RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 CCDC90BQ9GZT6 254 aa9.72□□□□□ -0.85
VEGFA-216ENST00000512683 SLA2Q9H6Q3 261 aa9.72□□□□□ -0.85
VEGFA-216ENST00000512683 MGAT4AQ9UM21 535 aa9.72□□□□□ -0.85
VEGFA-216ENST00000512683 AK6Q9Y3D8 172 aaKnown RBP9.72□□□□□ -0.85
VEGFA-216ENST00000512683 RRHO14718 337 aa9.71□□□□□ -0.86
VEGFA-216ENST00000512683 GP9P14770 177 aa9.71□□□□□ -0.86
VEGFA-216ENST00000512683 SPNP16150 400 aa9.71□□□□□ -0.86
VEGFA-216ENST00000512683 TMEM50BP56557 158 aa9.71□□□□□ -0.86
VEGFA-216ENST00000512683 MOGAT2Q3SYC2 334 aa9.71□□□□□ -0.86
VEGFA-216ENST00000512683 IZUMO2Q6UXV1 221 aa9.71□□□□□ -0.86
VEGFA-216ENST00000512683 RHOVQ96L33 236 aa9.71□□□□□ -0.86
VEGFA-216ENST00000512683 HDHD3Q9BSH5 251 aaPredicted RBP9.71□□□□□ -0.86
VEGFA-216ENST00000512683 PARP12Q9H0J9 701 aaKnown RBP9.71□□□□□ -0.86
VEGFA-216ENST00000512683 IFI27L2Q9H2X8 130 aa9.71□□□□□ -0.86
VEGFA-216ENST00000512683 PLEKHJ1Q9NW61 149 aa9.71□□□□□ -0.86
VEGFA-216ENST00000512683 SLC23A1Q9UHI7 598 aa9.71□□□□□ -0.86
VEGFA-216ENST00000512683 SAA2-SAA4A0A096LPE2 208 aa9.7□□□□□ -0.86
VEGFA-216ENST00000512683 TRBV6-6A0A0A6YYG2 114 aa9.7□□□□□ -0.86
VEGFA-216ENST00000512683 LDLRAD4O15165 306 aa9.7□□□□□ -0.86
VEGFA-216ENST00000512683 ARL6IP5O75915 188 aa9.7□□□□□ -0.86
VEGFA-216ENST00000512683 GSTP1P09211 210 aaKnown RBP9.7□□□□□ -0.86
VEGFA-216ENST00000512683 FRMD6-AS1P0C7T7 363 aa9.7□□□□□ -0.86
VEGFA-216ENST00000512683 SAA2P0DJI9 122 aaPredicted RBP9.7□□□□□ -0.86
VEGFA-216ENST00000512683 ARSBP15848 533 aa9.7□□□□□ -0.86
VEGFA-216ENST00000512683 PSMA1P25786 263 aaKnown RBP9.7□□□□□ -0.86
VEGFA-216ENST00000512683 CNTFRP26992 372 aa9.7□□□□□ -0.86
VEGFA-216ENST00000512683 CALRP27797 417 aaKnown RBP9.7□□□□□ -0.86
VEGFA-216ENST00000512683 RANBP1P43487 201 aa9.7□□□□□ -0.86
VEGFA-216ENST00000512683 CLDN12P56749 244 aa9.7□□□□□ -0.86
VEGFA-216ENST00000512683 SSX1Q16384 188 aa9.7□□□□□ -0.86
VEGFA-216ENST00000512683 MOB1BQ7L9L4 216 aa9.7□□□□□ -0.86
VEGFA-216ENST00000512683 OR5AN1Q8NGI8 311 aa9.7□□□□□ -0.86
VEGFA-216ENST00000512683 IL1F10Q8WWZ1 152 aa9.7□□□□□ -0.86
VEGFA-216ENST00000512683 TMEM68Q96MH6 324 aa9.7□□□□□ -0.86
VEGFA-216ENST00000512683 OR5B12Q96R08 314 aa9.7□□□□□ -0.86
VEGFA-216ENST00000512683 PLGRKTQ9HBL7 147 aa9.7□□□□□ -0.86
VEGFA-216ENST00000512683 AK3Q9UIJ7 227 aa9.7□□□□□ -0.86
VEGFA-216ENST00000512683 HSF4Q9ULV5 492 aa9.7□□□□□ -0.86
VEGFA-216ENST00000512683 SORL1Q92673 2214 aa9.7□□□□□ -0.86
VEGFA-216ENST00000512683 A0A1W2PN81 502 aa9.69□□□□□ -0.86
VEGFA-216ENST00000512683 ERICH4A6NGS2 130 aa9.69□□□□□ -0.86
VEGFA-216ENST00000512683 H3BUA1 57 aa9.69□□□□□ -0.86
VEGFA-216ENST00000512683 HSPA12AO43301 675 aa9.69□□□□□ -0.86
VEGFA-216ENST00000512683 SPDEFO95238 335 aa9.69□□□□□ -0.86
VEGFA-216ENST00000512683 BRI3O95415 125 aa9.69□□□□□ -0.86
VEGFA-216ENST00000512683 TFAP2AP05549 437 aa9.69□□□□□ -0.86
VEGFA-216ENST00000512683 CT45A6P0DMU7 189 aa9.69□□□□□ -0.86
VEGFA-216ENST00000512683 CT45A5P0DMU8 189 aa9.69□□□□□ -0.86
VEGFA-216ENST00000512683 CT45A7P0DMV0 189 aa9.69□□□□□ -0.86
VEGFA-216ENST00000512683 EGR2P11161 476 aaPredicted RBP9.69□□□□□ -0.86
VEGFA-216ENST00000512683 ZP3P21754 424 aa9.69□□□□□ -0.86
VEGFA-216ENST00000512683 CHRNA7P36544 502 aa9.69□□□□□ -0.86
VEGFA-216ENST00000512683 PITPNAQ00169 270 aa9.69□□□□□ -0.86
VEGFA-216ENST00000512683 PLA2G7Q13093 441 aa9.69□□□□□ -0.86
VEGFA-216ENST00000512683 TBCEQ15813 527 aaPredicted RBP9.69□□□□□ -0.86
VEGFA-216ENST00000512683 RAB11BQ15907 218 aa9.69□□□□□ -0.86
VEGFA-216ENST00000512683 C2orf76Q3KRA6 126 aa9.69□□□□□ -0.86
VEGFA-216ENST00000512683 ACTBL2Q562R1 376 aa9.69□□□□□ -0.86
VEGFA-216ENST00000512683 PPP1R27Q86WC6 154 aa9.69□□□□□ -0.86
VEGFA-216ENST00000512683 SETD6Q8TBK2 473 aa9.69□□□□□ -0.86
VEGFA-216ENST00000512683 EDARADDQ8WWZ3 215 aa9.69□□□□□ -0.86
VEGFA-216ENST00000512683 FAM3DQ96BQ1 224 aa9.69□□□□□ -0.86
VEGFA-216ENST00000512683 CNBD2Q96M20 576 aa9.69□□□□□ -0.86
VEGFA-216ENST00000512683 TSNAXQ99598 290 aaKnown RBP9.69□□□□□ -0.86
VEGFA-216ENST00000512683 TM2D3Q9BRN9 247 aa9.69□□□□□ -0.86
VEGFA-216ENST00000512683 AGMATQ9BSE5 352 aa9.69□□□□□ -0.86
VEGFA-216ENST00000512683 URM1Q9BTM9 101 aaKnown RBP9.69□□□□□ -0.86
VEGFA-216ENST00000512683 VCX3BQ9H321 246 aa9.69□□□□□ -0.86
VEGFA-216ENST00000512683 CHMP1AQ9HD42 196 aaPredicted RBP9.69□□□□□ -0.86
VEGFA-216ENST00000512683 RANGRFQ9HD47 186 aaPredicted RBP9.69□□□□□ -0.86
VEGFA-216ENST00000512683 PALMDQ9NP74 551 aa9.69□□□□□ -0.86
VEGFA-216ENST00000512683 ACOT13Q9NPJ3 140 aa9.69□□□□□ -0.86
VEGFA-216ENST00000512683 STUB1Q9UNE7 303 aa9.69□□□□□ -0.86
VEGFA-216ENST00000512683 WASHC3Q9Y3C0 194 aa9.69□□□□□ -0.86
VEGFA-216ENST00000512683 A0A0G2JLM5 398 aa9.68□□□□□ -0.86
VEGFA-216ENST00000512683 SHISA3A0PJX4 238 aa9.68□□□□□ -0.86
VEGFA-216ENST00000512683 H0YJW9 148 aa9.68□□□□□ -0.86
VEGFA-216ENST00000512683 ST8SIA5O15466 376 aa9.68□□□□□ -0.86
VEGFA-216ENST00000512683 SOX15O60248 233 aa9.68□□□□□ -0.86
VEGFA-216ENST00000512683 PROP1O75360 226 aa9.68□□□□□ -0.86
VEGFA-216ENST00000512683 HSPA13P48723 471 aa9.68□□□□□ -0.86
VEGFA-216ENST00000512683 VEGFCP49767 419 aa9.68□□□□□ -0.86
VEGFA-216ENST00000512683 PLGLAQ15195 96 aa9.68□□□□□ -0.86
VEGFA-216ENST00000512683 RPL39P5Q59GN2 51 aa9.68□□□□□ -0.86
VEGFA-216ENST00000512683 PLAC9Q5JTB6 97 aa9.68□□□□□ -0.86
VEGFA-216ENST00000512683 PTX4Q96A99 478 aa9.68□□□□□ -0.86
VEGFA-216ENST00000512683 ARHGAP5-AS1Q96IT6 56 aa9.68□□□□□ -0.86
VEGFA-216ENST00000512683 PECRQ9BY49 303 aa9.68□□□□□ -0.86
VEGFA-216ENST00000512683 FBXL15Q9H469 300 aa9.68□□□□□ -0.86
VEGFA-216ENST00000512683 Q9N2K0 584 aa9.68□□□□□ -0.86
VEGFA-216ENST00000512683 OR1A1Q9P1Q5 309 aa9.68□□□□□ -0.86
VEGFA-216ENST00000512683 KCNK7Q9Y2U2 307 aa9.68□□□□□ -0.86
VEGFA-216ENST00000512683 V9GY05 133 aa9.68□□□□□ -0.86
VEGFA-216ENST00000512683 IGKV1-6A0A0C4DH72 117 aa9.67□□□□□ -0.86
VEGFA-216ENST00000512683 TMEM272A0A1B0GTI8 110 aa9.67□□□□□ -0.86
VEGFA-216ENST00000512683 H0Y980 276 aa9.67□□□□□ -0.86
VEGFA-216ENST00000512683 IGLV1-51P01701 117 aa9.67□□□□□ -0.86
VEGFA-216ENST00000512683 SCTP09683 121 aa9.67□□□□□ -0.86
VEGFA-216ENST00000512683 ZBTB25P24278 435 aa9.67□□□□□ -0.86
VEGFA-216ENST00000512683 SLURP1P55000 103 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms