RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 ZNF66Q6ZN08 573 aa6.67□□□□□ -1.34
HTT-209ENST00000512068 LRTM2Q8N967 370 aa6.67□□□□□ -1.34
HTT-209ENST00000512068 INO80EQ8NBZ0 244 aaPredicted RBP6.67□□□□□ -1.34
HTT-209ENST00000512068 GRPEL2Q8TAA5 225 aa6.67□□□□□ -1.34
HTT-209ENST00000512068 PPP1R1CQ8WVI7 109 aa6.67□□□□□ -1.34
HTT-209ENST00000512068 RBPMSQ93062 196 aaKnown RBP6.67□□□□□ -1.34
HTT-209ENST00000512068 RRNAD1Q96FB5 475 aaKnown RBP6.67□□□□□ -1.34
HTT-209ENST00000512068 TP53RKQ96S44 253 aa6.67□□□□□ -1.34
HTT-209ENST00000512068 S1PR3Q99500 378 aa6.67□□□□□ -1.34
HTT-209ENST00000512068 BARX1Q9HBU1 254 aaPredicted RBP6.67□□□□□ -1.34
HTT-209ENST00000512068 ZC4H2Q9NQZ6 224 aa6.67□□□□□ -1.34
HTT-209ENST00000512068 C19orf12Q9NSK7 152 aa6.67□□□□□ -1.34
HTT-209ENST00000512068 PIPOXQ9P0Z9 390 aa6.67□□□□□ -1.34
HTT-209ENST00000512068 CTSZQ9UBR2 303 aa6.67□□□□□ -1.34
HTT-209ENST00000512068 IGSF10Q6WRI0 2623 aa6.67□□□□□ -1.34
HTT-209ENST00000512068 A1L4Q6 167 aa6.66□□□□□ -1.34
HTT-209ENST00000512068 M0R1X1 148 aa6.66□□□□□ -1.34
HTT-209ENST00000512068 WRBO00258 174 aa6.66□□□□□ -1.34
HTT-209ENST00000512068 TOR1AO14656 332 aa6.66□□□□□ -1.34
HTT-209ENST00000512068 RAB29O14966 203 aa6.66□□□□□ -1.34
HTT-209ENST00000512068 ARPC5O15511 151 aa6.66□□□□□ -1.34
HTT-209ENST00000512068 LY6HO94772 140 aa6.66□□□□□ -1.34
HTT-209ENST00000512068 CDS2O95674 445 aa6.66□□□□□ -1.34
HTT-209ENST00000512068 PVALBP20472 110 aaPredicted RBP6.66□□□□□ -1.34
HTT-209ENST00000512068 VDAC1P21796 283 aa6.66□□□□□ -1.34
HTT-209ENST00000512068 PSMB6P28072 239 aa6.66□□□□□ -1.34
HTT-209ENST00000512068 ERVK-16P61578 105 aa6.66□□□□□ -1.34
HTT-209ENST00000512068 SRSF4Q08170 494 aaKnown RBP6.66□□□□□ -1.34
HTT-209ENST00000512068 ZNF273Q14593 569 aa6.66□□□□□ -1.34
HTT-209ENST00000512068 TMEM200BQ69YZ2 307 aa6.66□□□□□ -1.34
HTT-209ENST00000512068 C11orf87Q6NUJ2 197 aa6.66□□□□□ -1.34
HTT-209ENST00000512068 BTNL3Q6UXE8 466 aa6.66□□□□□ -1.34
HTT-209ENST00000512068 HEPN1Q6WQI6 88 aa6.66□□□□□ -1.34
HTT-209ENST00000512068 LYZL2Q7Z4W2 148 aa6.66□□□□□ -1.34
HTT-209ENST00000512068 LDLRAD3Q86YD5 345 aa6.66□□□□□ -1.34
HTT-209ENST00000512068 LYG1Q8N1E2 194 aa6.66□□□□□ -1.34
HTT-209ENST00000512068 SLC35G3Q8N808 338 aa6.66□□□□□ -1.34
HTT-209ENST00000512068 ZBTB8BQ8NAP8 495 aaPredicted RBP6.66□□□□□ -1.34
HTT-209ENST00000512068 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.66□□□□□ -1.34
HTT-209ENST00000512068 OR10X1Q8NGY0 326 aa6.66□□□□□ -1.34
HTT-209ENST00000512068 OR1S1Q8NH92 325 aa6.66□□□□□ -1.34
HTT-209ENST00000512068 CD300LFQ8TDQ1 290 aa6.66□□□□□ -1.34
HTT-209ENST00000512068 GLYATL2Q8WU03 294 aa6.66□□□□□ -1.34
HTT-209ENST00000512068 DCUN1D4Q92564 292 aa6.66□□□□□ -1.34
HTT-209ENST00000512068 MSI2Q96DH6 328 aaKnown RBP6.66□□□□□ -1.34
HTT-209ENST00000512068 ABHD14BQ96IU4 210 aa6.66□□□□□ -1.34
HTT-209ENST00000512068 ADTRPQ96IZ2 230 aa6.66□□□□□ -1.34
HTT-209ENST00000512068 C18orf12Q96KH6 178 aa6.66□□□□□ -1.34
HTT-209ENST00000512068 TMEM56Q96MV1 263 aa6.66□□□□□ -1.34
HTT-209ENST00000512068 PIMREGQ9BSJ6 248 aa6.66□□□□□ -1.34
HTT-209ENST00000512068 SSBP3Q9BWW4 388 aaPredicted RBP6.66□□□□□ -1.34
HTT-209ENST00000512068 PARP12Q9H0J9 701 aaKnown RBP6.66□□□□□ -1.34
HTT-209ENST00000512068 NARFLQ9H6Q4 476 aa6.66□□□□□ -1.34
HTT-209ENST00000512068 RPUSD1Q9UJJ7 312 aaKnown RBP6.66□□□□□ -1.34
HTT-209ENST00000512068 TMEM56-RWDD3S4R434 201 aa6.66□□□□□ -1.34
HTT-209ENST00000512068 PPIAL4CA0A0B4J2A2 164 aa6.65□□□□□ -1.34
HTT-209ENST00000512068 A0A1W2PPR1 153 aa6.65□□□□□ -1.34
HTT-209ENST00000512068 HMSDA8MTL9 139 aa6.65□□□□□ -1.34
HTT-209ENST00000512068 TNFRSF13BO14836 293 aaPredicted RBP6.65□□□□□ -1.34
HTT-209ENST00000512068 MPC2O95563 127 aa6.65□□□□□ -1.34
HTT-209ENST00000512068 IGHV3-7P01780 117 aa6.65□□□□□ -1.34
HTT-209ENST00000512068 LIPFP07098 398 aa6.65□□□□□ -1.34
HTT-209ENST00000512068 WNT2P09544 360 aa6.65□□□□□ -1.34
HTT-209ENST00000512068 PPIAL4GP0DN37 164 aa6.65□□□□□ -1.34
HTT-209ENST00000512068 CGB3P0DN86 165 aa6.65□□□□□ -1.34
HTT-209ENST00000512068 CGB7P0DN87 165 aa6.65□□□□□ -1.34
HTT-209ENST00000512068 SLC25A4P12235 298 aa6.65□□□□□ -1.34
HTT-209ENST00000512068 CCL3L1P16619 93 aa6.65□□□□□ -1.34
HTT-209ENST00000512068 THBS3P49746 956 aa6.65□□□□□ -1.34
HTT-209ENST00000512068 LOXL3P58215 753 aa6.65□□□□□ -1.34
HTT-209ENST00000512068 VAMP2P63027 116 aa6.65□□□□□ -1.34
HTT-209ENST00000512068 WDR25Q64LD2 544 aaPredicted RBP6.65□□□□□ -1.34
HTT-209ENST00000512068 SP5Q6BEB4 398 aaPredicted RBP6.65□□□□□ -1.34
HTT-209ENST00000512068 CLEC2AQ6UVW9 174 aa6.65□□□□□ -1.34
HTT-209ENST00000512068 ZNF546Q86UE3 836 aa6.65□□□□□ -1.34
HTT-209ENST00000512068 FOXRED2Q8IWF2 684 aa6.65□□□□□ -1.34
HTT-209ENST00000512068 SELENOHQ8IZQ5 122 aaKnown RBP6.65□□□□□ -1.34
HTT-209ENST00000512068 SPAG16Q8N0X2 631 aa6.65□□□□□ -1.34
HTT-209ENST00000512068 FGFRL1Q8N441 504 aa6.65□□□□□ -1.34
HTT-209ENST00000512068 GPHA2Q96T91 129 aa6.65□□□□□ -1.34
HTT-209ENST00000512068 MFFQ9GZY8 342 aa6.65□□□□□ -1.34
HTT-209ENST00000512068 SLA2Q9H6Q3 261 aa6.65□□□□□ -1.34
HTT-209ENST00000512068 PATZ1Q9HBE1 687 aaKnown RBP6.65□□□□□ -1.34
HTT-209ENST00000512068 FAM212BQ9NTI7 297 aaPredicted RBP6.65□□□□□ -1.34
HTT-209ENST00000512068 SDHAF2Q9NX18 166 aa6.65□□□□□ -1.34
HTT-209ENST00000512068 ONECUT1Q9UBC0 465 aa6.65□□□□□ -1.34
HTT-209ENST00000512068 LSM5Q9Y4Y9 91 aaKnown RBP6.65□□□□□ -1.34
HTT-209ENST00000512068 SESN1Q9Y6P5 492 aa6.65□□□□□ -1.34
HTT-209ENST00000512068 LOC105371242A0A075B767 164 aa6.64□□□□□ -1.35
HTT-209ENST00000512068 A0A0D9SG52 128 aa6.64□□□□□ -1.35
HTT-209ENST00000512068 A0A1W2PPE3 182 aa6.64□□□□□ -1.35
HTT-209ENST00000512068 KANTRA0A1W2PQU2 76 aa6.64□□□□□ -1.35
HTT-209ENST00000512068 J3QKU1 62 aa6.64□□□□□ -1.35
HTT-209ENST00000512068 RBMXL2O75526 392 aaKnown RBP6.64□□□□□ -1.35
HTT-209ENST00000512068 APOA2P02652 100 aa6.64□□□□□ -1.35
HTT-209ENST00000512068 RNF224P0DH78 156 aa6.64□□□□□ -1.35
HTT-209ENST00000512068 LPAR6P43657 344 aa6.64□□□□□ -1.35
HTT-209ENST00000512068 NKX2-1P43699 371 aaPredicted RBP6.64□□□□□ -1.35
HTT-209ENST00000512068 AP2S1P53680 142 aaPredicted RBP6.64□□□□□ -1.35
HTT-209ENST00000512068 PRRX1P54821 245 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms