RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 DHRS2Q13268 280 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 RAB32Q13637 225 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 UBE2DNLQ8IWF7 75 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 CELF2-AS1Q8N7Q2 184 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 WDR89Q96FK6 387 aaPredicted RBP3.63□□□□□ -1.83
VCAN-209ENST00000513016 SRRQ9GZT4 340 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 SLC2A9Q9NRM0 540 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 F5P12259 2224 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 OR4C46A6NHA9 309 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 IQCF6A8MYZ5 107 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 OOSP1A8MZH6 123 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 H7C1H1 209 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 LMX1BO60663 402 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 CD5P06127 495 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 SCGB1C2P0DMR2 95 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 NHLH2Q02577 135 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 Q6ZS92 163 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 ZNF429Q86V71 674 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 OR4D11Q8NGI4 311 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 OR5P3Q8WZ94 311 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 FAM210BQ96KR6 192 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 TXNDC17Q9BRA2 123 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 RNF167Q9H6Y7 350 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 LINC00312Q9Y6C7 94 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 TRBV5-3A0A0A0MS03 114 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 TRAV39A0A0B4J263 110 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 PRSS1P07477 247 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 RFPL3SP0C7P2 107 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 TRGC1P0CF51 173 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 PSG2P11465 335 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 OR10J1P30954 320 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 FCGR2BP31994 310 aaPredicted RBP3.63□□□□□ -1.83
VCAN-209ENST00000513016 TMEM177Q53S58 311 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 PAPPA-AS1Q5QFB9 102 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 LEMD1Q68G75 181 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 TPRX1Q8N7U7 411 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 LINC01356Q8N9X3 169 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 DRAXINQ8NBI3 349 aaPredicted RBP3.63□□□□□ -1.83
VCAN-209ENST00000513016 TNFRSF14Q92956 283 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 OPN4Q9UHM6 478 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 TTC3P53804 2025 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 MYH15Q9Y2K3 1946 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 MELTFP08582 738 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 ZNF146Q15072 292 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 BAK1Q16611 211 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 DEFB121Q5J5C9 76 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 DPPA3Q6W0C5 159 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 WDFY1Q8IWB7 410 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 STHQ8IWL8 128 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 PRSS27Q9BQR3 290 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 NEURL2Q9BR09 285 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 NAT8BQ9UHF3 227 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 WSB1Q9Y6I7 421 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 AP4M1O00189 453 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 GUK1Q16774 197 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 MMP26Q9NRE1 261 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 TCHHQ07283 1943 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 CTXND1A0A1B0GTU2 59 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 A0A1W2PPQ1 181 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 MFNGO00587 321 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 ZIC3O60481 467 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 GPX1P07203 203 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 APELAP0DMC3 54 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 CD33P20138 364 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 CRYBB2P43320 205 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 CLDN18P56856 261 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 RANP62826 216 aaKnown RBP3.63□□□□□ -1.83
VCAN-209ENST00000513016 PNRC1Q12796 327 aaPredicted RBP3.63□□□□□ -1.83
VCAN-209ENST00000513016 HCP5Q6MZN7 132 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 FAM159AQ6UWV7 190 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 ZNF705AQ6ZN79 300 aaPredicted RBP3.63□□□□□ -1.83
VCAN-209ENST00000513016 SSMEM1Q8WWF3 244 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 AP5S1Q9NUS5 200 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 TRAPPC1Q9Y5R8 145 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 ELOA3CA0A087WX78 387 aaPredicted RBP3.62□□□□□ -1.83
VCAN-209ENST00000513016 CELA3AP09093 270 aa3.62□□□□□ -1.83
VCAN-209ENST00000513016 CD1BP29016 333 aa3.62□□□□□ -1.83
VCAN-209ENST00000513016 DLX6P56179 175 aa3.62□□□□□ -1.83
VCAN-209ENST00000513016 TMEM50BP56557 158 aa3.62□□□□□ -1.83
VCAN-209ENST00000513016 RNF151Q2KHN1 245 aa3.62□□□□□ -1.83
VCAN-209ENST00000513016 UQCC3Q6UW78 93 aa3.62□□□□□ -1.83
VCAN-209ENST00000513016 ACP7Q6ZNF0 438 aa3.62□□□□□ -1.83
VCAN-209ENST00000513016 OR10G8Q8NGN5 311 aa3.62□□□□□ -1.83
VCAN-209ENST00000513016 ITLN2Q8WWU7 325 aaPredicted RBP3.62□□□□□ -1.83
VCAN-209ENST00000513016 ARPC1AQ92747 370 aa3.62□□□□□ -1.83
VCAN-209ENST00000513016 TMEM101Q96IK0 257 aa3.62□□□□□ -1.83
VCAN-209ENST00000513016 FBXL7Q9UJT9 491 aa3.62□□□□□ -1.83
VCAN-209ENST00000513016 A0A1W2PRX2 142 aa3.62□□□□□ -1.83
VCAN-209ENST00000513016 CLDN34H7C241 214 aa3.62□□□□□ -1.83
VCAN-209ENST00000513016 NPFFO15130 113 aa3.62□□□□□ -1.83
VCAN-209ENST00000513016 LINC00869P0C866 280 aa3.62□□□□□ -1.83
VCAN-209ENST00000513016 FAM157CP0CG43 387 aa3.62□□□□□ -1.83
VCAN-209ENST00000513016 PGA5P0DJD9 388 aa3.62□□□□□ -1.83
VCAN-209ENST00000513016 LHX2P50458 406 aa3.62□□□□□ -1.83
VCAN-209ENST00000513016 RND2P52198 227 aa3.62□□□□□ -1.83
VCAN-209ENST00000513016 SUCLG1P53597 346 aaKnown RBP3.62□□□□□ -1.83
VCAN-209ENST00000513016 GVQW1Q8N7I0 195 aa3.62□□□□□ -1.83
VCAN-209ENST00000513016 ANAPC16Q96DE5 110 aa3.62□□□□□ -1.83
VCAN-209ENST00000513016 OR10C1Q96KK4 312 aa3.62□□□□□ -1.83
VCAN-209ENST00000513016 CDK5RAP2Q96SN8 1893 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms