RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 IGKV1-6A0A0C4DH72 117 aa10.07□□□□□ -0.8
HMGCS1-205ENST00000508319 A0A1W2PN81 502 aa10.07□□□□□ -0.8
HMGCS1-205ENST00000508319 FCN1O00602 326 aa10.07□□□□□ -0.8
HMGCS1-205ENST00000508319 RGS10O43665 173 aa10.07□□□□□ -0.8
HMGCS1-205ENST00000508319 PROP1O75360 226 aa10.07□□□□□ -0.8
HMGCS1-205ENST00000508319 RBBP9O75884 186 aa10.07□□□□□ -0.8
HMGCS1-205ENST00000508319 ARL6IP5O75915 188 aa10.07□□□□□ -0.8
HMGCS1-205ENST00000508319 SCTP09683 121 aa10.07□□□□□ -0.8
HMGCS1-205ENST00000508319 EGR2P11161 476 aaPredicted RBP10.07□□□□□ -0.8
HMGCS1-205ENST00000508319 SNRPBP14678 240 aaKnown RBP10.07□□□□□ -0.8
HMGCS1-205ENST00000508319 CPEP16870 476 aa10.07□□□□□ -0.8
HMGCS1-205ENST00000508319 ZBTB25P24278 435 aa10.07□□□□□ -0.8
HMGCS1-205ENST00000508319 CHRNA7P36544 502 aa10.07□□□□□ -0.8
HMGCS1-205ENST00000508319 CEACAM6P40199 344 aa10.07□□□□□ -0.8
HMGCS1-205ENST00000508319 CLDN12P56749 244 aa10.07□□□□□ -0.8
HMGCS1-205ENST00000508319 TRAM1Q15629 374 aa10.07□□□□□ -0.8
HMGCS1-205ENST00000508319 PLAC9Q5JTB6 97 aa10.07□□□□□ -0.8
HMGCS1-205ENST00000508319 TCTEX1D1Q8N7M0 179 aa10.07□□□□□ -0.8
HMGCS1-205ENST00000508319 DRAXINQ8NBI3 349 aaPredicted RBP10.07□□□□□ -0.8
HMGCS1-205ENST00000508319 CASTOR1Q8WTX7 329 aa10.07□□□□□ -0.8
HMGCS1-205ENST00000508319 EDARADDQ8WWZ3 215 aa10.07□□□□□ -0.8
HMGCS1-205ENST00000508319 PTX4Q96A99 478 aa10.07□□□□□ -0.8
HMGCS1-205ENST00000508319 TOLLIPQ9H0E2 274 aa10.07□□□□□ -0.8
HMGCS1-205ENST00000508319 GHITMQ9H3K2 345 aa10.07□□□□□ -0.8
HMGCS1-205ENST00000508319 Q9N2K0 584 aa10.07□□□□□ -0.8
HMGCS1-205ENST00000508319 ISYNA1Q9NPH2 558 aa10.07□□□□□ -0.8
HMGCS1-205ENST00000508319 MGAT4AQ9UM21 535 aa10.07□□□□□ -0.8
HMGCS1-205ENST00000508319 GAB2Q9UQC2 676 aa10.07□□□□□ -0.8
HMGCS1-205ENST00000508319 ZNF256Q9Y2P7 627 aaPredicted RBP10.07□□□□□ -0.8
HMGCS1-205ENST00000508319 A3GALT2U3KPV4 340 aa10.07□□□□□ -0.8
HMGCS1-205ENST00000508319 H7C2Y5 167 aa10.06□□□□□ -0.8
HMGCS1-205ENST00000508319 LDLRAD4O15165 306 aa10.06□□□□□ -0.8
HMGCS1-205ENST00000508319 HSPA12AO43301 675 aa10.06□□□□□ -0.8
HMGCS1-205ENST00000508319 IGKV1-16P04430 117 aa10.06□□□□□ -0.8
HMGCS1-205ENST00000508319 GSTP1P09211 210 aaKnown RBP10.06□□□□□ -0.8
HMGCS1-205ENST00000508319 NHLRC4P0CG21 123 aaPredicted RBP10.06□□□□□ -0.8
HMGCS1-205ENST00000508319 CRHBPP24387 322 aa10.06□□□□□ -0.8
HMGCS1-205ENST00000508319 PSMA1P25786 263 aaKnown RBP10.06□□□□□ -0.8
HMGCS1-205ENST00000508319 CALRP27797 417 aaKnown RBP10.06□□□□□ -0.8
HMGCS1-205ENST00000508319 MC5RP33032 325 aa10.06□□□□□ -0.8
HMGCS1-205ENST00000508319 VEGFCP49767 419 aa10.06□□□□□ -0.8
HMGCS1-205ENST00000508319 INSL3P51460 131 aa10.06□□□□□ -0.8
HMGCS1-205ENST00000508319 FABP5Q01469 135 aa10.06□□□□□ -0.8
HMGCS1-205ENST00000508319 PLA2G7Q13093 441 aa10.06□□□□□ -0.8
HMGCS1-205ENST00000508319 PLGLAQ15195 96 aa10.06□□□□□ -0.8
HMGCS1-205ENST00000508319 PSG5Q15238 335 aa10.06□□□□□ -0.8
HMGCS1-205ENST00000508319 CD200R1LQ6Q8B3 271 aa10.06□□□□□ -0.8
HMGCS1-205ENST00000508319 PRSS48Q7RTY5 328 aa10.06□□□□□ -0.8
HMGCS1-205ENST00000508319 DCUN1D4Q92564 292 aa10.06□□□□□ -0.8
HMGCS1-205ENST00000508319 FAM3DQ96BQ1 224 aa10.06□□□□□ -0.8
HMGCS1-205ENST00000508319 RNF5Q99942 180 aa10.06□□□□□ -0.8
HMGCS1-205ENST00000508319 FAM103A1Q9BTL3 118 aaKnown RBP10.06□□□□□ -0.8
HMGCS1-205ENST00000508319 PECRQ9BY49 303 aa10.06□□□□□ -0.8
HMGCS1-205ENST00000508319 NUBP2Q9Y5Y2 271 aa10.06□□□□□ -0.8
HMGCS1-205ENST00000508319 DNAH7Q8WXX0 4024 aa10.06□□□□□ -0.8
HMGCS1-205ENST00000508319 OVOL1O14753 267 aa10.05□□□□□ -0.8
HMGCS1-205ENST00000508319 SPDEFO95238 335 aa10.05□□□□□ -0.8
HMGCS1-205ENST00000508319 LGALS1P09382 135 aaKnown RBP10.05□□□□□ -0.8
HMGCS1-205ENST00000508319 MAP2K4P45985 399 aa10.05□□□□□ -0.8
HMGCS1-205ENST00000508319 SLURP1P55000 103 aa10.05□□□□□ -0.8
HMGCS1-205ENST00000508319 LINC00205P59089 165 aa10.05□□□□□ -0.8
HMGCS1-205ENST00000508319 ACTBL2Q562R1 376 aa10.05□□□□□ -0.8
HMGCS1-205ENST00000508319 ZNF383Q8NA42 475 aa10.05□□□□□ -0.8
HMGCS1-205ENST00000508319 OR56B1Q8NGI3 324 aa10.05□□□□□ -0.8
HMGCS1-205ENST00000508319 ABHD5Q8WTS1 349 aa10.05□□□□□ -0.8
HMGCS1-205ENST00000508319 DLX4Q92988 240 aaPredicted RBP10.05□□□□□ -0.8
HMGCS1-205ENST00000508319 MGLLQ99685 303 aa10.05□□□□□ -0.8
HMGCS1-205ENST00000508319 CMSS1Q9BQ75 279 aaKnown RBP10.05□□□□□ -0.8
HMGCS1-205ENST00000508319 TPSG1Q9NRR2 321 aa10.05□□□□□ -0.8
HMGCS1-205ENST00000508319 RDH8Q9NYR8 311 aa10.05□□□□□ -0.8
HMGCS1-205ENST00000508319 METTL1Q9UBP6 276 aaKnown RBP10.05□□□□□ -0.8
HMGCS1-205ENST00000508319 RNF150Q9ULK6 438 aa10.05□□□□□ -0.8
HMGCS1-205ENST00000508319 U3KQK5 164 aa10.05□□□□□ -0.8
HMGCS1-205ENST00000508319 IGHV4OR15-8A0A075B7B6 117 aa10.04□□□□□ -0.8
HMGCS1-205ENST00000508319 A0A087WW49 117 aa10.04□□□□□ -0.8
HMGCS1-205ENST00000508319 TMEM272A0A1B0GTI8 110 aa10.04□□□□□ -0.8
HMGCS1-205ENST00000508319 LINC01619G3V211 115 aa10.04□□□□□ -0.8
HMGCS1-205ENST00000508319 DENRO43583 198 aaKnown RBP10.04□□□□□ -0.8
HMGCS1-205ENST00000508319 CA2P00918 260 aa10.04□□□□□ -0.8
HMGCS1-205ENST00000508319 SSBP2P81877 361 aaPredicted RBP10.04□□□□□ -0.8
HMGCS1-205ENST00000508319 TBCEQ15813 527 aaPredicted RBP10.04□□□□□ -0.8
HMGCS1-205ENST00000508319 C2orf76Q3KRA6 126 aa10.04□□□□□ -0.8
HMGCS1-205ENST00000508319 MOGAT2Q3SYC2 334 aa10.04□□□□□ -0.8
HMGCS1-205ENST00000508319 AKIRIN2Q53H80 203 aa10.04□□□□□ -0.8
HMGCS1-205ENST00000508319 HES5Q5TA89 166 aa10.04□□□□□ -0.8
HMGCS1-205ENST00000508319 PYHIN1Q6K0P9 492 aa10.04□□□□□ -0.8
HMGCS1-205ENST00000508319 ZNF562Q6V9R5 426 aa10.04□□□□□ -0.8
HMGCS1-205ENST00000508319 ZNF429Q86V71 674 aa10.04□□□□□ -0.8
HMGCS1-205ENST00000508319 PPP1R27Q86WC6 154 aa10.04□□□□□ -0.8
HMGCS1-205ENST00000508319 PDPNQ86YL7 162 aa10.04□□□□□ -0.8
HMGCS1-205ENST00000508319 LFNGQ8NES3 379 aa10.04□□□□□ -0.8
HMGCS1-205ENST00000508319 CLCC1Q96S66 551 aa10.04□□□□□ -0.8
HMGCS1-205ENST00000508319 CCDC90BQ9GZT6 254 aa10.04□□□□□ -0.8
HMGCS1-205ENST00000508319 ACOT13Q9NPJ3 140 aa10.04□□□□□ -0.8
HMGCS1-205ENST00000508319 KCNK7Q9Y2U2 307 aa10.04□□□□□ -0.8
HMGCS1-205ENST00000508319 V9GY05 133 aa10.04□□□□□ -0.8
HMGCS1-205ENST00000508319 SHISA3A0PJX4 238 aa10.03□□□□□ -0.8
HMGCS1-205ENST00000508319 TRDCB7Z8K6 153 aa10.03□□□□□ -0.8
HMGCS1-205ENST00000508319 SLC25A17O43808 307 aa10.03□□□□□ -0.8
HMGCS1-205ENST00000508319 SAP30O75446 220 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms