RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 RAP2BP61225 183 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 AESQ08117 197 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 TMEM187Q14656 261 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 CNPY1Q3B7I2 92 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 NHLRC3Q5JS37 347 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 AADACL3Q5VUY0 350 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 ASCL4Q6XD76 172 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 H2BFWTQ7Z2G1 175 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 OR2C3Q8N628 320 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 HSD17B11Q8NBQ5 300 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 OR5H2Q8NGV7 314 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 RFESDQ8TAC1 157 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 CCDC107Q8WV48 283 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 ZBTB9Q96C00 473 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 ABHD14BQ96IU4 210 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 ST6GALNAC5Q9BVH7 336 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 YTHDF1Q9BYJ9 559 aaKnown RBP2.28□□□□□ -2.04
CLOCK-209ENST00000511124 DPH3P1Q9H4G8 78 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 TNFRSF12AQ9NP84 129 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 AURKAIP1Q9NWT8 199 aaPredicted RBP2.28□□□□□ -2.04
CLOCK-209ENST00000511124 COMMD9Q9P000 198 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 RCC2Q9P258 522 aaKnown RBP2.28□□□□□ -2.04
CLOCK-209ENST00000511124 COPZ2Q9P299 210 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 HEATR5AQ86XA9 2040 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 IGSF10Q6WRI0 2623 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 C17orf51A8MQB3 221 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 DISC1C4P0D8 188 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 RAB27BO00194 218 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 TSPAN15O95858 294 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 MT-CO2P00403 227 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 GASTP01350 101 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 IFNA5P01569 189 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 IGHG4P01861 327 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 TRAPPC2P0DI81 140 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 TRAPPC2BP0DI82 140 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 NQO2P16083 231 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 BCL3P20749 454 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 GDNFP39905 211 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 SCAND1P57086 179 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 CD81P60033 236 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 SNRPNP63162 240 aaKnown RBP2.28□□□□□ -2.04
CLOCK-209ENST00000511124 HLA-DRB3P79483 266 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 MRPS10P82664 201 aaKnown RBP2.28□□□□□ -2.04
CLOCK-209ENST00000511124 EXOSC2Q13868 293 aaKnown RBP2.28□□□□□ -2.04
CLOCK-209ENST00000511124 PRSS53Q2L4Q9 553 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 BEAN1Q3B7T3 259 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 FAM76BQ5HYJ3 339 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 CD200R1LQ6Q8B3 271 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 Q6ZR03 302 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 SUMF2Q8NBJ7 301 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 C4orf36Q96KX1 117 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 CIB3Q96Q77 187 aaPredicted RBP2.28□□□□□ -2.04
CLOCK-209ENST00000511124 TXN2Q99757 166 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 MAGT1Q9H0U3 335 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 IKZF5Q9H5V7 419 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 PLEKHA3Q9HB20 300 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 TAS2R8Q9NYW2 309 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 TP53TG1Q9Y2A0 90 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 CEPT1Q9Y6K0 416 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 ACANP16112 2415 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 MED12Q93074 2177 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 LINC01548A6NM66 108 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 TRDCB7Z8K6 153 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 FABP7O15540 132 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 HBZP02008 142 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 RPA2P15927 270 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 NPPCP23582 126 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 FGF9P31371 208 aaPredicted RBP2.28□□□□□ -2.04
CLOCK-209ENST00000511124 GALR1P47211 349 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 FAM3BP58499 235 aaPredicted RBP2.28□□□□□ -2.04
CLOCK-209ENST00000511124 SLAQ13239 276 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 SMCO1Q147U7 214 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 SNAI3Q3KNW1 292 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 SYT6Q5T7P8 510 aaPredicted RBP2.28□□□□□ -2.04
CLOCK-209ENST00000511124 GGNBP1Q5YKI7 109 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 CNIH2Q6PI25 160 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 SLC25A48Q6ZT89 311 aaKnown RBP2.28□□□□□ -2.04
CLOCK-209ENST00000511124 KCTD9Q7L273 389 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 C15orf53Q8NAA6 179 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 C19orf18Q8NEA5 215 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 OR52N4Q8NGI2 321 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 RBPMSQ93062 196 aaKnown RBP2.28□□□□□ -2.04
CLOCK-209ENST00000511124 RMI2Q96E14 147 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 ETV7Q9Y603 341 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 V9GY05 133 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 TLN2Q9Y4G6 2542 aa2.28□□□□□ -2.05
CLOCK-209ENST00000511124 TET2Q6N021 2002 aaPredicted RBP2.27□□□□□ -2.05
CLOCK-209ENST00000511124 TEX13DA0A0J9YY54 714 aaPredicted RBP2.27□□□□□ -2.05
CLOCK-209ENST00000511124 FAM25AB3EWG3 89 aa2.27□□□□□ -2.05
CLOCK-209ENST00000511124 FAM25CB3EWG5 89 aa2.27□□□□□ -2.05
CLOCK-209ENST00000511124 FAM25GB3EWG6 89 aa2.27□□□□□ -2.05
CLOCK-209ENST00000511124 J3KTA2 159 aa2.27□□□□□ -2.05
CLOCK-209ENST00000511124 HSPB6O14558 160 aa2.27□□□□□ -2.05
CLOCK-209ENST00000511124 S1PR2O95136 353 aa2.27□□□□□ -2.05
CLOCK-209ENST00000511124 HBE1P02100 147 aa2.27□□□□□ -2.05
CLOCK-209ENST00000511124 TTRP02766 147 aa2.27□□□□□ -2.05
CLOCK-209ENST00000511124 CD1AP06126 327 aa2.27□□□□□ -2.05
CLOCK-209ENST00000511124 SLC25A4P12235 298 aa2.27□□□□□ -2.05
CLOCK-209ENST00000511124 SRMP19623 302 aa2.27□□□□□ -2.05
CLOCK-209ENST00000511124 CCL1P22362 96 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms