RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 ZNF833PQ6ZTB9 187 aa5.2□□□□□ -1.58
VCAN-207ENST00000507162 UTS2BQ765I0 119 aa5.2□□□□□ -1.58
VCAN-207ENST00000507162 C5orf24Q7Z6I8 188 aa5.2□□□□□ -1.58
VCAN-207ENST00000507162 GPHB5Q86YW7 130 aa5.2□□□□□ -1.58
VCAN-207ENST00000507162 STX19Q8N4C7 294 aa5.2□□□□□ -1.58
VCAN-207ENST00000507162 Q8NAQ8 132 aa5.2□□□□□ -1.58
VCAN-207ENST00000507162 SETD9Q8NE22 299 aa5.2□□□□□ -1.58
VCAN-207ENST00000507162 CCDC54Q8NEL0 328 aa5.2□□□□□ -1.58
VCAN-207ENST00000507162 OR13C9Q8NGT0 318 aa5.2□□□□□ -1.58
VCAN-207ENST00000507162 OR10AC1Q8NH08 325 aa5.2□□□□□ -1.58
VCAN-207ENST00000507162 OR4K15Q8NH41 348 aa5.2□□□□□ -1.58
VCAN-207ENST00000507162 ASB9Q96DX5 294 aa5.2□□□□□ -1.58
VCAN-207ENST00000507162 TSNAXQ99598 290 aaKnown RBP5.2□□□□□ -1.58
VCAN-207ENST00000507162 SPAG8Q99932 426 aaPredicted RBP5.2□□□□□ -1.58
VCAN-207ENST00000507162 ALG8Q9BVK2 526 aa5.2□□□□□ -1.58
VCAN-207ENST00000507162 KRTAP4-9Q9BYQ8 210 aa5.2□□□□□ -1.58
VCAN-207ENST00000507162 EXOSC1Q9Y3B2 195 aaKnown RBP5.2□□□□□ -1.58
VCAN-207ENST00000507162 ELOA3CA0A087WX78 387 aaPredicted RBP5.19□□□□□ -1.58
VCAN-207ENST00000507162 FAM223BA6NKX1 122 aa5.19□□□□□ -1.58
VCAN-207ENST00000507162 ZNF670-ZNF695F2Z2N8 137 aa5.19□□□□□ -1.58
VCAN-207ENST00000507162 MPPED1O15442 326 aa5.19□□□□□ -1.58
VCAN-207ENST00000507162 SULT1B1O43704 296 aa5.19□□□□□ -1.58
VCAN-207ENST00000507162 RBBP9O75884 186 aa5.19□□□□□ -1.58
VCAN-207ENST00000507162 OR2J3O76001 311 aa5.19□□□□□ -1.58
VCAN-207ENST00000507162 HMGN1P05114 100 aa5.19□□□□□ -1.58
VCAN-207ENST00000507162 KRT8P05787 483 aa5.19□□□□□ -1.58
VCAN-207ENST00000507162 SLC2A5P22732 501 aa5.19□□□□□ -1.58
VCAN-207ENST00000507162 NPY1RP25929 384 aa5.19□□□□□ -1.58
VCAN-207ENST00000507162 ARL3P36405 182 aa5.19□□□□□ -1.58
VCAN-207ENST00000507162 ALKBH1Q13686 389 aaKnown RBP5.19□□□□□ -1.58
VCAN-207ENST00000507162 RSU1Q15404 277 aa5.19□□□□□ -1.58
VCAN-207ENST00000507162 RNF212Q495C1 297 aa5.19□□□□□ -1.58
VCAN-207ENST00000507162 RPL39P5Q59GN2 51 aa5.19□□□□□ -1.58
VCAN-207ENST00000507162 OR4A47Q6IF82 309 aa5.19□□□□□ -1.58
VCAN-207ENST00000507162 FAM223AQ8IWN6 122 aa5.19□□□□□ -1.58
VCAN-207ENST00000507162 SLC35F2Q8IXU6 374 aa5.19□□□□□ -1.58
VCAN-207ENST00000507162 C17orf77Q96MU5 243 aa5.19□□□□□ -1.58
VCAN-207ENST00000507162 TBX5Q99593 518 aa5.19□□□□□ -1.58
VCAN-207ENST00000507162 RNF5Q99942 180 aa5.19□□□□□ -1.58
VCAN-207ENST00000507162 WASHC3Q9Y3C0 194 aa5.19□□□□□ -1.58
VCAN-207ENST00000507162 DMRT1Q9Y5R6 373 aa5.19□□□□□ -1.58
VCAN-207ENST00000507162 S4R3C0 116 aa5.19□□□□□ -1.58
VCAN-207ENST00000507162 CCDC182A6NF36 153 aa5.18□□□□□ -1.58
VCAN-207ENST00000507162 F8W735 103 aaPredicted RBP5.18□□□□□ -1.58
VCAN-207ENST00000507162 H0YJW9 148 aa5.18□□□□□ -1.58
VCAN-207ENST00000507162 SEMG1P04279 462 aa5.18□□□□□ -1.58
VCAN-207ENST00000507162 OR9G9P0C7N8 305 aa5.18□□□□□ -1.58
VCAN-207ENST00000507162 RCC1P18754 421 aaPredicted RBP5.18□□□□□ -1.58
VCAN-207ENST00000507162 EPHA2P29317 976 aa5.18□□□□□ -1.58
VCAN-207ENST00000507162 KISS1Q15726 138 aa5.18□□□□□ -1.58
VCAN-207ENST00000507162 C15orf32Q32M92 178 aa5.18□□□□□ -1.58
VCAN-207ENST00000507162 C4orf46Q504U0 113 aa5.18□□□□□ -1.58
VCAN-207ENST00000507162 C6orf183Q5T699 404 aa5.18□□□□□ -1.58
VCAN-207ENST00000507162 ZNF691Q5VV52 312 aa5.18□□□□□ -1.58
VCAN-207ENST00000507162 LPCAT4Q643R3 524 aa5.18□□□□□ -1.58
VCAN-207ENST00000507162 ELP2Q6IA86 826 aa5.18□□□□□ -1.58
VCAN-207ENST00000507162 LAMTOR1Q6IAA8 161 aa5.18□□□□□ -1.58
VCAN-207ENST00000507162 CLEC19AQ6UXS0 136 aa5.18□□□□□ -1.58
VCAN-207ENST00000507162 ZNF497Q6ZNH5 498 aa5.18□□□□□ -1.58
VCAN-207ENST00000507162 DRAXINQ8NBI3 349 aaPredicted RBP5.18□□□□□ -1.58
VCAN-207ENST00000507162 CNN2Q99439 309 aaKnown RBP5.18□□□□□ -1.58
VCAN-207ENST00000507162 GPER1Q99527 375 aa5.18□□□□□ -1.58
VCAN-207ENST00000507162 NIPSNAP1Q9BPW8 284 aa5.18□□□□□ -1.58
VCAN-207ENST00000507162 NICN1Q9BSH3 213 aa5.18□□□□□ -1.58
VCAN-207ENST00000507162 KRTAP4-2Q9BYR5 136 aa5.18□□□□□ -1.58
VCAN-207ENST00000507162 FAM192AQ9GZU8 254 aa5.18□□□□□ -1.58
VCAN-207ENST00000507162 RNF167Q9H6Y7 350 aa5.18□□□□□ -1.58
VCAN-207ENST00000507162 TAF9BQ9HBM6 251 aa5.18□□□□□ -1.58
VCAN-207ENST00000507162 PTTG2Q9NZH5 202 aa5.18□□□□□ -1.58
VCAN-207ENST00000507162 CELA1Q9UNI1 258 aa5.18□□□□□ -1.58
VCAN-207ENST00000507162 ST3GAL6Q9Y274 331 aa5.18□□□□□ -1.58
VCAN-207ENST00000507162 IGHV3-35A0A0C4DH35 117 aa5.17□□□□□ -1.58
VCAN-207ENST00000507162 NBDYA0A0U1RRE5 68 aa5.17□□□□□ -1.58
VCAN-207ENST00000507162 OR4C46A6NHA9 309 aa5.17□□□□□ -1.58
VCAN-207ENST00000507162 OR5H14A6NHG9 310 aa5.17□□□□□ -1.58
VCAN-207ENST00000507162 METTL15A6NJ78 407 aa5.17□□□□□ -1.58
VCAN-207ENST00000507162 KRTAP29-1A8MX34 341 aaPredicted RBP5.17□□□□□ -1.58
VCAN-207ENST00000507162 TSPAN4O14817 238 aa5.17□□□□□ -1.58
VCAN-207ENST00000507162 GEMIN2O14893 280 aaKnown RBP5.17□□□□□ -1.58
VCAN-207ENST00000507162 RAB29O14966 203 aa5.17□□□□□ -1.58
VCAN-207ENST00000507162 MT-ND2P03891 347 aa5.17□□□□□ -1.58
VCAN-207ENST00000507162 FUSP35637 526 aaKnown RBP eCLIP5.17□□□□□ -1.58
VCAN-207ENST00000507162 TFPI2P48307 235 aa5.17□□□□□ -1.58
VCAN-207ENST00000507162 DLK1P80370 383 aa5.17□□□□□ -1.58
VCAN-207ENST00000507162 SSBP2P81877 361 aaPredicted RBP5.17□□□□□ -1.58
VCAN-207ENST00000507162 HTD2P86397 168 aa5.17□□□□□ -1.58
VCAN-207ENST00000507162 ANKRD39Q53RE8 183 aa5.17□□□□□ -1.58
VCAN-207ENST00000507162 TMEM244Q5VVB8 128 aa5.17□□□□□ -1.58
VCAN-207ENST00000507162 Q6ZSN1 163 aa5.17□□□□□ -1.58
VCAN-207ENST00000507162 SSX6Q7RTT6 188 aa5.17□□□□□ -1.58
VCAN-207ENST00000507162 CROCCP2Q86T23 111 aa5.17□□□□□ -1.58
VCAN-207ENST00000507162 PRSS35Q8N3Z0 413 aa5.17□□□□□ -1.58
VCAN-207ENST00000507162 OR2AK2Q8NG84 335 aa5.17□□□□□ -1.58
VCAN-207ENST00000507162 OR13C3Q8NGS6 347 aa5.17□□□□□ -1.58
VCAN-207ENST00000507162 TNFAIP8L1Q8WVP5 186 aa5.17□□□□□ -1.58
VCAN-207ENST00000507162 DYDC1Q8WWB3 177 aa5.17□□□□□ -1.58
VCAN-207ENST00000507162 MARC2Q969Z3 335 aa5.17□□□□□ -1.58
VCAN-207ENST00000507162 HOPXQ9BPY8 73 aaPredicted RBP5.17□□□□□ -1.58
VCAN-207ENST00000507162 C5orf66Q9H5L9 145 aa5.17□□□□□ -1.58
VCAN-207ENST00000507162 TVP23BQ9NYZ1 205 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms