RNA–Protein interactions for RNA: ENST00000507906.5

USP53-204, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 4

Gene USP53, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-204ENST00000507906 DENRO43583 198 aaKnown RBP1.99□□□□□ -2.09
USP53-204ENST00000507906 STK16O75716 305 aa1.99□□□□□ -2.09
USP53-204ENST00000507906 CRTAPO75718 401 aaPredicted RBP1.99□□□□□ -2.09
USP53-204ENST00000507906 SOD1P00441 154 aa1.99□□□□□ -2.09
USP53-204ENST00000507906 APOEP02649 317 aa1.99□□□□□ -2.09
USP53-204ENST00000507906 NQO1P15559 274 aaKnown RBP1.99□□□□□ -2.09
USP53-204ENST00000507906 CCL1P22362 96 aa1.99□□□□□ -2.09
USP53-204ENST00000507906 CRYBB3P26998 211 aa1.99□□□□□ -2.09
USP53-204ENST00000507906 CRABP1P29762 137 aa1.99□□□□□ -2.09
USP53-204ENST00000507906 SNAP25P60880 206 aa1.99□□□□□ -2.09
USP53-204ENST00000507906 MAGOHP61326 146 aaKnown RBP1.99□□□□□ -2.09
USP53-204ENST00000507906 IMPG1Q17R60 797 aa1.99□□□□□ -2.09
USP53-204ENST00000507906 LRRC75BQ2VPJ9 315 aa1.99□□□□□ -2.09
USP53-204ENST00000507906 PYCR3Q53H96 274 aa1.99□□□□□ -2.09
USP53-204ENST00000507906 OGFRL1Q5TC84 451 aaPredicted RBP1.99□□□□□ -2.09
USP53-204ENST00000507906 C8orf74Q6P047 294 aa1.99□□□□□ -2.09
USP53-204ENST00000507906 SFXN4Q6P4A7 337 aa1.99□□□□□ -2.09
USP53-204ENST00000507906 TNFAIP8L2Q6P589 184 aaPredicted RBP1.99□□□□□ -2.09
USP53-204ENST00000507906 KRTAP5-5Q701N2 237 aaPredicted RBP1.99□□□□□ -2.09
USP53-204ENST00000507906 BAP18Q8IXM2 172 aa1.99□□□□□ -2.09
USP53-204ENST00000507906 TVP23CQ96ET8 276 aa1.99□□□□□ -2.09
USP53-204ENST00000507906 OR8B2Q96RD0 313 aa1.99□□□□□ -2.09
USP53-204ENST00000507906 TBX5Q99593 518 aa1.99□□□□□ -2.09
USP53-204ENST00000507906 ABCG5Q9H222 651 aa1.99□□□□□ -2.09
USP53-204ENST00000507906 POLR1DQ9Y2S0 133 aa1.99□□□□□ -2.09
USP53-204ENST00000507906 C9orf84Q5VXU9 1444 aa1.99□□□□□ -2.09
USP53-204ENST00000507906 ZSWIM8A7E2V4 1837 aa1.98□□□□□ -2.09
USP53-204ENST00000507906 NACADO15069 1562 aa1.98□□□□□ -2.09
USP53-204ENST00000507906 IGLV10-54A0A075B6I4 117 aa1.98□□□□□ -2.09
USP53-204ENST00000507906 TRAV8-1A0A0A6YYK1 113 aa1.98□□□□□ -2.09
USP53-204ENST00000507906 KCNK1O00180 336 aa1.98□□□□□ -2.09
USP53-204ENST00000507906 ISG15P05161 165 aa1.98□□□□□ -2.09
USP53-204ENST00000507906 CALB1P05937 261 aa1.98□□□□□ -2.09
USP53-204ENST00000507906 SERPINA6P08185 405 aa1.98□□□□□ -2.09
USP53-204ENST00000507906 IL3P08700 152 aa1.98□□□□□ -2.09
USP53-204ENST00000507906 IGHV3-30-3P0DP02 117 aa1.98□□□□□ -2.09
USP53-204ENST00000507906 ESDP10768 282 aa1.98□□□□□ -2.09
USP53-204ENST00000507906 AP2S1P53680 142 aaPredicted RBP1.98□□□□□ -2.09
USP53-204ENST00000507906 TCL1AP56279 114 aa1.98□□□□□ -2.09
USP53-204ENST00000507906 FOXF1Q12946 379 aa1.98□□□□□ -2.09
USP53-204ENST00000507906 HTR4Q13639 388 aa1.98□□□□□ -2.09
USP53-204ENST00000507906 ACSM3Q53FZ2 586 aa1.98□□□□□ -2.09
USP53-204ENST00000507906 SPIN3Q5JUX0 258 aa1.98□□□□□ -2.09
USP53-204ENST00000507906 C1orf194Q5T5A4 169 aa1.98□□□□□ -2.09
USP53-204ENST00000507906 LY6G5BQ8NDX9 201 aa1.98□□□□□ -2.09
USP53-204ENST00000507906 OR1M1Q8NGA1 313 aa1.98□□□□□ -2.09
USP53-204ENST00000507906 OR10P1Q8NGE3 313 aa1.98□□□□□ -2.09
USP53-204ENST00000507906 PKMYT1Q99640 499 aa1.98□□□□□ -2.09
USP53-204ENST00000507906 EIF5A2Q9GZV4 153 aaKnown RBP1.98□□□□□ -2.09
USP53-204ENST00000507906 C3orf18Q9UK00 162 aa1.98□□□□□ -2.09
USP53-204ENST00000507906 COQ4Q9Y3A0 265 aa1.98□□□□□ -2.09
USP53-204ENST00000507906 SNAPC4Q5SXM2 1469 aa1.97□□□□□ -2.09
USP53-204ENST00000507906 ZCCHC6Q5VYS8 1495 aaKnown RBP1.97□□□□□ -2.09
USP53-204ENST00000507906 TGIF2-C20orf24A0A0A6YYL0 155 aa1.97□□□□□ -2.09
USP53-204ENST00000507906 C5orf49A4QMS7 147 aa1.97□□□□□ -2.09
USP53-204ENST00000507906 VPS37CA5D8V6 355 aaPredicted RBP1.97□□□□□ -2.09
USP53-204ENST00000507906 ACOX3O15254 700 aa1.97□□□□□ -2.09
USP53-204ENST00000507906 SYNGR2O43760 224 aa1.97□□□□□ -2.09
USP53-204ENST00000507906 IGLV6-57P01721 117 aa1.97□□□□□ -2.09
USP53-204ENST00000507906 RPS17P08708 135 aaKnown RBP1.97□□□□□ -2.09
USP53-204ENST00000507906 CCR7P32248 378 aa1.97□□□□□ -2.09
USP53-204ENST00000507906 ANP32AP39687 249 aaKnown RBP1.97□□□□□ -2.09
USP53-204ENST00000507906 MAP2K4P45985 399 aa1.97□□□□□ -2.09
USP53-204ENST00000507906 TMEM33P57088 247 aa1.97□□□□□ -2.09
USP53-204ENST00000507906 TSPEAR-AS2P59090 65 aa1.97□□□□□ -2.09
USP53-204ENST00000507906 NAA20P61599 178 aa1.97□□□□□ -2.09
USP53-204ENST00000507906 EBPQ15125 230 aaKnown RBP1.97□□□□□ -2.09
USP53-204ENST00000507906 CLVS2Q5SYC1 327 aa1.97□□□□□ -2.09
USP53-204ENST00000507906 ALKAL1Q6UXT8 129 aa1.97□□□□□ -2.09
USP53-204ENST00000507906 GID4Q8IVV7 300 aa1.97□□□□□ -2.09
USP53-204ENST00000507906 LRRC34Q8IZ02 419 aa1.97□□□□□ -2.09
USP53-204ENST00000507906 LYPD1Q8N2G4 141 aa1.97□□□□□ -2.09
USP53-204ENST00000507906 UBL4BQ8N7F7 174 aa1.97□□□□□ -2.09
USP53-204ENST00000507906 OR11H1Q8NG94 326 aa1.97□□□□□ -2.09
USP53-204ENST00000507906 OR8K1Q8NGG5 319 aa1.97□□□□□ -2.09
USP53-204ENST00000507906 ASB17Q8WXJ9 295 aa1.97□□□□□ -2.09
USP53-204ENST00000507906 ITFG2Q969R8 447 aa1.97□□□□□ -2.09
USP53-204ENST00000507906 ANKRD36BP1Q96IX9 119 aa1.97□□□□□ -2.09
USP53-204ENST00000507906 TM2D3Q9BRN9 247 aa1.97□□□□□ -2.09
USP53-204ENST00000507906 TAS2R9Q9NYW1 312 aa1.97□□□□□ -2.09
USP53-204ENST00000507906 EMC3Q9P0I2 261 aa1.97□□□□□ -2.09
USP53-204ENST00000507906 VPREB3Q9UKI3 123 aa1.97□□□□□ -2.09
USP53-204ENST00000507906 FIS1Q9Y3D6 152 aa1.97□□□□□ -2.09
USP53-204ENST00000507906 ZFYVE9O95405 1425 aa1.97□□□□□ -2.09
USP53-204ENST00000507906 PTPRJQ12913 1337 aa1.96□□□□□ -2.1
USP53-204ENST00000507906 LTBP4Q8N2S1 1624 aa1.96□□□□□ -2.1
USP53-204ENST00000507906 IGKV2-24A0A0C4DH68 120 aa1.96□□□□□ -2.1
USP53-204ENST00000507906 MDFIC2A0A1B0GVS7 189 aa1.96□□□□□ -2.1
USP53-204ENST00000507906 GSTZ1O43708 216 aaPredicted RBP1.96□□□□□ -2.1
USP53-204ENST00000507906 LY6HO94772 140 aa1.96□□□□□ -2.1
USP53-204ENST00000507906 CD7P09564 240 aa1.96□□□□□ -2.1
USP53-204ENST00000507906 CCL3P10147 92 aa1.96□□□□□ -2.1
USP53-204ENST00000507906 CA7P43166 264 aa1.96□□□□□ -2.1
USP53-204ENST00000507906 SERPINB10P48595 397 aa1.96□□□□□ -2.1
USP53-204ENST00000507906 PRDX4Q13162 271 aa1.96□□□□□ -2.1
USP53-204ENST00000507906 CST6Q15828 149 aa1.96□□□□□ -2.1
USP53-204ENST00000507906 N4BP2L1Q5TBK1 243 aaPredicted RBP1.96□□□□□ -2.1
USP53-204ENST00000507906 SYPL2Q5VXT5 272 aa1.96□□□□□ -2.1
USP53-204ENST00000507906 SBSNQ6UWP8 590 aa1.96□□□□□ -2.1
USP53-204ENST00000507906 TMEM86BQ8N661 226 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms