RNA–Protein interactions for RNA: ENST00000508459.5

HMGCLL1-208, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-208ENST00000508459 H0Y980 276 aa11.77□□□□□ -0.53
HMGCLL1-208ENST00000508459 BUB1B-PAK6H3BSN5 160 aa11.77□□□□□ -0.53
HMGCLL1-208ENST00000508459 HLA-AP01891 365 aaKnown RBP11.77□□□□□ -0.53
HMGCLL1-208ENST00000508459 IGHV4-31P0DP07 118 aa11.77□□□□□ -0.53
HMGCLL1-208ENST00000508459 MMP9P14780 707 aa11.77□□□□□ -0.53
HMGCLL1-208ENST00000508459 VAMP1P23763 118 aa11.77□□□□□ -0.53
HMGCLL1-208ENST00000508459 BRS3P32247 399 aa11.77□□□□□ -0.53
HMGCLL1-208ENST00000508459 GNG10P50151 68 aa11.77□□□□□ -0.53
HMGCLL1-208ENST00000508459 ZNF816Q0VGE8 651 aaPredicted RBP11.77□□□□□ -0.53
HMGCLL1-208ENST00000508459 TATDN3Q17R31 274 aa11.77□□□□□ -0.53
HMGCLL1-208ENST00000508459 ZNF833PQ6ZTB9 187 aa11.77□□□□□ -0.53
HMGCLL1-208ENST00000508459 LYG2Q86SG7 212 aa11.77□□□□□ -0.53
HMGCLL1-208ENST00000508459 LDLRAD3Q86YD5 345 aa11.77□□□□□ -0.53
HMGCLL1-208ENST00000508459 PNKDQ8N490 385 aa11.77□□□□□ -0.53
HMGCLL1-208ENST00000508459 WFDC11Q8NEX6 87 aa11.77□□□□□ -0.53
HMGCLL1-208ENST00000508459 OR4S2Q8NH73 311 aa11.77□□□□□ -0.53
HMGCLL1-208ENST00000508459 UBALD1Q8TB05 177 aa11.77□□□□□ -0.53
HMGCLL1-208ENST00000508459 NANPQ8TBE9 248 aa11.77□□□□□ -0.53
HMGCLL1-208ENST00000508459 ZNF431Q8TF32 576 aaPredicted RBP11.77□□□□□ -0.53
HMGCLL1-208ENST00000508459 MSI2Q96DH6 328 aaKnown RBP11.77□□□□□ -0.53
HMGCLL1-208ENST00000508459 MMP26Q9NRE1 261 aa11.77□□□□□ -0.53
HMGCLL1-208ENST00000508459 VSIG4Q9Y279 399 aa11.77□□□□□ -0.53
HMGCLL1-208ENST00000508459 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.77□□□□□ -0.53
HMGCLL1-208ENST00000508459 C3orf85A0A1B0GTC6 90 aa11.76□□□□□ -0.53
HMGCLL1-208ENST00000508459 ODF3BA8MYP8 253 aa11.76□□□□□ -0.53
HMGCLL1-208ENST00000508459 HSD17B6O14756 317 aa11.76□□□□□ -0.53
HMGCLL1-208ENST00000508459 PGLYRP1O75594 196 aaPredicted RBP11.76□□□□□ -0.53
HMGCLL1-208ENST00000508459 IFNA21P01568 189 aa11.76□□□□□ -0.53
HMGCLL1-208ENST00000508459 ZNF818PQ6ZRF7 136 aa11.76□□□□□ -0.53
HMGCLL1-208ENST00000508459 LGI3Q8N145 548 aa11.76□□□□□ -0.53
HMGCLL1-208ENST00000508459 ABHD14BQ96IU4 210 aa11.76□□□□□ -0.53
HMGCLL1-208ENST00000508459 RNF5Q99942 180 aa11.76□□□□□ -0.53
HMGCLL1-208ENST00000508459 RTBDNQ9BSG5 229 aaPredicted RBP11.76□□□□□ -0.53
HMGCLL1-208ENST00000508459 SIRT7Q9NRC8 400 aa11.76□□□□□ -0.53
HMGCLL1-208ENST00000508459 CCL28Q9NRJ3 127 aa11.76□□□□□ -0.53
HMGCLL1-208ENST00000508459 SDHAF2Q9NX18 166 aa11.76□□□□□ -0.53
HMGCLL1-208ENST00000508459 ITPR2Q14571 2701 aa11.76□□□□□ -0.53
HMGCLL1-208ENST00000508459 SAA2-SAA4A0A096LPE2 208 aa11.75□□□□□ -0.53
HMGCLL1-208ENST00000508459 IGKV1D-13A0A0B4J2D9 117 aa11.75□□□□□ -0.53
HMGCLL1-208ENST00000508459 IGHV1-69DA0A0B4J2H0 117 aa11.75□□□□□ -0.53
HMGCLL1-208ENST00000508459 MEX3AA1L020 520 aaKnown RBP11.75□□□□□ -0.53
HMGCLL1-208ENST00000508459 C7orf66A4D0T2 115 aa11.75□□□□□ -0.53
HMGCLL1-208ENST00000508459 M0R1X1 148 aa11.75□□□□□ -0.53
HMGCLL1-208ENST00000508459 SFT2D2O95562 160 aa11.75□□□□□ -0.53
HMGCLL1-208ENST00000508459 IGHV1-69P01742 117 aa11.75□□□□□ -0.53
HMGCLL1-208ENST00000508459 SAA2P0DJI9 122 aaPredicted RBP11.75□□□□□ -0.53
HMGCLL1-208ENST00000508459 IGKV1-13P0DP09 117 aa11.75□□□□□ -0.53
HMGCLL1-208ENST00000508459 HOXB4P17483 251 aaPredicted RBP11.75□□□□□ -0.53
HMGCLL1-208ENST00000508459 COX7A1P24310 79 aa11.75□□□□□ -0.53
HMGCLL1-208ENST00000508459 BAMBIQ13145 260 aa11.75□□□□□ -0.53
HMGCLL1-208ENST00000508459 DHRS2Q13268 280 aa11.75□□□□□ -0.53
HMGCLL1-208ENST00000508459 AANATQ16613 207 aa11.75□□□□□ -0.53
HMGCLL1-208ENST00000508459 PHLDA2Q53GA4 152 aa11.75□□□□□ -0.53
HMGCLL1-208ENST00000508459 Q6ZNX1 250 aa11.75□□□□□ -0.53
HMGCLL1-208ENST00000508459 TBC1D26Q86UD7 250 aa11.75□□□□□ -0.53
HMGCLL1-208ENST00000508459 PDPNQ86YL7 162 aa11.75□□□□□ -0.53
HMGCLL1-208ENST00000508459 FAM219AQ8IW50 185 aa11.75□□□□□ -0.53
HMGCLL1-208ENST00000508459 CADM3Q8N126 398 aa11.75□□□□□ -0.53
HMGCLL1-208ENST00000508459 TCTEX1D2Q8WW35 142 aa11.75□□□□□ -0.53
HMGCLL1-208ENST00000508459 LHX4Q969G2 390 aa11.75□□□□□ -0.53
HMGCLL1-208ENST00000508459 C18orf12Q96KH6 178 aa11.75□□□□□ -0.53
HMGCLL1-208ENST00000508459 TMEM222Q9H0R3 208 aa11.75□□□□□ -0.53
HMGCLL1-208ENST00000508459 TMEM160Q9NX00 188 aa11.75□□□□□ -0.53
HMGCLL1-208ENST00000508459 COMMD9Q9P000 198 aa11.75□□□□□ -0.53
HMGCLL1-208ENST00000508459 FAM96BQ9Y3D0 163 aa11.75□□□□□ -0.53
HMGCLL1-208ENST00000508459 C9orf170A2RU37 121 aa11.74□□□□□ -0.53
HMGCLL1-208ENST00000508459 NPFFO15130 113 aa11.74□□□□□ -0.53
HMGCLL1-208ENST00000508459 SSNA1O43805 119 aa11.74□□□□□ -0.53
HMGCLL1-208ENST00000508459 CD5LO43866 347 aa11.74□□□□□ -0.53
HMGCLL1-208ENST00000508459 MMP23AO75900 390 aa11.74□□□□□ -0.53
HMGCLL1-208ENST00000508459 HRASP01112 189 aa11.74□□□□□ -0.53
HMGCLL1-208ENST00000508459 TRAPPC2P0DI81 140 aa11.74□□□□□ -0.53
HMGCLL1-208ENST00000508459 TRAPPC2BP0DI82 140 aa11.74□□□□□ -0.53
HMGCLL1-208ENST00000508459 ZNF134P52741 427 aa11.74□□□□□ -0.53
HMGCLL1-208ENST00000508459 ERVK-16P61578 105 aa11.74□□□□□ -0.53
HMGCLL1-208ENST00000508459 CYCSP99999 105 aaKnown RBP11.74□□□□□ -0.53
HMGCLL1-208ENST00000508459 ZNF695Q8IW36 515 aa11.74□□□□□ -0.53
HMGCLL1-208ENST00000508459 LRTM2Q8N967 370 aa11.74□□□□□ -0.53
HMGCLL1-208ENST00000508459 MITD1Q8WV92 249 aa11.74□□□□□ -0.53
HMGCLL1-208ENST00000508459 MRGPRFQ96AM1 343 aa11.74□□□□□ -0.53
HMGCLL1-208ENST00000508459 TBX15Q96SF7 602 aa11.74□□□□□ -0.53
HMGCLL1-208ENST00000508459 SPIN2AQ99865 258 aa11.74□□□□□ -0.53
HMGCLL1-208ENST00000508459 SPIN2BQ9BPZ2 258 aa11.74□□□□□ -0.53
HMGCLL1-208ENST00000508459 PLEKHA2Q9HB19 425 aa11.74□□□□□ -0.53
HMGCLL1-208ENST00000508459 ZFP57Q9NU63 452 aa11.74□□□□□ -0.53
HMGCLL1-208ENST00000508459 RNF150Q9ULK6 438 aa11.74□□□□□ -0.53
HMGCLL1-208ENST00000508459 TMED3Q9Y3Q3 217 aa11.74□□□□□ -0.53
HMGCLL1-208ENST00000508459 HPRT1P00492 218 aa11.73□□□□□ -0.53
HMGCLL1-208ENST00000508459 FBP1P09467 338 aa11.73□□□□□ -0.53
HMGCLL1-208ENST00000508459 ANXA7P20073 488 aaKnown RBP11.73□□□□□ -0.53
HMGCLL1-208ENST00000508459 UCP1P25874 307 aa11.73□□□□□ -0.53
HMGCLL1-208ENST00000508459 DUTP33316 252 aaKnown RBP11.73□□□□□ -0.53
HMGCLL1-208ENST00000508459 TPTE2P1Q5T6R2 138 aa11.73□□□□□ -0.53
HMGCLL1-208ENST00000508459 C12orf45Q8N5I9 185 aaPredicted RBP11.73□□□□□ -0.53
HMGCLL1-208ENST00000508459 OR4P4Q8NGL7 312 aa11.73□□□□□ -0.53
HMGCLL1-208ENST00000508459 OR4C13Q8NGP0 309 aa11.73□□□□□ -0.53
HMGCLL1-208ENST00000508459 VSTM2AQ8TAG5 236 aa11.73□□□□□ -0.53
HMGCLL1-208ENST00000508459 OSR1Q8TAX0 266 aaPredicted RBP11.73□□□□□ -0.53
HMGCLL1-208ENST00000508459 ST6GALNAC6Q969X2 333 aa11.73□□□□□ -0.53
HMGCLL1-208ENST00000508459 RRNAD1Q96FB5 475 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms