RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 Q8N402 240 aa12.16□□□□□ -0.46
CXCL1-202ENST00000509101 DHRSXQ8N5I4 330 aa12.16□□□□□ -0.46
CXCL1-202ENST00000509101 NRG4Q8WWG1 115 aa12.16□□□□□ -0.46
CXCL1-202ENST00000509101 ABHD14BQ96IU4 210 aa12.16□□□□□ -0.46
CXCL1-202ENST00000509101 OR14A2Q96R54 314 aa12.16□□□□□ -0.46
CXCL1-202ENST00000509101 PARP12Q9H0J9 701 aaKnown RBP12.16□□□□□ -0.46
CXCL1-202ENST00000509101 FGF20Q9NP95 211 aaPredicted RBP12.16□□□□□ -0.46
CXCL1-202ENST00000509101 ABRACLQ9P1F3 81 aa12.16□□□□□ -0.46
CXCL1-202ENST00000509101 SLC23A1Q9UHI7 598 aa12.16□□□□□ -0.46
CXCL1-202ENST00000509101 A0A1W2PPK0 400 aa12.15□□□□□ -0.46
CXCL1-202ENST00000509101 SHISA3A0PJX4 238 aa12.15□□□□□ -0.46
CXCL1-202ENST00000509101 SLC22A1O15245 554 aa12.15□□□□□ -0.46
CXCL1-202ENST00000509101 OGG1O15527 345 aa12.15□□□□□ -0.46
CXCL1-202ENST00000509101 LALBAP00709 142 aa12.15□□□□□ -0.46
CXCL1-202ENST00000509101 GNAO1P09471 354 aa12.15□□□□□ -0.46
CXCL1-202ENST00000509101 MC5RP33032 325 aa12.15□□□□□ -0.46
CXCL1-202ENST00000509101 TTC23Q5W5X9 447 aa12.15□□□□□ -0.46
CXCL1-202ENST00000509101 ZFP41Q8N8Y5 198 aa12.15□□□□□ -0.46
CXCL1-202ENST00000509101 OR5T1Q8NG75 326 aa12.15□□□□□ -0.46
CXCL1-202ENST00000509101 GHSRQ92847 366 aa12.15□□□□□ -0.46
CXCL1-202ENST00000509101 SULT4A1Q9BR01 284 aa12.15□□□□□ -0.46
CXCL1-202ENST00000509101 C8orf4Q9NR00 106 aa12.15□□□□□ -0.46
CXCL1-202ENST00000509101 A0A0G2JLM5 398 aa12.14□□□□□ -0.47
CXCL1-202ENST00000509101 H3BUA1 57 aa12.14□□□□□ -0.47
CXCL1-202ENST00000509101 TRBV12-3P01733 135 aa12.14□□□□□ -0.47
CXCL1-202ENST00000509101 CSN3P07498 182 aa12.14□□□□□ -0.47
CXCL1-202ENST00000509101 CD81P60033 236 aa12.14□□□□□ -0.47
CXCL1-202ENST00000509101 RPS11P62280 158 aaKnown RBP eCLIP12.14□□□□□ -0.47
CXCL1-202ENST00000509101 FXYD3Q14802 87 aa12.14□□□□□ -0.47
CXCL1-202ENST00000509101 MOGAT2Q3SYC2 334 aa12.14□□□□□ -0.47
CXCL1-202ENST00000509101 LAIR2Q6ISS4 152 aa12.14□□□□□ -0.47
CXCL1-202ENST00000509101 DRAXINQ8NBI3 349 aaPredicted RBP12.14□□□□□ -0.47
CXCL1-202ENST00000509101 OR5AN1Q8NGI8 311 aa12.14□□□□□ -0.47
CXCL1-202ENST00000509101 LINC00476Q8WZB0 136 aa12.14□□□□□ -0.47
CXCL1-202ENST00000509101 LRRC42Q9Y546 428 aa12.14□□□□□ -0.47
CXCL1-202ENST00000509101 TRBV5-7A0A0A0MS05 114 aa12.13□□□□□ -0.47
CXCL1-202ENST00000509101 SPDEFO95238 335 aa12.13□□□□□ -0.47
CXCL1-202ENST00000509101 IGKV1-16P04430 117 aa12.13□□□□□ -0.47
CXCL1-202ENST00000509101 CPEP16870 476 aa12.13□□□□□ -0.47
CXCL1-202ENST00000509101 CAPGP40121 348 aa12.13□□□□□ -0.47
CXCL1-202ENST00000509101 YIF1BQ5BJH7 314 aa12.13□□□□□ -0.47
CXCL1-202ENST00000509101 RNLSQ5VYX0 342 aa12.13□□□□□ -0.47
CXCL1-202ENST00000509101 LINC00322Q6ZN03 302 aaPredicted RBP12.13□□□□□ -0.47
CXCL1-202ENST00000509101 SVOPQ8N4V2 548 aa12.13□□□□□ -0.47
CXCL1-202ENST00000509101 SETD6Q8TBK2 473 aa12.13□□□□□ -0.47
CXCL1-202ENST00000509101 PGLYRP3Q96LB9 341 aa12.13□□□□□ -0.47
CXCL1-202ENST00000509101 NEDD4LQ96PU5 975 aa12.13□□□□□ -0.47
CXCL1-202ENST00000509101 TSNAXQ99598 290 aaKnown RBP12.13□□□□□ -0.47
CXCL1-202ENST00000509101 RNF5Q99942 180 aa12.13□□□□□ -0.47
CXCL1-202ENST00000509101 BABAM2Q9NXR7 383 aa12.13□□□□□ -0.47
CXCL1-202ENST00000509101 HERC2O95714 4834 aa12.13□□□□□ -0.47
CXCL1-202ENST00000509101 SLC25A17O43808 307 aa12.12□□□□□ -0.47
CXCL1-202ENST00000509101 RPS16P62249 146 aaKnown RBP12.12□□□□□ -0.47
CXCL1-202ENST00000509101 SSBP2P81877 361 aaPredicted RBP12.12□□□□□ -0.47
CXCL1-202ENST00000509101 RPEL1Q2QD12 228 aa12.12□□□□□ -0.47
CXCL1-202ENST00000509101 C6orf201Q7Z4U5 140 aa12.12□□□□□ -0.47
CXCL1-202ENST00000509101 NEURL2Q9BR09 285 aa12.12□□□□□ -0.47
CXCL1-202ENST00000509101 FAAP24Q9BTP7 215 aa12.12□□□□□ -0.47
CXCL1-202ENST00000509101 WFDC10AQ9H1F0 79 aa12.12□□□□□ -0.47
CXCL1-202ENST00000509101 CHMP1AQ9HD42 196 aaPredicted RBP12.12□□□□□ -0.47
CXCL1-202ENST00000509101 SIGLEC8Q9NYZ4 499 aa12.12□□□□□ -0.47
CXCL1-202ENST00000509101 PEF1Q9UBV8 284 aaKnown RBP12.12□□□□□ -0.47
CXCL1-202ENST00000509101 PNMA8CA0A1B0GUJ8 204 aa12.11□□□□□ -0.47
CXCL1-202ENST00000509101 TPPPO94811 219 aa12.11□□□□□ -0.47
CXCL1-202ENST00000509101 CNIH1O95406 144 aa12.11□□□□□ -0.47
CXCL1-202ENST00000509101 BRI3O95415 125 aa12.11□□□□□ -0.47
CXCL1-202ENST00000509101 DCKP27707 260 aa12.11□□□□□ -0.47
CXCL1-202ENST00000509101 LINC00205P59089 165 aa12.11□□□□□ -0.47
CXCL1-202ENST00000509101 DYRK1AQ13627 763 aa12.11□□□□□ -0.47
CXCL1-202ENST00000509101 CDH26Q8IXH8 852 aa12.11□□□□□ -0.47
CXCL1-202ENST00000509101 SETD9Q8NE22 299 aa12.11□□□□□ -0.47
CXCL1-202ENST00000509101 BVESQ8NE79 360 aa12.11□□□□□ -0.47
CXCL1-202ENST00000509101 GGHQ92820 318 aa12.11□□□□□ -0.47
CXCL1-202ENST00000509101 AGMATQ9BSE5 352 aa12.11□□□□□ -0.47
CXCL1-202ENST00000509101 OR1A1Q9P1Q5 309 aa12.11□□□□□ -0.47
CXCL1-202ENST00000509101 CLEC2DQ9UHP7 191 aa12.11□□□□□ -0.47
CXCL1-202ENST00000509101 RBMY1BA6NDE4 496 aaKnown RBP12.1□□□□□ -0.47
CXCL1-202ENST00000509101 RBMY1EA6NEQ0 496 aaKnown RBP12.1□□□□□ -0.47
CXCL1-202ENST00000509101 OR2A4O95047 310 aa12.1□□□□□ -0.47
CXCL1-202ENST00000509101 LY6G6CO95867 125 aa12.1□□□□□ -0.47
CXCL1-202ENST00000509101 CD7P09564 240 aa12.1□□□□□ -0.47
CXCL1-202ENST00000509101 RBMY1DP0C7P1 496 aaKnown RBP12.1□□□□□ -0.47
CXCL1-202ENST00000509101 MYL12AP19105 171 aa12.1□□□□□ -0.47
CXCL1-202ENST00000509101 AADACP22760 399 aa12.1□□□□□ -0.47
CXCL1-202ENST00000509101 TATDN3Q17R31 274 aa12.1□□□□□ -0.47
CXCL1-202ENST00000509101 OR10K2Q6IF99 312 aa12.1□□□□□ -0.47
CXCL1-202ENST00000509101 ZNF343Q6P1L6 599 aa12.1□□□□□ -0.47
CXCL1-202ENST00000509101 C8orf59Q8N0T1 100 aaPredicted RBP12.1□□□□□ -0.47
CXCL1-202ENST00000509101 DEFB125Q8N687 156 aa12.1□□□□□ -0.47
CXCL1-202ENST00000509101 NKAIN3Q8N8D7 197 aa12.1□□□□□ -0.47
CXCL1-202ENST00000509101 OR2K2Q8NGT1 345 aa12.1□□□□□ -0.47
CXCL1-202ENST00000509101 FBLIM1Q8WUP2 373 aa12.1□□□□□ -0.47
CXCL1-202ENST00000509101 DERL3Q96Q80 235 aa12.1□□□□□ -0.47
CXCL1-202ENST00000509101 TINAGL1Q9GZM7 467 aaPredicted RBP12.1□□□□□ -0.47
CXCL1-202ENST00000509101 SRD5A3Q9H8P0 318 aa12.1□□□□□ -0.47
CXCL1-202ENST00000509101 ITGB1BP1O14713 200 aa12.09□□□□□ -0.47
CXCL1-202ENST00000509101 NAPSAO96009 420 aa12.09□□□□□ -0.47
CXCL1-202ENST00000509101 APOA2P02652 100 aa12.09□□□□□ -0.47
CXCL1-202ENST00000509101 AQP4P55087 323 aa12.09□□□□□ -0.47
CXCL1-202ENST00000509101 PJVKQ0ZLH3 352 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms