RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 SMIM4Q8WVI0 70 aa7.87□□□□□ -1.15
TOPBP1-209ENST00000513818 EDARADDQ8WWZ3 215 aa7.87□□□□□ -1.15
TOPBP1-209ENST00000513818 JMJD8Q96S16 334 aa7.87□□□□□ -1.15
TOPBP1-209ENST00000513818 GPHA2Q96T91 129 aa7.87□□□□□ -1.15
TOPBP1-209ENST00000513818 SOSTQ9BQB4 213 aa7.87□□□□□ -1.15
TOPBP1-209ENST00000513818 AGMATQ9BSE5 352 aa7.87□□□□□ -1.15
TOPBP1-209ENST00000513818 TINAGL1Q9GZM7 467 aaPredicted RBP7.87□□□□□ -1.15
TOPBP1-209ENST00000513818 FXYD6Q9H0Q3 95 aa7.87□□□□□ -1.15
TOPBP1-209ENST00000513818 NECAP2Q9NVZ3 263 aa7.87□□□□□ -1.15
TOPBP1-209ENST00000513818 VPREB3Q9UKI3 123 aa7.87□□□□□ -1.15
TOPBP1-209ENST00000513818 TCF19Q9Y242 345 aa7.87□□□□□ -1.15
TOPBP1-209ENST00000513818 RBM7Q9Y580 266 aaKnown RBP7.87□□□□□ -1.15
TOPBP1-209ENST00000513818 A3GALT2U3KPV4 340 aa7.87□□□□□ -1.15
TOPBP1-209ENST00000513818 FAM181BA6NEQ2 426 aa7.86□□□□□ -1.15
TOPBP1-209ENST00000513818 SH2D7A6NKC9 451 aaPredicted RBP7.86□□□□□ -1.15
TOPBP1-209ENST00000513818 VGLL3A8MV65 326 aa7.86□□□□□ -1.15
TOPBP1-209ENST00000513818 GABARAPH6UMI1 98 aa7.86□□□□□ -1.15
TOPBP1-209ENST00000513818 M0R1X1 148 aa7.86□□□□□ -1.15
TOPBP1-209ENST00000513818 SULT1C2O00338 296 aa7.86□□□□□ -1.15
TOPBP1-209ENST00000513818 PROP1O75360 226 aa7.86□□□□□ -1.15
TOPBP1-209ENST00000513818 IGKV1D-33P01593 117 aa7.86□□□□□ -1.15
TOPBP1-209ENST00000513818 IGKV1-33P01594 117 aa7.86□□□□□ -1.15
TOPBP1-209ENST00000513818 GAPDHP04406 335 aaKnown RBP7.86□□□□□ -1.15
TOPBP1-209ENST00000513818 RNASE1P07998 156 aaKnown RBP7.86□□□□□ -1.15
TOPBP1-209ENST00000513818 OR5H8P0DN80 308 aa7.86□□□□□ -1.15
TOPBP1-209ENST00000513818 NAT1P18440 290 aa7.86□□□□□ -1.15
TOPBP1-209ENST00000513818 RAB7AP51149 207 aa7.86□□□□□ -1.15
TOPBP1-209ENST00000513818 LSAMPQ13449 338 aa7.86□□□□□ -1.15
TOPBP1-209ENST00000513818 HES1Q14469 280 aa7.86□□□□□ -1.15
TOPBP1-209ENST00000513818 ODF1Q14990 250 aa7.86□□□□□ -1.15
TOPBP1-209ENST00000513818 PYDC2Q56P42 97 aa7.86□□□□□ -1.15
TOPBP1-209ENST00000513818 LY6G6FQ5SQ64 297 aa7.86□□□□□ -1.15
TOPBP1-209ENST00000513818 OR8H3Q8N146 312 aa7.86□□□□□ -1.15
TOPBP1-209ENST00000513818 OR4D10Q8NGI6 311 aa7.86□□□□□ -1.15
TOPBP1-209ENST00000513818 SECTM1Q8WVN6 248 aa7.86□□□□□ -1.15
TOPBP1-209ENST00000513818 FCAMRQ8WWV6 532 aa7.86□□□□□ -1.15
TOPBP1-209ENST00000513818 NABP2Q9BQ15 211 aa7.86□□□□□ -1.15
TOPBP1-209ENST00000513818 TOLLIPQ9H0E2 274 aa7.86□□□□□ -1.15
TOPBP1-209ENST00000513818 DPAGT1Q9H3H5 408 aa7.86□□□□□ -1.15
TOPBP1-209ENST00000513818 SDHAF2Q9NX18 166 aa7.86□□□□□ -1.15
TOPBP1-209ENST00000513818 MTFP1Q9UDX5 166 aa7.86□□□□□ -1.15
TOPBP1-209ENST00000513818 A0A0A6YYJ9 748 aa7.85□□□□□ -1.15
TOPBP1-209ENST00000513818 A6NDX4 124 aa7.85□□□□□ -1.15
TOPBP1-209ENST00000513818 OOSP1A8MZH6 123 aa7.85□□□□□ -1.15
TOPBP1-209ENST00000513818 TRIM77I1YAP6 450 aa7.85□□□□□ -1.15
TOPBP1-209ENST00000513818 ITGB1BP1O14713 200 aa7.85□□□□□ -1.15
TOPBP1-209ENST00000513818 RAB29O14966 203 aa7.85□□□□□ -1.15
TOPBP1-209ENST00000513818 RBBP9O75884 186 aa7.85□□□□□ -1.15
TOPBP1-209ENST00000513818 TUSC2O75896 110 aa7.85□□□□□ -1.15
TOPBP1-209ENST00000513818 PPYP01298 95 aa7.85□□□□□ -1.15
TOPBP1-209ENST00000513818 CD3DP04234 171 aa7.85□□□□□ -1.15
TOPBP1-209ENST00000513818 CTXN2P0C2S0 81 aa7.85□□□□□ -1.15
TOPBP1-209ENST00000513818 LUMP51884 338 aaPredicted RBP7.85□□□□□ -1.15
TOPBP1-209ENST00000513818 TAS2R46P59540 309 aa7.85□□□□□ -1.15
TOPBP1-209ENST00000513818 ACTBP60709 375 aa7.85□□□□□ -1.15
TOPBP1-209ENST00000513818 ACTG1P63261 375 aa7.85□□□□□ -1.15
TOPBP1-209ENST00000513818 OR2B11Q5JQS5 317 aa7.85□□□□□ -1.15
TOPBP1-209ENST00000513818 CCDC144NLQ6NUI1 221 aa7.85□□□□□ -1.15
TOPBP1-209ENST00000513818 TMEM86BQ8N661 226 aa7.85□□□□□ -1.15
TOPBP1-209ENST00000513818 OR5R1Q8NH85 324 aa7.85□□□□□ -1.15
TOPBP1-209ENST00000513818 ZNF2Q9BSG1 426 aaPredicted RBP7.85□□□□□ -1.15
TOPBP1-209ENST00000513818 SRRQ9GZT4 340 aa7.85□□□□□ -1.15
TOPBP1-209ENST00000513818 BATF3Q9NR55 127 aa7.85□□□□□ -1.15
TOPBP1-209ENST00000513818 CCL28Q9NRJ3 127 aa7.85□□□□□ -1.15
TOPBP1-209ENST00000513818 PIPOXQ9P0Z9 390 aa7.85□□□□□ -1.15
TOPBP1-209ENST00000513818 ZNF221Q9UK13 617 aa7.85□□□□□ -1.15
TOPBP1-209ENST00000513818 OR2W1Q9Y3N9 320 aa7.85□□□□□ -1.15
TOPBP1-209ENST00000513818 POMT1Q9Y6A1 747 aa7.85□□□□□ -1.15
TOPBP1-209ENST00000513818 ATRQ13535 2644 aa7.84□□□□□ -1.15
TOPBP1-209ENST00000513818 CLDN34H7C241 214 aa7.84□□□□□ -1.15
TOPBP1-209ENST00000513818 CTDSPLO15194 276 aa7.84□□□□□ -1.15
TOPBP1-209ENST00000513818 TNFSF12O43508 249 aa7.84□□□□□ -1.15
TOPBP1-209ENST00000513818 DIRAS3O95661 229 aa7.84□□□□□ -1.15
TOPBP1-209ENST00000513818 IGLV2-14P01704 120 aa7.84□□□□□ -1.15
TOPBP1-209ENST00000513818 CT45A6P0DMU7 189 aa7.84□□□□□ -1.15
TOPBP1-209ENST00000513818 CT45A5P0DMU8 189 aa7.84□□□□□ -1.15
TOPBP1-209ENST00000513818 CT45A7P0DMV0 189 aa7.84□□□□□ -1.15
TOPBP1-209ENST00000513818 TMEM11P17152 192 aa7.84□□□□□ -1.15
TOPBP1-209ENST00000513818 BRS3P32247 399 aa7.84□□□□□ -1.15
TOPBP1-209ENST00000513818 DYNLT3P51808 116 aa7.84□□□□□ -1.15
TOPBP1-209ENST00000513818 ARHGDIBP52566 201 aa7.84□□□□□ -1.15
TOPBP1-209ENST00000513818 PPP5CP53041 499 aa7.84□□□□□ -1.15
TOPBP1-209ENST00000513818 HERV-K104P61576 105 aa7.84□□□□□ -1.15
TOPBP1-209ENST00000513818 MRPS10P82664 201 aaKnown RBP7.84□□□□□ -1.15
TOPBP1-209ENST00000513818 DYRK1AQ13627 763 aa7.84□□□□□ -1.15
TOPBP1-209ENST00000513818 RNASE10Q5GAN6 216 aaKnown RBP7.84□□□□□ -1.15
TOPBP1-209ENST00000513818 SPANXN2Q5MJ10 180 aa7.84□□□□□ -1.15
TOPBP1-209ENST00000513818 ZNF660Q6AZW8 331 aaPredicted RBP7.84□□□□□ -1.15
TOPBP1-209ENST00000513818 DHRS7BQ6IAN0 325 aaPredicted RBP7.84□□□□□ -1.15
TOPBP1-209ENST00000513818 OVCH2Q7RTZ1 564 aa7.84□□□□□ -1.15
TOPBP1-209ENST00000513818 MFSD4AQ8N468 514 aa7.84□□□□□ -1.15
TOPBP1-209ENST00000513818 ZNF383Q8NA42 475 aa7.84□□□□□ -1.15
TOPBP1-209ENST00000513818 C15orf40Q8WUR7 153 aa7.84□□□□□ -1.15
TOPBP1-209ENST00000513818 S1PR3Q99500 378 aa7.84□□□□□ -1.15
TOPBP1-209ENST00000513818 SLC25A33Q9BSK2 321 aa7.84□□□□□ -1.15
TOPBP1-209ENST00000513818 C19orf24Q9BVV8 132 aa7.84□□□□□ -1.15
TOPBP1-209ENST00000513818 ZFAND3Q9H8U3 227 aa7.84□□□□□ -1.15
TOPBP1-209ENST00000513818 PTTG2Q9NZH5 202 aa7.84□□□□□ -1.15
TOPBP1-209ENST00000513818 RBMX2Q9Y388 322 aaKnown RBP7.84□□□□□ -1.15
TOPBP1-209ENST00000513818 OR5H14A6NHG9 310 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms