RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 HIPK2Q9H2X6 1198 aa13.69□□□□□ -0.22
CLDND1-217ENST00000508071 CEPT1Q9Y6K0 416 aa13.69□□□□□ -0.22
CLDND1-217ENST00000508071 SHISA3A0PJX4 238 aa13.68□□□□□ -0.22
CLDND1-217ENST00000508071 SPDEFO95238 335 aa13.68□□□□□ -0.22
CLDND1-217ENST00000508071 LALBAP00709 142 aa13.68□□□□□ -0.22
CLDND1-217ENST00000508071 CPEP16870 476 aa13.68□□□□□ -0.22
CLDND1-217ENST00000508071 SMN1Q16637 294 aaKnown RBP13.68□□□□□ -0.22
CLDND1-217ENST00000508071 TATDN3Q17R31 274 aa13.68□□□□□ -0.22
CLDND1-217ENST00000508071 ZFP41Q8N8Y5 198 aa13.68□□□□□ -0.22
CLDND1-217ENST00000508071 EXOSC1Q9Y3B2 195 aaKnown RBP13.68□□□□□ -0.22
CLDND1-217ENST00000508071 IRGMA1A4Y4 181 aa13.67□□□□□ -0.22
CLDND1-217ENST00000508071 CNIH1O95406 144 aa13.67□□□□□ -0.22
CLDND1-217ENST00000508071 CSN3P07498 182 aa13.67□□□□□ -0.22
CLDND1-217ENST00000508071 SNRPBP14678 240 aaKnown RBP13.67□□□□□ -0.22
CLDND1-217ENST00000508071 RPS16P62249 146 aaKnown RBP13.67□□□□□ -0.22
CLDND1-217ENST00000508071 NKAIN3Q8N8D7 197 aa13.67□□□□□ -0.22
CLDND1-217ENST00000508071 SETD6Q8TBK2 473 aa13.67□□□□□ -0.22
CLDND1-217ENST00000508071 PGLYRP3Q96LB9 341 aa13.67□□□□□ -0.22
CLDND1-217ENST00000508071 UQCC2Q9BRT2 126 aa13.67□□□□□ -0.22
CLDND1-217ENST00000508071 FAAP24Q9BTP7 215 aa13.67□□□□□ -0.22
CLDND1-217ENST00000508071 PARP12Q9H0J9 701 aaKnown RBP13.67□□□□□ -0.22
CLDND1-217ENST00000508071 CHMP1AQ9HD42 196 aaPredicted RBP13.67□□□□□ -0.22
CLDND1-217ENST00000508071 SIGLEC8Q9NYZ4 499 aa13.67□□□□□ -0.22
CLDND1-217ENST00000508071 GHRLQ9UBU3 117 aa13.67□□□□□ -0.22
CLDND1-217ENST00000508071 PEF1Q9UBV8 284 aaKnown RBP13.67□□□□□ -0.22
CLDND1-217ENST00000508071 H3BNX3 289 aa13.66□□□□□ -0.22
CLDND1-217ENST00000508071 ITGB1BP1O14713 200 aa13.66□□□□□ -0.22
CLDND1-217ENST00000508071 WBP4O75554 376 aaKnown RBP13.66□□□□□ -0.22
CLDND1-217ENST00000508071 AADACP22760 399 aa13.66□□□□□ -0.22
CLDND1-217ENST00000508071 SVOPQ8N4V2 548 aa13.66□□□□□ -0.22
CLDND1-217ENST00000508071 DRAXINQ8NBI3 349 aaPredicted RBP13.66□□□□□ -0.22
CLDND1-217ENST00000508071 SLC29A1Q99808 456 aa13.66□□□□□ -0.22
CLDND1-217ENST00000508071 C9orf16Q9BUW7 83 aa13.66□□□□□ -0.22
CLDND1-217ENST00000508071 PLEKHA3Q9HB20 300 aa13.66□□□□□ -0.22
CLDND1-217ENST00000508071 CLEC2DQ9UHP7 191 aa13.66□□□□□ -0.22
CLDND1-217ENST00000508071 DIMT1Q9UNQ2 313 aaKnown RBP13.66□□□□□ -0.22
CLDND1-217ENST00000508071 IZUMO1RA6ND01 250 aa13.65□□□□□ -0.22
CLDND1-217ENST00000508071 SLC25A17O43808 307 aa13.65□□□□□ -0.22
CLDND1-217ENST00000508071 IGKV1-16P04430 117 aa13.65□□□□□ -0.22
CLDND1-217ENST00000508071 CD81P60033 236 aa13.65□□□□□ -0.22
CLDND1-217ENST00000508071 MED21Q13503 144 aa13.65□□□□□ -0.22
CLDND1-217ENST00000508071 RPEL1Q2QD12 228 aa13.65□□□□□ -0.22
CLDND1-217ENST00000508071 ZFP1Q6P2D0 407 aa13.65□□□□□ -0.22
CLDND1-217ENST00000508071 C6orf201Q7Z4U5 140 aa13.65□□□□□ -0.22
CLDND1-217ENST00000508071 EDARADDQ8WWZ3 215 aa13.65□□□□□ -0.22
CLDND1-217ENST00000508071 DERL3Q96Q80 235 aa13.65□□□□□ -0.22
CLDND1-217ENST00000508071 AGMATQ9BSE5 352 aa13.65□□□□□ -0.22
CLDND1-217ENST00000508071 KRTAP17-1Q9BYP8 105 aa13.65□□□□□ -0.22
CLDND1-217ENST00000508071 ADAM30Q9UKF2 790 aa13.65□□□□□ -0.22
CLDND1-217ENST00000508071 TPPPO94811 219 aa13.64□□□□□ -0.23
CLDND1-217ENST00000508071 NAPSAO96009 420 aa13.64□□□□□ -0.23
CLDND1-217ENST00000508071 APOA2P02652 100 aa13.64□□□□□ -0.23
CLDND1-217ENST00000508071 UBBP0CG47 229 aa13.64□□□□□ -0.23
CLDND1-217ENST00000508071 CEACAM6P40199 344 aa13.64□□□□□ -0.23
CLDND1-217ENST00000508071 RNLSQ5VYX0 342 aa13.64□□□□□ -0.23
CLDND1-217ENST00000508071 LINC00322Q6ZN03 302 aaPredicted RBP13.64□□□□□ -0.23
CLDND1-217ENST00000508071 MOB1BQ7L9L4 216 aa13.64□□□□□ -0.23
CLDND1-217ENST00000508071 PDPNQ86YL7 162 aa13.64□□□□□ -0.23
CLDND1-217ENST00000508071 BVESQ8NE79 360 aa13.64□□□□□ -0.23
CLDND1-217ENST00000508071 OR2K2Q8NGT1 345 aa13.64□□□□□ -0.23
CLDND1-217ENST00000508071 TMEM68Q96MH6 324 aa13.64□□□□□ -0.23
CLDND1-217ENST00000508071 TINAGL1Q9GZM7 467 aaPredicted RBP13.64□□□□□ -0.23
CLDND1-217ENST00000508071 C11orf54Q9H0W9 315 aaPredicted RBP13.64□□□□□ -0.23
CLDND1-217ENST00000508071 PEMTQ9UBM1 199 aa13.64□□□□□ -0.23
CLDND1-217ENST00000508071 PNMA8CA0A1B0GUJ8 204 aa13.63□□□□□ -0.23
CLDND1-217ENST00000508071 DYNC1I1O14576 645 aa13.63□□□□□ -0.23
CLDND1-217ENST00000508071 OR2A4O95047 310 aa13.63□□□□□ -0.23
CLDND1-217ENST00000508071 ZBTB25P24278 435 aa13.63□□□□□ -0.23
CLDND1-217ENST00000508071 LGALS7P47929 136 aa13.63□□□□□ -0.23
CLDND1-217ENST00000508071 DEFA5Q01523 94 aa13.63□□□□□ -0.23
CLDND1-217ENST00000508071 ZNF343Q6P1L6 599 aa13.63□□□□□ -0.23
CLDND1-217ENST00000508071 ZNF880Q6PDB4 577 aa13.63□□□□□ -0.23
CLDND1-217ENST00000508071 ZNF383Q8NA42 475 aa13.63□□□□□ -0.23
CLDND1-217ENST00000508071 USMG5Q96IX5 58 aa13.63□□□□□ -0.23
CLDND1-217ENST00000508071 NEURL2Q9BR09 285 aa13.63□□□□□ -0.23
CLDND1-217ENST00000508071 TMEM59Q9BXS4 323 aa13.63□□□□□ -0.23
CLDND1-217ENST00000508071 ZNF221Q9UK13 617 aa13.63□□□□□ -0.23
CLDND1-217ENST00000508071 BRI3O95415 125 aa13.62□□□□□ -0.23
CLDND1-217ENST00000508071 TRBV12-3P01733 135 aa13.62□□□□□ -0.23
CLDND1-217ENST00000508071 TAS2R43P59537 309 aa13.62□□□□□ -0.23
CLDND1-217ENST00000508071 RPS27AP62979 156 aaKnown RBP13.62□□□□□ -0.23
CLDND1-217ENST00000508071 OR10K2Q6IF99 312 aa13.62□□□□□ -0.23
CLDND1-217ENST00000508071 LAX1Q8IWV1 398 aa13.62□□□□□ -0.23
CLDND1-217ENST00000508071 ZNF555Q8NEP9 628 aa13.62□□□□□ -0.23
CLDND1-217ENST00000508071 TMEM80Q96HE8 168 aa13.62□□□□□ -0.23
CLDND1-217ENST00000508071 SLC2A8Q9NY64 477 aa13.62□□□□□ -0.23
CLDND1-217ENST00000508071 COA4Q9NYJ1 87 aa13.62□□□□□ -0.23
CLDND1-217ENST00000508071 OR1A1Q9P1Q5 309 aa13.62□□□□□ -0.23
CLDND1-217ENST00000508071 FRAS1Q86XX4 4008 aa13.61□□□□□ -0.23
CLDND1-217ENST00000508071 A0A0B4J203 849 aa13.61□□□□□ -0.23
CLDND1-217ENST00000508071 AIREO43918 545 aa13.61□□□□□ -0.23
CLDND1-217ENST00000508071 MAPK3P27361 379 aaPredicted RBP13.61□□□□□ -0.23
CLDND1-217ENST00000508071 HTR2CP28335 458 aa13.61□□□□□ -0.23
CLDND1-217ENST00000508071 MECP2P51608 486 aaKnown RBP13.61□□□□□ -0.23
CLDND1-217ENST00000508071 LINC00205P59089 165 aa13.61□□□□□ -0.23
CLDND1-217ENST00000508071 SSBP2P81877 361 aaPredicted RBP13.61□□□□□ -0.23
CLDND1-217ENST00000508071 DYRK1AQ13627 763 aa13.61□□□□□ -0.23
CLDND1-217ENST00000508071 DEFB125Q8N687 156 aa13.61□□□□□ -0.23
CLDND1-217ENST00000508071 THRSPQ92748 146 aa13.61□□□□□ -0.23
CLDND1-217ENST00000508071 SNAPC3Q92966 411 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms