RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 CSN2P05814 226 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 PRSS2P07478 247 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 UCHL1P09936 223 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 CD28P10747 220 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 GZMHP20718 246 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 CALRP27797 417 aaKnown RBP3.6□□□□□ -1.83
NUP54-206ENST00000508465 KIR2DS4P43632 304 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 HSPA13P48723 471 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 EFNB2P52799 333 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 CLDN12P56749 244 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 QRFPP83859 136 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 EMX1Q04741 257 aaPredicted RBP3.6□□□□□ -1.83
NUP54-206ENST00000508465 PLA2G7Q13093 441 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 GPR50Q13585 617 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 GPR176Q14439 515 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 SSX1Q16384 188 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 AANATQ16613 207 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 MPV17LQ2QL34 196 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 NSUN5P1Q3KNT7 163 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 C2orf76Q3KRA6 126 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 ANXA2RQ3ZCQ2 193 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 HSD17B12Q53GQ0 312 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 NHLRC3Q5JS37 347 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 C9orf152Q5JTZ5 239 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 RBM48Q5RL73 367 aaKnown RBP3.6□□□□□ -1.83
NUP54-206ENST00000508465 C1orf100Q5SVJ3 147 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 TPTE2P1Q5T6R2 138 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 SYT6Q5T7P8 510 aaPredicted RBP3.6□□□□□ -1.83
NUP54-206ENST00000508465 HES5Q5TA89 166 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 MINOS1Q5TGZ0 78 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 PRSS48Q7RTY5 328 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 C6orf201Q7Z4U5 140 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 MOB3BQ86TA1 216 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 CDH26Q8IXH8 852 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 DRAM1Q8N682 238 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 KLHDC1Q8N7A1 406 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 PRR26Q8N8Z3 221 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 OR10V1Q8NGI7 309 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 OR10X1Q8NGY0 326 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 ZNF596Q8TC21 504 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 CMTM3Q96MX0 182 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 CITED1Q99966 193 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 SULT4A1Q9BR01 284 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 UQCC2Q9BRT2 126 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 NICN1Q9BSH3 213 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 LINC00574Q9H8X3 128 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 ZNF702PQ9H963 129 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 ACOT13Q9NPJ3 140 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 TRAPPC2LQ9UL33 140 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 RAB26Q9ULW5 256 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 TCF19Q9Y242 345 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 TBL2Q9Y4P3 447 aaKnown RBP3.6□□□□□ -1.83
NUP54-206ENST00000508465 MINOS1-NBL1R4GNA1 71 aa3.6□□□□□ -1.83
NUP54-206ENST00000508465 A0A0B4J203 849 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 A0A0B4J293 547 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 GAGE12JA6NER3 117 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 ZNF736B4DX44 427 aaPredicted RBP3.59□□□□□ -1.83
NUP54-206ENST00000508465 TEX22C9J3V5 150 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 AIPO00170 330 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 SLC22A1O15245 554 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 ZNF780AO75290 641 aaPredicted RBP3.59□□□□□ -1.83
NUP54-206ENST00000508465 PDCD6O75340 191 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 SC5DO75845 299 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 IL1AP01583 271 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 HBZP02008 142 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 SNRNP70P08621 437 aaKnown RBP3.59□□□□□ -1.83
NUP54-206ENST00000508465 CD37P11049 281 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 MAPK3P27361 379 aaPredicted RBP3.59□□□□□ -1.83
NUP54-206ENST00000508465 CD34P28906 385 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 BLVRBP30043 206 aaPredicted RBP3.59□□□□□ -1.83
NUP54-206ENST00000508465 BRS3P32247 399 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 PPP1CCP36873 323 aaKnown RBP3.59□□□□□ -1.83
NUP54-206ENST00000508465 OR10A3P58181 314 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 MLLT11Q13015 90 aaPredicted RBP3.59□□□□□ -1.83
NUP54-206ENST00000508465 UNC119Q13432 240 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 MADCAM1Q13477 382 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 HES1Q14469 280 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 GNMTQ14749 295 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 RAB11BQ15907 218 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 HLA-DRB5Q30154 266 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 ABCA11PQ4W5N1 156 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 CT45A1Q5HYN5 189 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 GLT8D1Q68CQ7 371 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 C10orf99Q6UWK7 81 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 Q6ZTK2 550 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 CENPVQ7Z7K6 275 aaPredicted RBP3.59□□□□□ -1.83
NUP54-206ENST00000508465 OR51D1Q8NGF3 324 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 OR52L2PQ8NGH6 319 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 OR56B4Q8NH76 319 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 OR9G1Q8NH87 305 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 OR2T6Q8NHC8 308 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 CT45A3Q8NHU0 189 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 SETD6Q8TBK2 473 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 PHYHIPQ92561 330 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 TOMM40LQ969M1 308 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 RPEQ96AT9 228 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 MRPS24Q96EL2 167 aaKnown RBP3.59□□□□□ -1.83
NUP54-206ENST00000508465 NEDD4LQ96PU5 975 aa3.59□□□□□ -1.83
NUP54-206ENST00000508465 HDHD3Q9BSH5 251 aaPredicted RBP3.59□□□□□ -1.83
NUP54-206ENST00000508465 NPFFR1Q9GZQ6 430 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms