RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 ODF3L1Q8IXM7 274 aa7.33□□□□□ -1.24
NUP54-207ENST00000508583 C3orf56Q8N813 242 aa7.33□□□□□ -1.24
NUP54-207ENST00000508583 OR5AP2Q8NGF4 316 aa7.33□□□□□ -1.24
NUP54-207ENST00000508583 OR5H2Q8NGV7 314 aa7.33□□□□□ -1.24
NUP54-207ENST00000508583 OR8U1Q8NH10 309 aa7.33□□□□□ -1.24
NUP54-207ENST00000508583 GPX8Q8TED1 209 aa7.33□□□□□ -1.24
NUP54-207ENST00000508583 FCAMRQ8WWV6 532 aa7.33□□□□□ -1.24
NUP54-207ENST00000508583 CFHR4Q92496 578 aa7.33□□□□□ -1.24
NUP54-207ENST00000508583 DIRAS2Q96HU8 199 aa7.33□□□□□ -1.24
NUP54-207ENST00000508583 SLIRPQ9GZT3 109 aaKnown RBP7.33□□□□□ -1.24
NUP54-207ENST00000508583 OR2D2Q9H210 308 aa7.33□□□□□ -1.24
NUP54-207ENST00000508583 C16orf95Q9H693 158 aa7.33□□□□□ -1.24
NUP54-207ENST00000508583 OR2W1Q9Y3N9 320 aa7.33□□□□□ -1.24
NUP54-207ENST00000508583 CHST1O43916 411 aa7.32□□□□□ -1.24
NUP54-207ENST00000508583 RRASP10301 218 aa7.32□□□□□ -1.24
NUP54-207ENST00000508583 NAT1P18440 290 aa7.32□□□□□ -1.24
NUP54-207ENST00000508583 S100GP29377 79 aa7.32□□□□□ -1.24
NUP54-207ENST00000508583 HERV-K104P61576 105 aa7.32□□□□□ -1.24
NUP54-207ENST00000508583 IL18Q14116 193 aa7.32□□□□□ -1.24
NUP54-207ENST00000508583 EBI3Q14213 229 aa7.32□□□□□ -1.24
NUP54-207ENST00000508583 DIAPH2-AS1Q14236 149 aa7.32□□□□□ -1.24
NUP54-207ENST00000508583 MSMO1Q15800 293 aa7.32□□□□□ -1.24
NUP54-207ENST00000508583 RTL8BQ17RB0 113 aa7.32□□□□□ -1.24
NUP54-207ENST00000508583 TMEM17Q86X19 198 aa7.32□□□□□ -1.24
NUP54-207ENST00000508583 Q8N2B8 174 aa7.32□□□□□ -1.24
NUP54-207ENST00000508583 ZNF645Q8N7E2 425 aa7.32□□□□□ -1.24
NUP54-207ENST00000508583 GVQW1Q8N7I0 195 aa7.32□□□□□ -1.24
NUP54-207ENST00000508583 ABHD14BQ96IU4 210 aa7.32□□□□□ -1.24
NUP54-207ENST00000508583 RNF5Q99942 180 aa7.32□□□□□ -1.24
NUP54-207ENST00000508583 DCUN1D5Q9BTE7 237 aa7.32□□□□□ -1.24
NUP54-207ENST00000508583 MRPL20Q9BYC9 149 aaKnown RBP7.32□□□□□ -1.24
NUP54-207ENST00000508583 NXF2Q9GZY0 626 aaKnown RBP7.32□□□□□ -1.24
NUP54-207ENST00000508583 TAS2R8Q9NYW2 309 aa7.32□□□□□ -1.24
NUP54-207ENST00000508583 EHFQ9NZC4 300 aa7.32□□□□□ -1.24
NUP54-207ENST00000508583 KIAA1456Q9P272 454 aa7.32□□□□□ -1.24
NUP54-207ENST00000508583 ZNF107Q9UII5 783 aaPredicted RBP7.32□□□□□ -1.24
NUP54-207ENST00000508583 ANAPC10Q9UM13 185 aa7.32□□□□□ -1.24
NUP54-207ENST00000508583 WASHC3Q9Y3C0 194 aa7.32□□□□□ -1.24
NUP54-207ENST00000508583 RNF114Q9Y508 228 aa7.32□□□□□ -1.24
NUP54-207ENST00000508583 IGKV1D-8A0A087WSZ0 117 aa7.31□□□□□ -1.24
NUP54-207ENST00000508583 IGHV3-72A0A0B4J1Y9 119 aa7.31□□□□□ -1.24
NUP54-207ENST00000508583 MEIS3P1A6NDR6 274 aa7.31□□□□□ -1.24
NUP54-207ENST00000508583 NCBP2LA6PVI3 153 aaKnown RBP7.31□□□□□ -1.24
NUP54-207ENST00000508583 ZNF736B4DX44 427 aaPredicted RBP7.31□□□□□ -1.24
NUP54-207ENST00000508583 GABARAPH6UMI1 98 aa7.31□□□□□ -1.24
NUP54-207ENST00000508583 H7C2Y5 167 aa7.31□□□□□ -1.24
NUP54-207ENST00000508583 M0R1X1 148 aa7.31□□□□□ -1.24
NUP54-207ENST00000508583 CTDSP2O14595 271 aa7.31□□□□□ -1.24
NUP54-207ENST00000508583 CTDSPLO15194 276 aa7.31□□□□□ -1.24
NUP54-207ENST00000508583 NFYAP23511 347 aaPredicted RBP7.31□□□□□ -1.24
NUP54-207ENST00000508583 CD24P25063 80 aa7.31□□□□□ -1.24
NUP54-207ENST00000508583 FCGR2CP31995 323 aa7.31□□□□□ -1.24
NUP54-207ENST00000508583 THBS3P49746 956 aa7.31□□□□□ -1.24
NUP54-207ENST00000508583 TSPAN5P62079 268 aa7.31□□□□□ -1.24
NUP54-207ENST00000508583 HNF4GQ14541 408 aa7.31□□□□□ -1.24
NUP54-207ENST00000508583 RPL39P5Q59GN2 51 aa7.31□□□□□ -1.24
NUP54-207ENST00000508583 FAM53AQ6NSI3 398 aaPredicted RBP7.31□□□□□ -1.24
NUP54-207ENST00000508583 CCBE1Q6UXH8 406 aaPredicted RBP7.31□□□□□ -1.24
NUP54-207ENST00000508583 Q6ZSV7 163 aa7.31□□□□□ -1.24
NUP54-207ENST00000508583 PDPNQ86YL7 162 aa7.31□□□□□ -1.24
NUP54-207ENST00000508583 ZBTB34Q8NCN2 500 aa7.31□□□□□ -1.24
NUP54-207ENST00000508583 OR5AN1Q8NGI8 311 aa7.31□□□□□ -1.24
NUP54-207ENST00000508583 LINC01006Q8NI28 216 aa7.31□□□□□ -1.24
NUP54-207ENST00000508583 GIMAP1Q8WWP7 306 aa7.31□□□□□ -1.24
NUP54-207ENST00000508583 TAF15Q92804 592 aaKnown RBP eCLIP7.31□□□□□ -1.24
NUP54-207ENST00000508583 SNAPC3Q92966 411 aa7.31□□□□□ -1.24
NUP54-207ENST00000508583 EAF1Q96JC9 268 aaPredicted RBP7.31□□□□□ -1.24
NUP54-207ENST00000508583 HSD17B10Q99714 261 aaKnown RBP7.31□□□□□ -1.24
NUP54-207ENST00000508583 RASL11BQ9BPW5 248 aa7.31□□□□□ -1.24
NUP54-207ENST00000508583 NABP2Q9BQ15 211 aa7.31□□□□□ -1.24
NUP54-207ENST00000508583 ZNF251Q9BRH9 671 aa7.31□□□□□ -1.24
NUP54-207ENST00000508583 RNF150Q9ULK6 438 aa7.31□□□□□ -1.24
NUP54-207ENST00000508583 PRELID3BQ9Y3B1 194 aa7.31□□□□□ -1.24
NUP54-207ENST00000508583 FABP12A6NFH5 140 aa7.3□□□□□ -1.24
NUP54-207ENST00000508583 H0YJW9 148 aa7.3□□□□□ -1.24
NUP54-207ENST00000508583 KCNAB3O43448 404 aa7.3□□□□□ -1.24
NUP54-207ENST00000508583 TUSC2O75896 110 aa7.3□□□□□ -1.24
NUP54-207ENST00000508583 PPYP01298 95 aa7.3□□□□□ -1.24
NUP54-207ENST00000508583 IFNA6P05013 189 aa7.3□□□□□ -1.24
NUP54-207ENST00000508583 CT45A6P0DMU7 189 aa7.3□□□□□ -1.24
NUP54-207ENST00000508583 CT45A5P0DMU8 189 aa7.3□□□□□ -1.24
NUP54-207ENST00000508583 CT45A7P0DMV0 189 aa7.3□□□□□ -1.24
NUP54-207ENST00000508583 PTHLHP12272 177 aa7.3□□□□□ -1.24
NUP54-207ENST00000508583 MDKP21741 143 aaPredicted RBP7.3□□□□□ -1.24
NUP54-207ENST00000508583 PTBP1P26599 531 aaKnown RBP eCLIP7.3□□□□□ -1.249e-7■■□□□ 12.2
NUP54-207ENST00000508583 HRH1P35367 487 aa7.3□□□□□ -1.24
NUP54-207ENST00000508583 VDAC2P45880 294 aaPredicted RBP7.3□□□□□ -1.24
NUP54-207ENST00000508583 TAS2R19P59542 299 aa7.3□□□□□ -1.24
NUP54-207ENST00000508583 RELBQ01201 579 aa7.3□□□□□ -1.24
NUP54-207ENST00000508583 DYRK1AQ13627 763 aa7.3□□□□□ -1.24
NUP54-207ENST00000508583 MMDQ15546 238 aa7.3□□□□□ -1.24
NUP54-207ENST00000508583 ABCA11PQ4W5N1 156 aa7.3□□□□□ -1.24
NUP54-207ENST00000508583 SPANXN2Q5MJ10 180 aa7.3□□□□□ -1.24
NUP54-207ENST00000508583 LPCAT3Q6P1A2 487 aa7.3□□□□□ -1.24
NUP54-207ENST00000508583 SHISA2Q6UWI4 295 aa7.3□□□□□ -1.24
NUP54-207ENST00000508583 OVCH2Q7RTZ1 564 aa7.3□□□□□ -1.24
NUP54-207ENST00000508583 C5orf24Q7Z6I8 188 aa7.3□□□□□ -1.24
NUP54-207ENST00000508583 C5orf56Q8N8D9 126 aa7.3□□□□□ -1.24
NUP54-207ENST00000508583 OR6F1Q8NGZ6 308 aa7.3□□□□□ -1.24
NUP54-207ENST00000508583 SMIM4Q8WVI0 70 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms