RNA–Protein interactions for RNA: ENST00000512632.5

LIMCH1-215, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-215ENST00000512632 PFN1P07737 140 aaKnown RBP7.8□□□□□ -1.16
LIMCH1-215ENST00000512632 OR10G9Q8NGN4 311 aa7.8□□□□□ -1.16
LIMCH1-215ENST00000512632 OR10G7Q8NGN6 311 aa7.8□□□□□ -1.16
LIMCH1-215ENST00000512632 PARLQ9H300 379 aa7.8□□□□□ -1.16
LIMCH1-215ENST00000512632 A0A087X0M5 115 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 A0A1B0GX30 115 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 ZNF705GA8MUZ8 300 aaPredicted RBP7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 WNT9BO14905 357 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 ZG16O60844 167 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 FGF7P21781 194 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 PSMB3P49720 205 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 LTC4SQ16873 150 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 ZNF497Q6ZNH5 498 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 GPR87Q9BY21 358 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 TMEM242Q9NWH2 141 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 PITPNC1Q9UKF7 332 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 IGHV3-43A0A0B4J1X8 118 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 PAGE4O60829 102 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 IGHV3-43DP0DP04 118 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 TFF3Q07654 80 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 AESQ08117 197 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 PRSS8Q16651 343 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 FFAR4Q5NUL3 377 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 SSX9Q7RTT3 188 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 LINC00596Q86U02 117 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 WFIKKN1Q96NZ8 548 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 OR5B12Q96R08 314 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 RTL8AQ9BWD3 113 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 PKIBQ9C010 78 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 ODAMA1E959 279 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 PPP5D1E7EU14 171 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 S1PR2O95136 353 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 CER1O95813 267 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 GALR1P47211 349 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 TMEM14EPQ6UXP3 125 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 CYP2G1PQ6ZSU1 146 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 RAB24Q969Q5 203 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 LRP5LA4QPB2 252 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 C17orf98A8MV24 154 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 DEFB108AA8MXU0 73 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 B4E171 279 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 DDTP30046 118 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 CHRNA7P36544 502 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 TSPAN7P41732 249 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 SRD5A3Q9H8P0 318 aa7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 RP1L1Q8IWN7 2480 aaPredicted RBP7.79□□□□□ -1.16
LIMCH1-215ENST00000512632 XKRY2A2RUG3 117 aa7.78□□□□□ -1.16
LIMCH1-215ENST00000512632 SH2D1BO14796 132 aa7.78□□□□□ -1.16
LIMCH1-215ENST00000512632 KBTBD11O94819 623 aa7.78□□□□□ -1.16
LIMCH1-215ENST00000512632 AMBPP02760 352 aa7.78□□□□□ -1.16
LIMCH1-215ENST00000512632 P2RY6Q15077 328 aa7.78□□□□□ -1.16
LIMCH1-215ENST00000512632 OR51G1Q8NGK1 321 aa7.78□□□□□ -1.16
LIMCH1-215ENST00000512632 CTDSP1Q9GZU7 261 aa7.78□□□□□ -1.16
LIMCH1-215ENST00000512632 KCNIP1Q9NZI2 227 aa7.78□□□□□ -1.16
LIMCH1-215ENST00000512632 C1QTNF9BB2RNN3 333 aa7.78□□□□□ -1.16
LIMCH1-215ENST00000512632 LAMTOR5O43504 91 aa7.78□□□□□ -1.16
LIMCH1-215ENST00000512632 CRYAAP02489 173 aa7.78□□□□□ -1.16
LIMCH1-215ENST00000512632 FAM3BP58499 235 aaPredicted RBP7.78□□□□□ -1.16
LIMCH1-215ENST00000512632 UBE2G2P60604 165 aa7.78□□□□□ -1.16
LIMCH1-215ENST00000512632 OR10P1Q8NGE3 313 aa7.78□□□□□ -1.16
LIMCH1-215ENST00000512632 MRGPRDQ8TDS7 321 aa7.78□□□□□ -1.16
LIMCH1-215ENST00000512632 CDH20Q9HBT6 801 aa7.78□□□□□ -1.16
LIMCH1-215ENST00000512632 FOXJ2Q9P0K8 574 aa7.78□□□□□ -1.16
LIMCH1-215ENST00000512632 PIGBOS1A0A0B4J2F0 54 aa7.78□□□□□ -1.16
LIMCH1-215ENST00000512632 C12orf77C9JDV5 145 aa7.78□□□□□ -1.16
LIMCH1-215ENST00000512632 TSTD3H0UI37 97 aa7.78□□□□□ -1.16
LIMCH1-215ENST00000512632 GABRA2P47869 451 aa7.78□□□□□ -1.16
LIMCH1-215ENST00000512632 GCSAMLQ5JQS6 135 aa7.78□□□□□ -1.16
LIMCH1-215ENST00000512632 GCNT2Q8N0V5 402 aa7.78□□□□□ -1.16
LIMCH1-215ENST00000512632 FUT9Q9Y231 359 aa7.78□□□□□ -1.16
LIMCH1-215ENST00000512632 C9orf172C9J069 976 aa7.78□□□□□ -1.16
LIMCH1-215ENST00000512632 ZNF709Q8N972 641 aa7.78□□□□□ -1.16
LIMCH1-215ENST00000512632 SLC25A40Q8TBP6 338 aa7.78□□□□□ -1.16
LIMCH1-215ENST00000512632 BCL2L2Q92843 193 aaPredicted RBP7.78□□□□□ -1.16
LIMCH1-215ENST00000512632 GALMQ96C23 342 aa7.78□□□□□ -1.16
LIMCH1-215ENST00000512632 C5orf30Q96GV9 206 aa7.78□□□□□ -1.16
LIMCH1-215ENST00000512632 OBP2BQ9NPH6 170 aa7.78□□□□□ -1.16
LIMCH1-215ENST00000512632 PCSK5Q92824 1860 aa7.77□□□□□ -1.17
LIMCH1-215ENST00000512632 CTXND1A0A1B0GTU2 59 aa7.77□□□□□ -1.17
LIMCH1-215ENST00000512632 IFNL4K9M1U5 179 aa7.77□□□□□ -1.17
LIMCH1-215ENST00000512632 RAC2P15153 192 aa7.77□□□□□ -1.17
LIMCH1-215ENST00000512632 PKIAP61925 76 aa7.77□□□□□ -1.17
LIMCH1-215ENST00000512632 PPP1CBP62140 327 aa7.77□□□□□ -1.17
LIMCH1-215ENST00000512632 MSMO1Q15800 293 aa7.77□□□□□ -1.17
LIMCH1-215ENST00000512632 OR1P1Q8NH06 330 aa7.77□□□□□ -1.17
LIMCH1-215ENST00000512632 DTD1Q8TEA8 209 aa7.77□□□□□ -1.17
LIMCH1-215ENST00000512632 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.77□□□□□ -1.17
LIMCH1-215ENST00000512632 WASF3Q9UPY6 502 aa7.77□□□□□ -1.17
LIMCH1-215ENST00000512632 POLDIP2Q9Y2S7 368 aa7.77□□□□□ -1.17
LIMCH1-215ENST00000512632 CADP27708 2225 aa7.77□□□□□ -1.17
LIMCH1-215ENST00000512632 LRRC30A6NM36 301 aa7.77□□□□□ -1.17
LIMCH1-215ENST00000512632 NPIPB11E5RHQ5 1161 aa7.77□□□□□ -1.17
LIMCH1-215ENST00000512632 SOX15O60248 233 aa7.77□□□□□ -1.17
LIMCH1-215ENST00000512632 LYZL6O75951 148 aa7.77□□□□□ -1.17
LIMCH1-215ENST00000512632 HAND1O96004 215 aa7.77□□□□□ -1.17
LIMCH1-215ENST00000512632 IGHV3-13P01766 116 aa7.77□□□□□ -1.17
LIMCH1-215ENST00000512632 IGHV3-7P01780 117 aa7.77□□□□□ -1.17
LIMCH1-215ENST00000512632 MEOX1P50221 254 aa7.77□□□□□ -1.17
LIMCH1-215ENST00000512632 FBXW9Q5XUX1 488 aa7.77□□□□□ -1.17
LIMCH1-215ENST00000512632 MOB1BQ7L9L4 216 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms