RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 CRIP2P52943 208 aaPredicted RBP11.88□□□□□ -0.51
COL1A1-213ENST00000511732 CX3CL1P78423 397 aa11.88□□□□□ -0.51
COL1A1-213ENST00000511732 RUNX1Q01196 453 aa11.88□□□□□ -0.51
COL1A1-213ENST00000511732 SSX1Q16384 188 aa11.88□□□□□ -0.51
COL1A1-213ENST00000511732 ECSCRQ19T08 205 aa11.88□□□□□ -0.51
COL1A1-213ENST00000511732 HES5Q5TA89 166 aa11.88□□□□□ -0.51
COL1A1-213ENST00000511732 TMEM65Q6PI78 240 aa11.88□□□□□ -0.51
COL1A1-213ENST00000511732 DRAXINQ8NBI3 349 aaPredicted RBP11.88□□□□□ -0.51
COL1A1-213ENST00000511732 OR1N2Q8NGR9 330 aa11.88□□□□□ -0.51
COL1A1-213ENST00000511732 PTX4Q96A99 478 aa11.88□□□□□ -0.51
COL1A1-213ENST00000511732 CMSS1Q9BQ75 279 aaKnown RBP11.88□□□□□ -0.51
COL1A1-213ENST00000511732 ALX4Q9H161 411 aaPredicted RBP11.88□□□□□ -0.51
COL1A1-213ENST00000511732 C12orf4Q9NQ89 552 aa11.88□□□□□ -0.51
COL1A1-213ENST00000511732 VSIG4Q9Y279 399 aa11.88□□□□□ -0.51
COL1A1-213ENST00000511732 KCNK7Q9Y2U2 307 aa11.88□□□□□ -0.51
COL1A1-213ENST00000511732 LSM4Q9Y4Z0 139 aaKnown RBP11.88□□□□□ -0.51
COL1A1-213ENST00000511732 V9GY05 133 aa11.88□□□□□ -0.51
COL1A1-213ENST00000511732 A0A1W2PN81 502 aa11.87□□□□□ -0.51
COL1A1-213ENST00000511732 H7C2Y5 167 aa11.87□□□□□ -0.51
COL1A1-213ENST00000511732 HSPA12AO43301 675 aa11.87□□□□□ -0.51
COL1A1-213ENST00000511732 DENRO43583 198 aaKnown RBP11.87□□□□□ -0.51
COL1A1-213ENST00000511732 GSTP1P09211 210 aaKnown RBP11.87□□□□□ -0.51
COL1A1-213ENST00000511732 MC5RP33032 325 aa11.87□□□□□ -0.51
COL1A1-213ENST00000511732 CHRNA7P36544 502 aa11.87□□□□□ -0.51
COL1A1-213ENST00000511732 ECI1P42126 302 aa11.87□□□□□ -0.51
COL1A1-213ENST00000511732 OR10A3P58181 314 aa11.87□□□□□ -0.51
COL1A1-213ENST00000511732 MOGAT2Q3SYC2 334 aa11.87□□□□□ -0.51
COL1A1-213ENST00000511732 ZNF260Q3ZCT1 412 aa11.87□□□□□ -0.51
COL1A1-213ENST00000511732 ZNF660Q6AZW8 331 aaPredicted RBP11.87□□□□□ -0.51
COL1A1-213ENST00000511732 ZNF383Q8NA42 475 aa11.87□□□□□ -0.51
COL1A1-213ENST00000511732 EDARADDQ8WWZ3 215 aa11.87□□□□□ -0.51
COL1A1-213ENST00000511732 FAM103A1Q9BTL3 118 aaKnown RBP11.87□□□□□ -0.51
COL1A1-213ENST00000511732 MGAT4AQ9UM21 535 aa11.87□□□□□ -0.51
COL1A1-213ENST00000511732 GAB2Q9UQC2 676 aa11.87□□□□□ -0.51
COL1A1-213ENST00000511732 WASHC3Q9Y3C0 194 aa11.87□□□□□ -0.51
COL1A1-213ENST00000511732 NUBP2Q9Y5Y2 271 aa11.87□□□□□ -0.51
COL1A1-213ENST00000511732 IGKV1-16P04430 117 aa11.86□□□□□ -0.51
COL1A1-213ENST00000511732 CD3GP09693 182 aa11.86□□□□□ -0.51
COL1A1-213ENST00000511732 ZNF616Q08AN1 781 aa11.86□□□□□ -0.51
COL1A1-213ENST00000511732 PSG5Q15238 335 aa11.86□□□□□ -0.51
COL1A1-213ENST00000511732 IZUMO2Q6UXV1 221 aa11.86□□□□□ -0.51
COL1A1-213ENST00000511732 OR56B1Q8NGI3 324 aa11.86□□□□□ -0.51
COL1A1-213ENST00000511732 CNBD2Q96M20 576 aa11.86□□□□□ -0.51
COL1A1-213ENST00000511732 CLCC1Q96S66 551 aa11.86□□□□□ -0.51
COL1A1-213ENST00000511732 GHITMQ9H3K2 345 aa11.86□□□□□ -0.51
COL1A1-213ENST00000511732 TPSG1Q9NRR2 321 aa11.86□□□□□ -0.51
COL1A1-213ENST00000511732 RDH8Q9NYR8 311 aa11.86□□□□□ -0.51
COL1A1-213ENST00000511732 ZMAT5Q9UDW3 170 aaKnown RBP11.86□□□□□ -0.51
COL1A1-213ENST00000511732 A3GALT2U3KPV4 340 aa11.86□□□□□ -0.51
COL1A1-213ENST00000511732 TRDCB7Z8K6 153 aa11.85□□□□□ -0.51
COL1A1-213ENST00000511732 RBBP9O75884 186 aa11.85□□□□□ -0.51
COL1A1-213ENST00000511732 OR8U8P0C7N1 319 aa11.85□□□□□ -0.51
COL1A1-213ENST00000511732 PLGLAQ15195 96 aa11.85□□□□□ -0.51
COL1A1-213ENST00000511732 TBCEQ15813 527 aaPredicted RBP11.85□□□□□ -0.51
COL1A1-213ENST00000511732 DCUN1D4Q92564 292 aa11.85□□□□□ -0.51
COL1A1-213ENST00000511732 RNF5Q99942 180 aa11.85□□□□□ -0.51
COL1A1-213ENST00000511732 ACOT13Q9NPJ3 140 aa11.85□□□□□ -0.51
COL1A1-213ENST00000511732 METTL1Q9UBP6 276 aaKnown RBP11.85□□□□□ -0.51
COL1A1-213ENST00000511732 CA2P00918 260 aa11.84□□□□□ -0.51
COL1A1-213ENST00000511732 IGSF11Q5DX21 431 aa11.84□□□□□ -0.51
COL1A1-213ENST00000511732 CD200R1LQ6Q8B3 271 aa11.84□□□□□ -0.51
COL1A1-213ENST00000511732 ZNF367Q7RTV3 350 aa11.84□□□□□ -0.51
COL1A1-213ENST00000511732 TOLLIPQ9H0E2 274 aa11.84□□□□□ -0.51
COL1A1-213ENST00000511732 ZNF221Q9UK13 617 aa11.84□□□□□ -0.51
COL1A1-213ENST00000511732 RAB22AQ9UL26 194 aa11.84□□□□□ -0.51
COL1A1-213ENST00000511732 FOXA2Q9Y261 457 aaPredicted RBP11.84□□□□□ -0.51
COL1A1-213ENST00000511732 IGHV4OR15-8A0A075B7B6 117 aa11.83□□□□□ -0.52
COL1A1-213ENST00000511732 A0A087WW49 117 aa11.83□□□□□ -0.52
COL1A1-213ENST00000511732 A0A0B4J203 849 aa11.83□□□□□ -0.52
COL1A1-213ENST00000511732 RAB27BO00194 218 aa11.83□□□□□ -0.52
COL1A1-213ENST00000511732 ARPC1BO15143 372 aaKnown RBP11.83□□□□□ -0.52
COL1A1-213ENST00000511732 FABP7O15540 132 aa11.83□□□□□ -0.52
COL1A1-213ENST00000511732 TFAP2AP05549 437 aa11.83□□□□□ -0.52
COL1A1-213ENST00000511732 FCGR3AP08637 254 aa11.83□□□□□ -0.52
COL1A1-213ENST00000511732 GSTT2P0CG29 244 aa11.83□□□□□ -0.52
COL1A1-213ENST00000511732 GSTT2BP0CG30 244 aa11.83□□□□□ -0.52
COL1A1-213ENST00000511732 GNB3P16520 340 aa11.83□□□□□ -0.52
COL1A1-213ENST00000511732 PSMD7P51665 324 aa11.83□□□□□ -0.52
COL1A1-213ENST00000511732 SLURP1P55000 103 aa11.83□□□□□ -0.52
COL1A1-213ENST00000511732 RPS16P62249 146 aaKnown RBP11.83□□□□□ -0.52
COL1A1-213ENST00000511732 SSBP2P81877 361 aaPredicted RBP11.83□□□□□ -0.52
COL1A1-213ENST00000511732 DCTN2Q13561 401 aaKnown RBP11.83□□□□□ -0.52
COL1A1-213ENST00000511732 AKIRIN2Q53H80 203 aa11.83□□□□□ -0.52
COL1A1-213ENST00000511732 ZNF562Q6V9R5 426 aa11.83□□□□□ -0.52
COL1A1-213ENST00000511732 PPP1R27Q86WC6 154 aa11.83□□□□□ -0.52
COL1A1-213ENST00000511732 TCTEX1D1Q8N7M0 179 aa11.83□□□□□ -0.52
COL1A1-213ENST00000511732 LFNGQ8NES3 379 aa11.83□□□□□ -0.52
COL1A1-213ENST00000511732 OR4A4PQ8NGN8 299 aa11.83□□□□□ -0.52
COL1A1-213ENST00000511732 ABHD5Q8WTS1 349 aa11.83□□□□□ -0.52
COL1A1-213ENST00000511732 DLX4Q92988 240 aaPredicted RBP11.83□□□□□ -0.52
COL1A1-213ENST00000511732 RAB3CQ96E17 227 aa11.83□□□□□ -0.52
COL1A1-213ENST00000511732 C5orf30Q96GV9 206 aa11.83□□□□□ -0.52
COL1A1-213ENST00000511732 ZNF230Q9UIE0 474 aaPredicted RBP11.83□□□□□ -0.52
COL1A1-213ENST00000511732 ZNF256Q9Y2P7 627 aaPredicted RBP11.83□□□□□ -0.52
COL1A1-213ENST00000511732 HUWE1Q7Z6Z7 4374 aaKnown RBP11.83□□□□□ -0.52
COL1A1-213ENST00000511732 KMT2CQ8NEZ4 4911 aaKnown RBP11.82□□□□□ -0.52
COL1A1-213ENST00000511732 TRAV1-2A0A0B4J238 106 aa11.82□□□□□ -0.52
COL1A1-213ENST00000511732 IFITM5A6NNB3 132 aa11.82□□□□□ -0.52
COL1A1-213ENST00000511732 MFNGO00587 321 aa11.82□□□□□ -0.52
COL1A1-213ENST00000511732 OVOL1O14753 267 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms