RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 IGLV2-14P01704 120 aa7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 FBP1P09467 338 aa7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 CTXN2P0C2S0 81 aa7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 GPR12P47775 334 aa7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 LUMP51884 338 aaPredicted RBP7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 TAS2R46P59540 309 aa7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 TAS2R19P59542 299 aa7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 ACTBP60709 375 aa7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 ACTG1P63261 375 aa7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 ZNF45Q02386 682 aa7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 LSAMPQ13449 338 aa7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 OR2B11Q5JQS5 317 aa7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 MINOS1Q5TGZ0 78 aa7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 DHRS11Q6UWP2 260 aa7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 CCBE1Q6UXH8 406 aaPredicted RBP7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 Q6YL49 198 aa7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 ZDHHC22Q8N966 263 aa7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 OR6F1Q8NGZ6 308 aa7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 C15orf40Q8WUR7 153 aa7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 CAPSLQ8WWF8 208 aa7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 RTN4IP1Q8WWV3 396 aaPredicted RBP7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 MRGPRFQ96AM1 343 aa7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 SLC5A7Q9GZV3 580 aa7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 TOLLIPQ9H0E2 274 aa7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 FXYD6Q9H0Q3 95 aa7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 HRASLSQ9HDD0 168 aa7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 ABCB10Q9NRK6 738 aa7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 MCUBQ9NWR8 336 aa7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 ZNF221Q9UK13 617 aa7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 TBL2Q9Y4P3 447 aaKnown RBP7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 MINOS1-NBL1R4GNA1 71 aa7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 COL6A5A8TX70 2615 aa7.1□□□□□ -1.27
SCAMP1-202ENST00000506858 IGHV1-3A0A0C4DH29 117 aa7.09□□□□□ -1.27
SCAMP1-202ENST00000506858 DNAJC9-AS1A6NH13 148 aa7.09□□□□□ -1.27
SCAMP1-202ENST00000506858 SH2D7A6NKC9 451 aaPredicted RBP7.09□□□□□ -1.27
SCAMP1-202ENST00000506858 CD74P04233 296 aa7.09□□□□□ -1.27
SCAMP1-202ENST00000506858 IFNA6P05013 189 aa7.09□□□□□ -1.27
SCAMP1-202ENST00000506858 AKAIN1P0CW23 69 aa7.09□□□□□ -1.27
SCAMP1-202ENST00000506858 CT45A6P0DMU7 189 aa7.09□□□□□ -1.27
SCAMP1-202ENST00000506858 CT45A5P0DMU8 189 aa7.09□□□□□ -1.27
SCAMP1-202ENST00000506858 CT45A7P0DMV0 189 aa7.09□□□□□ -1.27
SCAMP1-202ENST00000506858 IL7P13232 177 aa7.09□□□□□ -1.27
SCAMP1-202ENST00000506858 PTBP1P26599 531 aaKnown RBP eCLIP7.09□□□□□ -1.272e-10■■■■■ 42.2
SCAMP1-202ENST00000506858 PPP5CP53041 499 aa7.09□□□□□ -1.27
SCAMP1-202ENST00000506858 HERV-K104P61576 105 aa7.09□□□□□ -1.27
SCAMP1-202ENST00000506858 RPL30P62888 115 aaKnown RBP7.09□□□□□ -1.27
SCAMP1-202ENST00000506858 IFITM3Q01628 133 aa7.09□□□□□ -1.27
SCAMP1-202ENST00000506858 SLC9A3R2Q15599 337 aa7.09□□□□□ -1.27
SCAMP1-202ENST00000506858 TMEM30BQ3MIR4 351 aa7.09□□□□□ -1.27
SCAMP1-202ENST00000506858 PHLDA2Q53GA4 152 aa7.09□□□□□ -1.27
SCAMP1-202ENST00000506858 AADACL3Q5VUY0 350 aa7.09□□□□□ -1.27
SCAMP1-202ENST00000506858 ZNF833PQ6ZTB9 187 aa7.09□□□□□ -1.27
SCAMP1-202ENST00000506858 TGIF2LXQ8IUE1 241 aa7.09□□□□□ -1.27
SCAMP1-202ENST00000506858 TOMM5Q8N4H5 51 aa7.09□□□□□ -1.27
SCAMP1-202ENST00000506858 GDPD1Q8N9F7 314 aa7.09□□□□□ -1.27
SCAMP1-202ENST00000506858 C8orf31Q8N9H6 132 aa7.09□□□□□ -1.27
SCAMP1-202ENST00000506858 OR51S1Q8NGJ8 323 aa7.09□□□□□ -1.27
SCAMP1-202ENST00000506858 GIMAP1Q8WWP7 306 aa7.09□□□□□ -1.27
SCAMP1-202ENST00000506858 NABP2Q9BQ15 211 aa7.09□□□□□ -1.27
SCAMP1-202ENST00000506858 CHIAQ9BZP6 476 aa7.09□□□□□ -1.27
SCAMP1-202ENST00000506858 MEGF9Q9H1U4 602 aa7.09□□□□□ -1.27
SCAMP1-202ENST00000506858 TAS2R8Q9NYW2 309 aa7.09□□□□□ -1.27
SCAMP1-202ENST00000506858 AMMECR1Q9Y4X0 333 aaPredicted RBP7.09□□□□□ -1.27
SCAMP1-202ENST00000506858 LINC00473A8K010 186 aa7.09□□□□□ -1.28
SCAMP1-202ENST00000506858 RAB29O14966 203 aa7.09□□□□□ -1.28
SCAMP1-202ENST00000506858 PLA2G10O15496 165 aa7.09□□□□□ -1.28
SCAMP1-202ENST00000506858 PEX14O75381 377 aa7.09□□□□□ -1.28
SCAMP1-202ENST00000506858 DIRAS3O95661 229 aa7.09□□□□□ -1.28
SCAMP1-202ENST00000506858 GAPDHP04406 335 aaKnown RBP7.09□□□□□ -1.28
SCAMP1-202ENST00000506858 SNRNP70P08621 437 aaKnown RBP7.09□□□□□ -1.28
SCAMP1-202ENST00000506858 CSF1P09603 554 aa7.09□□□□□ -1.28
SCAMP1-202ENST00000506858 CD33P20138 364 aa7.09□□□□□ -1.28
SCAMP1-202ENST00000506858 GNRHRP30968 328 aa7.09□□□□□ -1.28
SCAMP1-202ENST00000506858 CEACAM3P40198 252 aa7.09□□□□□ -1.28
SCAMP1-202ENST00000506858 IER3P46695 156 aa7.09□□□□□ -1.28
SCAMP1-202ENST00000506858 BPIFB3P59826 476 aa7.09□□□□□ -1.28
SCAMP1-202ENST00000506858 LRRC75BQ2VPJ9 315 aa7.09□□□□□ -1.28
SCAMP1-202ENST00000506858 LY6G6FQ5SQ64 297 aa7.09□□□□□ -1.28
SCAMP1-202ENST00000506858 VAX1Q5SQQ9 334 aa7.09□□□□□ -1.28
SCAMP1-202ENST00000506858 TRIQKQ629K1 86 aa7.09□□□□□ -1.28
SCAMP1-202ENST00000506858 RBMS3Q6XE24 437 aaKnown RBP7.09□□□□□ -1.28
SCAMP1-202ENST00000506858 ZNF818PQ6ZRF7 136 aa7.09□□□□□ -1.28
SCAMP1-202ENST00000506858 TEX29Q8N6K0 151 aa7.09□□□□□ -1.28
SCAMP1-202ENST00000506858 ZNF383Q8NA42 475 aa7.09□□□□□ -1.28
SCAMP1-202ENST00000506858 MARCH1Q8TCQ1 289 aa7.09□□□□□ -1.28
SCAMP1-202ENST00000506858 CFHR4Q92496 578 aa7.09□□□□□ -1.28
SCAMP1-202ENST00000506858 MOB3AQ96BX8 217 aa7.09□□□□□ -1.28
SCAMP1-202ENST00000506858 RABL2AQ9UBK7 228 aaPredicted RBP7.09□□□□□ -1.28
SCAMP1-202ENST00000506858 RABL2BQ9UNT1 228 aa7.09□□□□□ -1.28
SCAMP1-202ENST00000506858 ITGB1BP1O14713 200 aa7.08□□□□□ -1.28
SCAMP1-202ENST00000506858 CHST1O43916 411 aa7.08□□□□□ -1.28
SCAMP1-202ENST00000506858 IGKV1D-33P01593 117 aa7.08□□□□□ -1.28
SCAMP1-202ENST00000506858 IGKV1-33P01594 117 aa7.08□□□□□ -1.28
SCAMP1-202ENST00000506858 PGAM2P15259 253 aa7.08□□□□□ -1.28
SCAMP1-202ENST00000506858 IL3RAP26951 378 aa7.08□□□□□ -1.28
SCAMP1-202ENST00000506858 CNTFRP26992 372 aa7.08□□□□□ -1.28
SCAMP1-202ENST00000506858 CD40LGP29965 261 aa7.08□□□□□ -1.28
SCAMP1-202ENST00000506858 INPP1P49441 399 aa7.08□□□□□ -1.28
SCAMP1-202ENST00000506858 RAB7AP51149 207 aa7.08□□□□□ -1.28
SCAMP1-202ENST00000506858 CCR6P51684 374 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms