RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 LINC00574Q9H8X3 128 aa11.76□□□□□ -0.53
HMGCL-208ENST00000509389 C17orf98A8MV24 154 aa11.75□□□□□ -0.53
HMGCL-208ENST00000509389 C15orf65H3BRN8 121 aa11.75□□□□□ -0.53
HMGCL-208ENST00000509389 SDCBPO00560 298 aaPredicted RBP11.75□□□□□ -0.53
HMGCL-208ENST00000509389 ARPC1BO15143 372 aaKnown RBP11.75□□□□□ -0.53
HMGCL-208ENST00000509389 PRAF2O60831 178 aa11.75□□□□□ -0.53
HMGCL-208ENST00000509389 OPN1MWP04001 364 aa11.75□□□□□ -0.53
HMGCL-208ENST00000509389 IFNA6P05013 189 aa11.75□□□□□ -0.53
HMGCL-208ENST00000509389 IL5P05113 134 aa11.75□□□□□ -0.53
HMGCL-208ENST00000509389 SCTP09683 121 aa11.75□□□□□ -0.53
HMGCL-208ENST00000509389 OPN1MW2P0DN77 364 aa11.75□□□□□ -0.53
HMGCL-208ENST00000509389 OPN1MW3P0DN78 364 aa11.75□□□□□ -0.53
HMGCL-208ENST00000509389 VSIG10L2P0DP72 767 aa11.75□□□□□ -0.53
HMGCL-208ENST00000509389 GLIPR1P48060 266 aa11.75□□□□□ -0.53
HMGCL-208ENST00000509389 BEAN1Q3B7T3 259 aa11.75□□□□□ -0.53
HMGCL-208ENST00000509389 IGSF11Q5DX21 431 aa11.75□□□□□ -0.53
HMGCL-208ENST00000509389 C6orf183Q5T699 404 aa11.75□□□□□ -0.53
HMGCL-208ENST00000509389 MOB3AQ96BX8 217 aa11.75□□□□□ -0.53
HMGCL-208ENST00000509389 FXYD6Q9H0Q3 95 aa11.75□□□□□ -0.53
HMGCL-208ENST00000509389 FLVCR2Q9UPI3 526 aa11.75□□□□□ -0.53
HMGCL-208ENST00000509389 VSIG4Q9Y279 399 aa11.75□□□□□ -0.53
HMGCL-208ENST00000509389 NOTCH3Q9UM47 2321 aa11.75□□□□□ -0.53
HMGCL-208ENST00000509389 TRAV6A0A075B6T7 132 aa11.74□□□□□ -0.53
HMGCL-208ENST00000509389 OR5H14A6NHG9 310 aa11.74□□□□□ -0.53
HMGCL-208ENST00000509389 C12orf77C9JDV5 145 aa11.74□□□□□ -0.53
HMGCL-208ENST00000509389 RAB13P51153 203 aa11.74□□□□□ -0.53
HMGCL-208ENST00000509389 UCP3P55916 312 aa11.74□□□□□ -0.53
HMGCL-208ENST00000509389 H1FOOQ8IZA3 346 aaPredicted RBP11.74□□□□□ -0.53
HMGCL-208ENST00000509389 OR13A1Q8NGR1 328 aa11.74□□□□□ -0.53
HMGCL-208ENST00000509389 CORO2AQ92828 525 aa11.74□□□□□ -0.53
HMGCL-208ENST00000509389 ZNF702PQ9H963 129 aa11.74□□□□□ -0.53
HMGCL-208ENST00000509389 TAF9BQ9HBM6 251 aa11.74□□□□□ -0.53
HMGCL-208ENST00000509389 TRAPPC2LQ9UL33 140 aa11.74□□□□□ -0.53
HMGCL-208ENST00000509389 GPR132Q9UNW8 380 aa11.74□□□□□ -0.53
HMGCL-208ENST00000509389 ALG5Q9Y673 324 aa11.74□□□□□ -0.53
HMGCL-208ENST00000509389 MEIKINA0A087WXM9 373 aa11.73□□□□□ -0.53
HMGCL-208ENST00000509389 MEX3AA1L020 520 aaKnown RBP11.73□□□□□ -0.53
HMGCL-208ENST00000509389 ODF3BA8MYP8 253 aa11.73□□□□□ -0.53
HMGCL-208ENST00000509389 DHFRP00374 187 aa11.73□□□□□ -0.53
HMGCL-208ENST00000509389 ARG1P05089 322 aa11.73□□□□□ -0.53
HMGCL-208ENST00000509389 TRAPPC2P0DI81 140 aa11.73□□□□□ -0.53
HMGCL-208ENST00000509389 TRAPPC2BP0DI82 140 aa11.73□□□□□ -0.53
HMGCL-208ENST00000509389 GLP1RP43220 463 aa11.73□□□□□ -0.53
HMGCL-208ENST00000509389 UBE2MP61081 183 aaKnown RBP11.73□□□□□ -0.53
HMGCL-208ENST00000509389 HABP2Q14520 560 aaPredicted RBP11.73□□□□□ -0.53
HMGCL-208ENST00000509389 SCGB2B2Q4G0G5 96 aa11.73□□□□□ -0.53
HMGCL-208ENST00000509389 LDLRAD2Q5SZI1 272 aa11.73□□□□□ -0.53
HMGCL-208ENST00000509389 KPRPQ5T749 579 aaPredicted RBP11.73□□□□□ -0.53
HMGCL-208ENST00000509389 SAMD5Q5TGI4 173 aa11.73□□□□□ -0.53
HMGCL-208ENST00000509389 GLDNQ6ZMI3 551 aaPredicted RBP11.73□□□□□ -0.53
HMGCL-208ENST00000509389 LYG1Q8N1E2 194 aa11.73□□□□□ -0.53
HMGCL-208ENST00000509389 OR6F1Q8NGZ6 308 aa11.73□□□□□ -0.53
HMGCL-208ENST00000509389 SERTAD4Q9NUC0 356 aa11.73□□□□□ -0.53
HMGCL-208ENST00000509389 OR6C3Q9NZP0 311 aa11.73□□□□□ -0.53
HMGCL-208ENST00000509389 TCF19Q9Y242 345 aa11.73□□□□□ -0.53
HMGCL-208ENST00000509389 TBL2Q9Y4P3 447 aaKnown RBP11.73□□□□□ -0.53
HMGCL-208ENST00000509389 A6NDX4 124 aa11.72□□□□□ -0.53
HMGCL-208ENST00000509389 F2RL2O00254 374 aa11.72□□□□□ -0.53
HMGCL-208ENST00000509389 ZNF728P0DKX0 622 aa11.72□□□□□ -0.53
HMGCL-208ENST00000509389 EDDM3BP56851 147 aa11.72□□□□□ -0.53
HMGCL-208ENST00000509389 TSPAN5P62079 268 aa11.72□□□□□ -0.53
HMGCL-208ENST00000509389 HTD2P86397 168 aa11.72□□□□□ -0.53
HMGCL-208ENST00000509389 DHODHQ02127 395 aa11.72□□□□□ -0.53
HMGCL-208ENST00000509389 MEF2CQ06413 473 aaPredicted RBP11.72□□□□□ -0.53
HMGCL-208ENST00000509389 ZNF626Q68DY1 528 aa11.72□□□□□ -0.53
HMGCL-208ENST00000509389 C5orf24Q7Z6I8 188 aa11.72□□□□□ -0.53
HMGCL-208ENST00000509389 Q8N2B8 174 aa11.72□□□□□ -0.53
HMGCL-208ENST00000509389 TPRX1Q8N7U7 411 aa11.72□□□□□ -0.53
HMGCL-208ENST00000509389 OR11H6Q8NGC7 330 aa11.72□□□□□ -0.53
HMGCL-208ENST00000509389 OR13D1Q8NGV5 346 aa11.72□□□□□ -0.53
HMGCL-208ENST00000509389 MARCH1Q8TCQ1 289 aa11.72□□□□□ -0.53
HMGCL-208ENST00000509389 MALSU1Q96EH3 234 aa11.72□□□□□ -0.53
HMGCL-208ENST00000509389 ZNF2Q9BSG1 426 aaPredicted RBP11.72□□□□□ -0.53
HMGCL-208ENST00000509389 C5orf66Q9H5L9 145 aa11.72□□□□□ -0.53
HMGCL-208ENST00000509389 hCG_2014768A0A024R1R8 64 aa11.71□□□□□ -0.53
HMGCL-208ENST00000509389 TRAV39A0A0B4J263 110 aa11.71□□□□□ -0.53
HMGCL-208ENST00000509389 SNRPGP15A8MWD9 76 aa11.71□□□□□ -0.53
HMGCL-208ENST00000509389 PPYP01298 95 aa11.71□□□□□ -0.53
HMGCL-208ENST00000509389 HBZP02008 142 aa11.71□□□□□ -0.53
HMGCL-208ENST00000509389 RBP4P02753 201 aa11.71□□□□□ -0.53
HMGCL-208ENST00000509389 IGHV1-8P0DP01 117 aa11.71□□□□□ -0.53
HMGCL-208ENST00000509389 CD28P10747 220 aa11.71□□□□□ -0.53
HMGCL-208ENST00000509389 ANXA7P20073 488 aaKnown RBP11.71□□□□□ -0.53
HMGCL-208ENST00000509389 GZMHP20718 246 aa11.71□□□□□ -0.53
HMGCL-208ENST00000509389 FCGR2CP31995 323 aa11.71□□□□□ -0.53
HMGCL-208ENST00000509389 EDDM3AQ14507 147 aa11.71□□□□□ -0.53
HMGCL-208ENST00000509389 SSX2Q16385 188 aa11.71□□□□□ -0.53
HMGCL-208ENST00000509389 NSUN5P1Q3KNT7 163 aa11.71□□□□□ -0.53
HMGCL-208ENST00000509389 TMEM30BQ3MIR4 351 aa11.71□□□□□ -0.53
HMGCL-208ENST00000509389 LY6G6FQ5SQ64 297 aa11.71□□□□□ -0.53
HMGCL-208ENST00000509389 SLC25A42Q86VD7 318 aa11.71□□□□□ -0.53
HMGCL-208ENST00000509389 TMEM219Q86XT9 240 aa11.71□□□□□ -0.53
HMGCL-208ENST00000509389 CCDC107Q8WV48 283 aa11.71□□□□□ -0.53
HMGCL-208ENST00000509389 TMEM230Q96A57 120 aa11.71□□□□□ -0.53
HMGCL-208ENST00000509389 KIRREL1Q96J84 757 aa11.71□□□□□ -0.53
HMGCL-208ENST00000509389 SCGB3A2Q96PL1 93 aa11.71□□□□□ -0.53
HMGCL-208ENST00000509389 RTBDNQ9BSG5 229 aaPredicted RBP11.71□□□□□ -0.53
HMGCL-208ENST00000509389 LINC00312Q9Y6C7 94 aa11.71□□□□□ -0.53
HMGCL-208ENST00000509389 FBXO24O75426 580 aa11.7□□□□□ -0.54
HMGCL-208ENST00000509389 PRB2P02812 416 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms