RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 FOXE3Q13461 319 aa12.67□□□□□ -0.38
LMNA-222ENST00000508500 KIAA0141Q14154 515 aaPredicted RBP12.67□□□□□ -0.38
LMNA-222ENST00000508500 ZNF846Q147U1 533 aa12.67□□□□□ -0.38
LMNA-222ENST00000508500 KCNG3Q8TAE7 436 aa12.67□□□□□ -0.38
LMNA-222ENST00000508500 GALMQ96C23 342 aa12.67□□□□□ -0.38
LMNA-222ENST00000508500 HDHD3Q9BSH5 251 aaPredicted RBP12.67□□□□□ -0.38
LMNA-222ENST00000508500 C6orf62Q9GZU0 229 aaPredicted RBP12.67□□□□□ -0.38
LMNA-222ENST00000508500 RABL2AQ9UBK7 228 aaPredicted RBP12.67□□□□□ -0.38
LMNA-222ENST00000508500 ZNF107Q9UII5 783 aaPredicted RBP12.67□□□□□ -0.38
LMNA-222ENST00000508500 RABL2BQ9UNT1 228 aa12.67□□□□□ -0.38
LMNA-222ENST00000508500 SORL1Q92673 2214 aa12.67□□□□□ -0.38
LMNA-222ENST00000508500 TENM3Q9P273 2699 aa12.67□□□□□ -0.38
LMNA-222ENST00000508500 ST8SIA5O15466 376 aa12.66□□□□□ -0.38
LMNA-222ENST00000508500 PTBP1P26599 531 aaKnown RBP eCLIP12.66□□□□□ -0.38
LMNA-222ENST00000508500 PSMB8P28062 276 aa12.66□□□□□ -0.38
LMNA-222ENST00000508500 BLVRBP30043 206 aaPredicted RBP12.66□□□□□ -0.38
LMNA-222ENST00000508500 TMEM50BP56557 158 aa12.66□□□□□ -0.38
LMNA-222ENST00000508500 KIR2DS1Q14954 304 aa12.66□□□□□ -0.38
LMNA-222ENST00000508500 MMDQ15546 238 aa12.66□□□□□ -0.38
LMNA-222ENST00000508500 CXorf66Q5JRM2 361 aaPredicted RBP12.66□□□□□ -0.38
LMNA-222ENST00000508500 MYOZ3Q8TDC0 251 aa12.66□□□□□ -0.38
LMNA-222ENST00000508500 ZNF580Q9UK33 172 aa12.66□□□□□ -0.38
LMNA-222ENST00000508500 AK6Q9Y3D8 172 aaKnown RBP12.66□□□□□ -0.38
LMNA-222ENST00000508500 IGHV7-81A0A0B4J1V7 117 aa12.65□□□□□ -0.38
LMNA-222ENST00000508500 IFITM5A6NNB3 132 aa12.65□□□□□ -0.38
LMNA-222ENST00000508500 G3V318 75 aa12.65□□□□□ -0.38
LMNA-222ENST00000508500 BPNT1O95861 308 aa12.65□□□□□ -0.38
LMNA-222ENST00000508500 SNRPBP14678 240 aaKnown RBP12.65□□□□□ -0.38
LMNA-222ENST00000508500 P2RY14Q15391 338 aa12.65□□□□□ -0.38
LMNA-222ENST00000508500 DEFB121Q5J5C9 76 aa12.65□□□□□ -0.38
LMNA-222ENST00000508500 C11orf87Q6NUJ2 197 aa12.65□□□□□ -0.38
LMNA-222ENST00000508500 NR2C2APQ86WQ0 139 aa12.65□□□□□ -0.38
LMNA-222ENST00000508500 FAM89BQ8N5H3 189 aa12.65□□□□□ -0.38
LMNA-222ENST00000508500 NPBQ8NG41 125 aa12.65□□□□□ -0.38
LMNA-222ENST00000508500 OR6M1Q8NGM8 313 aa12.65□□□□□ -0.38
LMNA-222ENST00000508500 AGMATQ9BSE5 352 aa12.65□□□□□ -0.38
LMNA-222ENST00000508500 GON7Q9BXV9 100 aa12.65□□□□□ -0.38
LMNA-222ENST00000508500 KLK15Q9H2R5 256 aa12.65□□□□□ -0.38
LMNA-222ENST00000508500 PALMDQ9NP74 551 aa12.65□□□□□ -0.38
LMNA-222ENST00000508500 AKIP1Q9NQ31 210 aa12.65□□□□□ -0.38
LMNA-222ENST00000508500 AK3Q9UIJ7 227 aa12.65□□□□□ -0.38
LMNA-222ENST00000508500 ETV7Q9Y603 341 aa12.65□□□□□ -0.38
LMNA-222ENST00000508500 TRBV6-6A0A0A6YYG2 114 aa12.64□□□□□ -0.39
LMNA-222ENST00000508500 SLC17A2O00624 439 aa12.64□□□□□ -0.39
LMNA-222ENST00000508500 ATP6V0E1O15342 81 aa12.64□□□□□ -0.39
LMNA-222ENST00000508500 PROP1O75360 226 aa12.64□□□□□ -0.39
LMNA-222ENST00000508500 NDUFA3O95167 84 aa12.64□□□□□ -0.39
LMNA-222ENST00000508500 HLA-DRB1P01911 266 aa12.64□□□□□ -0.39
LMNA-222ENST00000508500 CT45A6P0DMU7 189 aa12.64□□□□□ -0.39
LMNA-222ENST00000508500 CT45A5P0DMU8 189 aa12.64□□□□□ -0.39
LMNA-222ENST00000508500 CT45A7P0DMV0 189 aa12.64□□□□□ -0.39
LMNA-222ENST00000508500 VDAC1P21796 283 aa12.64□□□□□ -0.39
LMNA-222ENST00000508500 CD40LGP29965 261 aa12.64□□□□□ -0.39
LMNA-222ENST00000508500 PLA2G7Q13093 441 aa12.64□□□□□ -0.39
LMNA-222ENST00000508500 RPL39P5Q59GN2 51 aa12.64□□□□□ -0.39
LMNA-222ENST00000508500 SPANXN2Q5MJ10 180 aa12.64□□□□□ -0.39
LMNA-222ENST00000508500 VAX1Q5SQQ9 334 aa12.64□□□□□ -0.39
LMNA-222ENST00000508500 IDNKQ5T6J7 187 aa12.64□□□□□ -0.39
LMNA-222ENST00000508500 OR2AK2Q8NG84 335 aa12.64□□□□□ -0.39
LMNA-222ENST00000508500 IL1F10Q8WWZ1 152 aa12.64□□□□□ -0.39
LMNA-222ENST00000508500 MCRIP2Q9BUT9 160 aaKnown RBP12.64□□□□□ -0.39
LMNA-222ENST00000508500 OR51J1Q9H342 316 aa12.64□□□□□ -0.39
LMNA-222ENST00000508500 PLGRKTQ9HBL7 147 aa12.64□□□□□ -0.39
LMNA-222ENST00000508500 PLEKHJ1Q9NW61 149 aa12.64□□□□□ -0.39
LMNA-222ENST00000508500 OR1A1Q9P1Q5 309 aa12.64□□□□□ -0.39
LMNA-222ENST00000508500 SPATA2Q9UM82 520 aa12.64□□□□□ -0.39
LMNA-222ENST00000508500 FBXO7Q9Y3I1 522 aa12.64□□□□□ -0.39
LMNA-222ENST00000508500 WSB1Q9Y6I7 421 aa12.64□□□□□ -0.39
LMNA-222ENST00000508500 RYR3Q15413 4870 aa12.64□□□□□ -0.39
LMNA-222ENST00000508500 NBR2O15453 112 aa12.63□□□□□ -0.39
LMNA-222ENST00000508500 RGS5O15539 181 aa12.63□□□□□ -0.39
LMNA-222ENST00000508500 RGS11O94810 467 aa12.63□□□□□ -0.39
LMNA-222ENST00000508500 TPPPO94811 219 aa12.63□□□□□ -0.39
LMNA-222ENST00000508500 LUMP51884 338 aaPredicted RBP12.63□□□□□ -0.39
LMNA-222ENST00000508500 CLDN12P56749 244 aa12.63□□□□□ -0.39
LMNA-222ENST00000508500 NDPQ00604 133 aa12.63□□□□□ -0.39
LMNA-222ENST00000508500 FHL3Q13643 280 aa12.63□□□□□ -0.39
LMNA-222ENST00000508500 C5orf64Q2M2E5 130 aa12.63□□□□□ -0.39
LMNA-222ENST00000508500 ASPHD1Q5U4P2 390 aa12.63□□□□□ -0.39
LMNA-222ENST00000508500 GLDNQ6ZMI3 551 aaPredicted RBP12.63□□□□□ -0.39
LMNA-222ENST00000508500 CCDC190Q86UF4 302 aa12.63□□□□□ -0.39
LMNA-222ENST00000508500 OR8U1Q8NH10 309 aa12.63□□□□□ -0.39
LMNA-222ENST00000508500 SETD6Q8TBK2 473 aa12.63□□□□□ -0.39
LMNA-222ENST00000508500 BORCS5Q969J3 196 aa12.63□□□□□ -0.39
LMNA-222ENST00000508500 ABHD14BQ96IU4 210 aa12.63□□□□□ -0.39
LMNA-222ENST00000508500 GPR61Q9BZJ8 451 aa12.63□□□□□ -0.39
LMNA-222ENST00000508500 GNB4Q9HAV0 340 aa12.63□□□□□ -0.39
LMNA-222ENST00000508500 STEAP1Q9UHE8 339 aa12.63□□□□□ -0.39
LMNA-222ENST00000508500 DAPK2Q9UIK4 370 aa12.63□□□□□ -0.39
LMNA-222ENST00000508500 CTDSP2O14595 271 aa12.62□□□□□ -0.39
LMNA-222ENST00000508500 LDLRAD4O15165 306 aa12.62□□□□□ -0.39
LMNA-222ENST00000508500 IGLV1-40P01703 118 aa12.62□□□□□ -0.39
LMNA-222ENST00000508500 APOA1P02647 267 aa12.62□□□□□ -0.39
LMNA-222ENST00000508500 SCTP09683 121 aa12.62□□□□□ -0.39
LMNA-222ENST00000508500 ARSBP15848 533 aa12.62□□□□□ -0.39
LMNA-222ENST00000508500 TNFSF8P32971 234 aa12.62□□□□□ -0.39
LMNA-222ENST00000508500 RAB25P57735 213 aa12.62□□□□□ -0.39
LMNA-222ENST00000508500 OR10A3P58181 314 aa12.62□□□□□ -0.39
LMNA-222ENST00000508500 C19orf54Q5BKX5 351 aa12.62□□□□□ -0.39
LMNA-222ENST00000508500 PLAC9Q5JTB6 97 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms