RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 CD37P11049 281 aa3.96□□□□□ -1.78
NEK1-204ENST00000509912 IL2RGP31785 369 aa3.96□□□□□ -1.78
NEK1-204ENST00000509912 CEBPDP49716 269 aaPredicted RBP3.96□□□□□ -1.78
NEK1-204ENST00000509912 EWSR1Q01844 656 aaKnown RBP eCLIP3.96□□□□□ -1.78
NEK1-204ENST00000509912 OR8B8Q15620 311 aa3.96□□□□□ -1.78
NEK1-204ENST00000509912 RBM48Q5RL73 367 aaKnown RBP3.96□□□□□ -1.78
NEK1-204ENST00000509912 TMEM236Q5W0B7 351 aa3.96□□□□□ -1.78
NEK1-204ENST00000509912 TMEM42Q69YG0 159 aa3.96□□□□□ -1.78
NEK1-204ENST00000509912 FAHD2BQ6P2I3 314 aaPredicted RBP3.96□□□□□ -1.78
NEK1-204ENST00000509912 ZNF773Q6PK81 442 aa3.96□□□□□ -1.78
NEK1-204ENST00000509912 ZNF562Q6V9R5 426 aa3.96□□□□□ -1.78
NEK1-204ENST00000509912 SPAG16Q8N0X2 631 aa3.96□□□□□ -1.78
NEK1-204ENST00000509912 FAM71E2Q8N5Q1 922 aa3.96□□□□□ -1.78
NEK1-204ENST00000509912 C3orf56Q8N813 242 aa3.96□□□□□ -1.78
NEK1-204ENST00000509912 OR4K5Q8NGD3 323 aa3.96□□□□□ -1.78
NEK1-204ENST00000509912 AP3S1Q92572 193 aa3.96□□□□□ -1.78
NEK1-204ENST00000509912 FAHD2AQ96GK7 314 aa3.96□□□□□ -1.78
NEK1-204ENST00000509912 FAM210BQ96KR6 192 aa3.96□□□□□ -1.78
NEK1-204ENST00000509912 RNF2Q99496 336 aa3.96□□□□□ -1.78
NEK1-204ENST00000509912 FNDC4Q9H6D8 234 aaPredicted RBP3.96□□□□□ -1.78
NEK1-204ENST00000509912 METTL8Q9H825 291 aaKnown RBP3.96□□□□□ -1.78
NEK1-204ENST00000509912 MMP26Q9NRE1 261 aa3.96□□□□□ -1.78
NEK1-204ENST00000509912 ABCB10Q9NRK6 738 aa3.96□□□□□ -1.78
NEK1-204ENST00000509912 NAGKQ9UJ70 344 aa3.96□□□□□ -1.78
NEK1-204ENST00000509912 ENSAO43768 121 aaKnown RBP3.95□□□□□ -1.78
NEK1-204ENST00000509912 IGHV1-46P01743 117 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 STOMP27105 288 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 DDTP30046 118 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 CEACAM3P40198 252 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 NAA10P41227 235 aaPredicted RBP3.95□□□□□ -1.78
NEK1-204ENST00000509912 ALDH3B1P43353 468 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 FHITP49789 147 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 AP3S2P59780 193 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 UBA52P62987 128 aaKnown RBP3.95□□□□□ -1.78
NEK1-204ENST00000509912 CLINT1Q14677 625 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 MAD2L1BPQ15013 274 aaPredicted RBP3.95□□□□□ -1.78
NEK1-204ENST00000509912 XAF1Q6GPH4 301 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 Q6ZRP5 223 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 STPG2Q8N412 459 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 AQP11Q8NBQ7 271 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 OR1F12Q8NHA8 337 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 APOL4Q9BPW4 351 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 TCEAL7Q9BRU2 100 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 PKIBQ9C010 78 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 HES4Q9HCC6 221 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 AMBNQ9NP70 447 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 GSKIPQ9P0R6 139 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 FBXO7Q9Y3I1 522 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 PYGO1Q9Y3Y4 419 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 LRRN3E7EW58 273 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 RNASEK-C17orf49H0YIS7 233 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 RNF13O43567 381 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 BUB3O43684 328 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 CD1BP29016 333 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 HOXC5Q00444 222 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 MEF2CQ06413 473 aaPredicted RBP3.95□□□□□ -1.78
NEK1-204ENST00000509912 RPL18Q07020 188 aaKnown RBP3.95□□□□□ -1.78
NEK1-204ENST00000509912 KLK9Q2XQG4 91 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 FAM74A1Q5RGS3 127 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 HACD4Q5VWC8 232 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 OR6T1Q8NGN1 323 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 OR11L1Q8NGX0 322 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 MRGPRDQ8TDS7 321 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 APH1BQ8WW43 257 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 S100ZQ8WXG8 99 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 DYRK2Q92630 601 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 HIPK2Q9H2X6 1198 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 KLK9Q9UKQ9 250 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 RHBDD3Q9Y3P4 386 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 HSPB11Q9Y547 144 aa3.95□□□□□ -1.78
NEK1-204ENST00000509912 CA11O75493 328 aa3.94□□□□□ -1.78
NEK1-204ENST00000509912 WBP4O75554 376 aaKnown RBP3.94□□□□□ -1.78
NEK1-204ENST00000509912 SOX14O95416 240 aa3.94□□□□□ -1.78
NEK1-204ENST00000509912 ADRA2AP08913 450 aa3.94□□□□□ -1.78
NEK1-204ENST00000509912 C4BPBP20851 252 aa3.94□□□□□ -1.78
NEK1-204ENST00000509912 PPP1CBP62140 327 aa3.94□□□□□ -1.78
NEK1-204ENST00000509912 PSG4Q00888 419 aa3.94□□□□□ -1.78
NEK1-204ENST00000509912 ZNF154Q13106 437 aa3.94□□□□□ -1.78
NEK1-204ENST00000509912 DMKNQ6E0U4 476 aaPredicted RBP3.94□□□□□ -1.78
NEK1-204ENST00000509912 LAMTOR1Q6IAA8 161 aa3.94□□□□□ -1.78
NEK1-204ENST00000509912 SMARCD3Q6STE5 483 aa3.94□□□□□ -1.78
NEK1-204ENST00000509912 IQCF1Q8N6M8 205 aa3.94□□□□□ -1.78
NEK1-204ENST00000509912 OR13F1Q8NGS4 319 aa3.94□□□□□ -1.78
NEK1-204ENST00000509912 GLYATL2Q8WU03 294 aa3.94□□□□□ -1.78
NEK1-204ENST00000509912 MRGPRFQ96AM1 343 aa3.94□□□□□ -1.78
NEK1-204ENST00000509912 SDSLQ96GA7 329 aa3.94□□□□□ -1.78
NEK1-204ENST00000509912 KRTAP4-12Q9BQ66 201 aa3.94□□□□□ -1.78
NEK1-204ENST00000509912 ZNF2Q9BSG1 426 aaPredicted RBP3.94□□□□□ -1.78
NEK1-204ENST00000509912 GGACTQ9BVM4 153 aa3.94□□□□□ -1.78
NEK1-204ENST00000509912 GABARAPL3Q9BY60 117 aa3.94□□□□□ -1.78
NEK1-204ENST00000509912 OR2J1Q9GZK6 312 aa3.94□□□□□ -1.78
NEK1-204ENST00000509912 KCNIP3Q9Y2W7 256 aa3.94□□□□□ -1.78
NEK1-204ENST00000509912 EFCAB9A8MZ26 197 aa3.94□□□□□ -1.78
NEK1-204ENST00000509912 M0QZK8 103 aa3.94□□□□□ -1.78
NEK1-204ENST00000509912 PRKYO43930 277 aa3.94□□□□□ -1.78
NEK1-204ENST00000509912 PTTG1O95997 202 aa3.94□□□□□ -1.78
NEK1-204ENST00000509912 AADACP22760 399 aa3.94□□□□□ -1.78
NEK1-204ENST00000509912 GGT2P36268 569 aa3.94□□□□□ -1.78
NEK1-204ENST00000509912 EMX1Q04741 257 aaPredicted RBP3.94□□□□□ -1.78
NEK1-204ENST00000509912 TMEM187Q14656 261 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms