2.77□□□□□ -1.97
CALCOCO2-222ENST00000514006 HIST2H3PS2Q5TEC6 136 aa2.77□□□□□ -1.97
CALCOCO2-222ENST00000514006 AMMECR1LQ6DCA0 310 aa2.77□□□□□ -1.97
CALCOCO2-222ENST00000514006 SFXN4Q6P4A7 337 aa2.77□□□□□ -1.97
CALCOCO2-222ENST00000514006 C1orf174Q8IYL3 243 aa2.77□□□□□ -1.97
CALCOCO2-222ENST00000514006 ZNF561Q8N587 486 aa2.77□□□□□ -1.97
CALCOCO2-222ENST00000514006 OR5P3Q8WZ94 311 aa2.77□□□□□ -1.97
CALCOCO2-222ENST00000514006 SLC25A44Q96H78 314 aaPredicted RBP2.77□□□□□ -1.97
CALCOCO2-222ENST00000514006 DIRAS2Q96HU8 199 aa2.77□□□□□ -1.97
CALCOCO2-222ENST00000514006 DICER1Q9UPY3 1922 aaKnown RBP2.77□□□□□ -1.97
CALCOCO2-222ENST00000514006 TMED7-TICAM2A0A0A6YYA0 188 aa2.76□□□□□ -1.97
CALCOCO2-222ENST00000514006 DISC1C4P0D8 188 aa2.76□□□□□ -1.97
CALCOCO2-222ENST00000514006 KRT75O95678 551 aa2.76□□□□□ -1.97
CALCOCO2-222ENST00000514006 IFNA6P05013 189 aa2.76□□□□□ -1.97
CALCOCO2-222ENST00000514006 HLA-DQB2P05538 268 aa2.76□□□□□ -1.97
CALCOCO2-222ENST00000514006 NEFHP12036 1026 aa2.76□□□□□ -1.97
CALCOCO2-222ENST00000514006 MARCKSL1P49006 195 aa2.76□□□□□ -1.97
CALCOCO2-222ENST00000514006 TAS2R45P59539 299 aa2.76□□□□□ -1.97
CALCOCO2-222ENST00000514006 BTN3A2P78410 334 aa2.76□□□□□ -1.97
CALCOCO2-222ENST00000514006 PRDX4Q13162 271 aa2.76□□□□□ -1.97
CALCOCO2-222ENST00000514006 SLC9A3R2Q15599 337 aa2.76□□□□□ -1.97
CALCOCO2-222ENST00000514006 ZNF141Q15928 474 aa2.76□□□□□ -1.97
CALCOCO2-222ENST00000514006 KRTAP25-1Q3LHN0 102 aa2.76□□□□□ -1.97
CALCOCO2-222ENST00000514006 MRPL51Q4U2R6 128 aaKnown RBP2.76□□□□□ -1.97
CALCOCO2-222ENST00000514006 C1orf194Q5T5A4 169 aa2.76□□□□□ -1.97
CALCOCO2-222ENST00000514006 SBSNQ6UWP8 590 aa2.76□□□□□ -1.97
CALCOCO2-222ENST00000514006 ZNF550Q7Z398 422 aa2.76□□□□□ -1.97
CALCOCO2-222ENST00000514006 OR51D1Q8NGF3 324 aa2.76□□□□□ -1.97
CALCOCO2-222ENST00000514006 HHLA2Q9UM44 414 aa2.76□□□□□ -1.97
CALCOCO2-222ENST00000514006 DSCAMO60469 2012 aa2.76□□□□□ -1.97
CALCOCO2-222ENST00000514006 CRB1P82279 1406 aa2.76□□□□□ -1.97
CALCOCO2-222ENST00000514006 SPATA31E1Q6ZUB1 1445 aa2.76□□□□□ -1.97
CALCOCO2-222ENST00000514006 SHANK1Q9Y566 2161 aa2.76□□□□□ -1.97
CALCOCO2-222ENST00000514006 IGSF23A1L1A6 192 aa2.75□□□□□ -1.97
CALCOCO2-222ENST00000514006 IGHV3-30-3P0DP02 117 aa2.75□□□□□ -1.97
CALCOCO2-222ENST00000514006 MAP2K4P45985 399 aa2.75□□□□□ -1.97
CALCOCO2-222ENST00000514006 CDK9P50750 372 aaKnown RBP2.75□□□□□ -1.97
CALCOCO2-222ENST00000514006 IDH3GP51553 393 aaPredicted RBP2.75□□□□□ -1.97
CALCOCO2-222ENST00000514006 SPCS3P61009 180 aa2.75□□□□□ -1.97
CALCOCO2-222ENST00000514006 MRPS25P82663 173 aaKnown RBP2.75□□□□□ -1.97
CALCOCO2-222ENST00000514006 PLPPR5Q32ZL2 321 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms