RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 SMAD9O15198 467 aaKnown RBP3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 HCRTR1O43613 425 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 SLC25A17O43808 307 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 YPEL1O60688 119 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 NPIPB7O75200 414 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 ALOX12BO75342 701 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 UPK3AO75631 287 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 RENP00797 406 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 ISG15P05161 165 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 LGALS2P05162 132 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 HMGN2P05204 90 aaKnown RBP3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 HPNP05981 417 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 CRYGCP07315 174 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 ERGP11308 486 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 UCP1P25874 307 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 TSPOP30536 169 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 BSGP35613 385 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 PPP1CCP36873 323 aaKnown RBP3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 PSMB10P40306 273 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 APOBEC1P41238 236 aaKnown RBP3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 CYB561P49447 251 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 PSMB3P49720 205 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 GPM6AP51674 278 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 EMP2P54851 167 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 ATP5IP56385 69 aaPredicted RBP3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 YPEL3P61236 119 aaPredicted RBP3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 TBPL1P62380 186 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 RPS15P62841 145 aaKnown RBP3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 SEC11AP67812 179 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 CEBPEQ15744 281 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 HNRNPA1L2Q32P51 320 aaKnown RBP3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 ARHGAP11BQ3KRB8 267 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 OR10J3Q5JRS4 329 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 SPIN3Q5JUX0 258 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 GLYATL3Q5SZD4 288 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 DCST2Q5T1A1 773 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 PMS2CLQ68D20 193 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 SYT13Q7L8C5 426 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 LHFPL1Q86WI0 220 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 CDC20BQ86Y33 519 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 ZNF440Q8IYI8 595 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 LGI3Q8N145 548 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 C17orf78Q8N4C9 275 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 ZNF709Q8N972 641 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 MRPL43Q8N983 215 aaKnown RBP3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 DCAF4L2Q8NA75 395 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 Q8NFD4 153 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 OR10P1Q8NGE3 313 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 OR10S1Q8NGN2 331 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 OR1K1Q8NGR3 316 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 OR6K6Q8NGW6 343 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 OR6N2Q8NGY6 317 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 PPTC7Q8NI37 304 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 KCNG3Q8TAE7 436 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 ZNF519Q8TB69 540 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 MBD3L1Q8WWY6 194 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 FGF13Q92913 245 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 IGSF8Q969P0 613 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 ERGIC1Q969X5 290 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 BORCS7Q96B45 105 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 TMEM186Q96B77 213 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 C4orf45Q96LM5 186 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 UHRF2Q96PU4 802 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 YPEL2Q96QA6 119 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 SIGMAR1Q99720 223 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 NKX3-1Q99801 234 aaPredicted RBP3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 CCDC3Q9BQI4 270 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 SPXQ9BT56 116 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 LPAR5Q9H1C0 372 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 CXCL16Q9H2A7 254 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 ARRDC1-AS1Q9H2J1 176 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 C5orf66Q9H5L9 145 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 ZDHHC6Q9H6R6 413 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 MED20Q9H944 212 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 MBNL1Q9NR56 388 aaKnown RBP3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 EHFQ9NZC4 300 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 CD84Q9UIB8 345 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 HSF4Q9ULV5 492 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 RNF24Q9Y225 148 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 PIN4Q9Y237 131 aaKnown RBP3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 MRPS2Q9Y399 296 aaKnown RBP3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 LSM5Q9Y4Y9 91 aaKnown RBP3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 PXMP4Q9Y6I8 212 aa3.84□□□□□ -1.79
PDLIM5-211ENST00000508531 PIEZO2Q9H5I5 2752 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 TRAV8-7A0A075B6U6 113 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 IGLC7A0M8Q6 106 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 ZNF320A2RRD8 509 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 MEIS3P1A6NDR6 274 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 CRYM-AS1A6NIL9 109 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 OR11H12B2RN74 326 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 HS3ST1O14792 307 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 NDUFS4O43181 175 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 HCRTO43612 131 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 ZNF207O43670 478 aaKnown RBP3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 CD5LO43866 347 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 PDE6DO43924 150 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 EPPINO95925 133 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 HLA-DRB1P01911 266 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 IGHV4-30-4P0DP06 118 aa3.83□□□□□ -1.8
PDLIM5-211ENST00000508531 CRISP2P16562 243 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms