RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 TGIF2LYQ8IUE0 185 aa6.92□□□□□ -1.3
RNF4-220ENST00000513578 BAP18Q8IXM2 172 aa6.92□□□□□ -1.3
RNF4-220ENST00000513578 ZCCHC24Q8N2G6 241 aaKnown RBP6.92□□□□□ -1.3
RNF4-220ENST00000513578 FAM216BQ8N7L0 139 aa6.92□□□□□ -1.3
RNF4-220ENST00000513578 C8orf31Q8N9H6 132 aa6.92□□□□□ -1.3
RNF4-220ENST00000513578 ZNF439Q8NDP4 499 aa6.92□□□□□ -1.3
RNF4-220ENST00000513578 DEFB108BQ8NET1 73 aa6.92□□□□□ -1.3
RNF4-220ENST00000513578 OR51H1Q8NH63 302 aa6.92□□□□□ -1.3
RNF4-220ENST00000513578 RFESDQ8TAC1 157 aa6.92□□□□□ -1.3
RNF4-220ENST00000513578 ITLN2Q8WWU7 325 aaPredicted RBP6.92□□□□□ -1.3
RNF4-220ENST00000513578 ZNF471Q9BX82 626 aaPredicted RBP6.92□□□□□ -1.3
RNF4-220ENST00000513578 ARV1Q9H2C2 271 aa6.92□□□□□ -1.3
RNF4-220ENST00000513578 GAL3ST2Q9H3Q3 398 aa6.92□□□□□ -1.3
RNF4-220ENST00000513578 CBLN4Q9NTU7 201 aa6.92□□□□□ -1.3
RNF4-220ENST00000513578 DCAF16Q9NXF7 216 aa6.92□□□□□ -1.3
RNF4-220ENST00000513578 GNG12Q9UBI6 72 aa6.92□□□□□ -1.3
RNF4-220ENST00000513578 SLC25A10Q9UBX3 287 aaPredicted RBP6.92□□□□□ -1.3
RNF4-220ENST00000513578 RCL1Q9Y2P8 373 aaKnown RBP6.92□□□□□ -1.3
RNF4-220ENST00000513578 MMP24Q9Y5R2 645 aa6.92□□□□□ -1.3
RNF4-220ENST00000513578 FBN3Q75N90 2809 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 YLPM1P49750 1951 aaKnown RBP6.91□□□□□ -1.3
RNF4-220ENST00000513578 ANKHD1Q8IWZ3 2542 aaKnown RBP6.91□□□□□ -1.3
RNF4-220ENST00000513578 UBR5O95071 2799 aaPredicted RBP6.91□□□□□ -1.3
RNF4-220ENST00000513578 COL6A6A6NMZ7 2263 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 TRBV23-1A0A0A0MS06 115 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 IGHV3-43A0A0B4J1X8 118 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 A0A0G2JRQ6 117 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 A0A1B0GW55 424 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 TOR1AO14656 332 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 TMPRSS2O15393 492 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 NDUFB3O43676 98 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 ZG16O60844 167 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 PROP1O75360 226 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 JTBO76095 146 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 SPDEFO95238 335 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 IGKV1-5P01602 117 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 NMBP08949 121 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 DUX4L2P0CJ85 424 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 DUX4L3P0CJ86 424 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 DUX4L4P0CJ87 422 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 DUX4L5P0CJ88 424 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 DUX4L6P0CJ89 424 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 DUX4L7P0CJ90 424 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 IGHV3-43DP0DP04 118 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 RRASP10301 218 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 SELLP14151 372 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 DAOP14920 347 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 DUTP33316 252 aaKnown RBP6.91□□□□□ -1.3
RNF4-220ENST00000513578 GPR12P47775 334 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 BRWD1-AS2P59051 145 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 TAS2R30P59541 319 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 RPL30P62888 115 aaKnown RBP6.91□□□□□ -1.3
RNF4-220ENST00000513578 HFEQ30201 348 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 AARDQ4LEZ3 155 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 LRRC10Q5BKY1 277 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 DUX4L9Q6RFH8 374 aaPredicted RBP6.91□□□□□ -1.3
RNF4-220ENST00000513578 ALKAL2Q6UX46 152 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 DTX2Q86UW9 622 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 FGFRL1Q8N441 504 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 UBAC2Q8NBM4 344 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 ZNF596Q8TC21 504 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 NEU4Q8WWR8 484 aaPredicted RBP6.91□□□□□ -1.3
RNF4-220ENST00000513578 CCL17Q92583 94 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 ADTRPQ96IZ2 230 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 RAB40CQ96S21 281 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 GPHA2Q96T91 129 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 SLC25A31Q9H0C2 315 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 RAB1BQ9H0U4 201 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 IFI27L2Q9H2X8 130 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 LYRM2Q9NU23 88 aaPredicted RBP6.91□□□□□ -1.3
RNF4-220ENST00000513578 DUX4Q9UBX2 424 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 RPUSD1Q9UJJ7 312 aaKnown RBP6.91□□□□□ -1.3
RNF4-220ENST00000513578 RNF150Q9ULK6 438 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 PSG11Q9UQ72 335 aa6.91□□□□□ -1.3
RNF4-220ENST00000513578 A0A087X0M5 115 aa6.9□□□□□ -1.3
RNF4-220ENST00000513578 A0A1B0GX30 115 aa6.9□□□□□ -1.3
RNF4-220ENST00000513578 LEUTXA8MZ59 168 aa6.9□□□□□ -1.3
RNF4-220ENST00000513578 RAB29O14966 203 aa6.9□□□□□ -1.3
RNF4-220ENST00000513578 ST8SIA5O15466 376 aa6.9□□□□□ -1.3
RNF4-220ENST00000513578 FGF16O43320 207 aa6.9□□□□□ -1.3
RNF4-220ENST00000513578 FCN3O75636 299 aa6.9□□□□□ -1.3
RNF4-220ENST00000513578 LY86O95711 162 aa6.9□□□□□ -1.3
RNF4-220ENST00000513578 SCGB1D2O95969 90 aa6.9□□□□□ -1.3
RNF4-220ENST00000513578 HPRT1P00492 218 aa6.9□□□□□ -1.3
RNF4-220ENST00000513578 IGHV2-70P01814 119 aa6.9□□□□□ -1.3
RNF4-220ENST00000513578 PRB1P04280 392 aa6.9□□□□□ -1.3
RNF4-220ENST00000513578 DANCRP0C864 163 aa6.9□□□□□ -1.3
RNF4-220ENST00000513578 IGFBP2P18065 325 aa6.9□□□□□ -1.3
RNF4-220ENST00000513578 GNLYP22749 145 aa6.9□□□□□ -1.3
RNF4-220ENST00000513578 ZNF134P52741 427 aa6.9□□□□□ -1.3
RNF4-220ENST00000513578 TMEM33P57088 247 aa6.9□□□□□ -1.3
RNF4-220ENST00000513578 BAXQ07812 192 aa6.9□□□□□ -1.3
RNF4-220ENST00000513578 SNTB1Q13884 538 aaKnown RBP6.9□□□□□ -1.3
RNF4-220ENST00000513578 MIDNQ504T8 468 aa6.9□□□□□ -1.3
RNF4-220ENST00000513578 CT45A1Q5HYN5 189 aa6.9□□□□□ -1.3
RNF4-220ENST00000513578 CXorf66Q5JRM2 361 aaPredicted RBP6.9□□□□□ -1.3
RNF4-220ENST00000513578 EIF5AL1Q6IS14 154 aaKnown RBP6.9□□□□□ -1.3
RNF4-220ENST00000513578 FAM53AQ6NSI3 398 aaPredicted RBP6.9□□□□□ -1.3
RNF4-220ENST00000513578 HEPN1Q6WQI6 88 aa6.9□□□□□ -1.3
RNF4-220ENST00000513578 Q6ZRM9 215 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms