RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 TET2Q6N021 2002 aaPredicted RBP13.24□□□□□ -0.29
SNCA-209ENST00000506244 IGKV1D-8A0A087WSZ0 117 aa13.24□□□□□ -0.29
SNCA-209ENST00000506244 SMIM31A0A1B0GVY4 71 aa13.24□□□□□ -0.29
SNCA-209ENST00000506244 SH2D7A6NKC9 451 aaPredicted RBP13.24□□□□□ -0.29
SNCA-209ENST00000506244 H0YJW9 148 aa13.24□□□□□ -0.29
SNCA-209ENST00000506244 H7C2Y5 167 aa13.24□□□□□ -0.29
SNCA-209ENST00000506244 IGHG2P01859 326 aa13.24□□□□□ -0.29
SNCA-209ENST00000506244 CT45A6P0DMU7 189 aa13.24□□□□□ -0.29
SNCA-209ENST00000506244 CT45A5P0DMU8 189 aa13.24□□□□□ -0.29
SNCA-209ENST00000506244 CT45A7P0DMV0 189 aa13.24□□□□□ -0.29
SNCA-209ENST00000506244 SOX6P35712 828 aa13.24□□□□□ -0.29
SNCA-209ENST00000506244 CBX3Q13185 183 aa13.24□□□□□ -0.29
SNCA-209ENST00000506244 CENPVQ7Z7K6 275 aaPredicted RBP13.24□□□□□ -0.29
SNCA-209ENST00000506244 CLVS1Q8IUQ0 354 aaPredicted RBP13.24□□□□□ -0.29
SNCA-209ENST00000506244 FAM71E2Q8N5Q1 922 aa13.24□□□□□ -0.29
SNCA-209ENST00000506244 Q8N9W7 124 aa13.24□□□□□ -0.29
SNCA-209ENST00000506244 OR4X2Q8NGF9 303 aa13.24□□□□□ -0.29
SNCA-209ENST00000506244 OR5AN1Q8NGI8 311 aa13.24□□□□□ -0.29
SNCA-209ENST00000506244 WIPF2Q8TF74 440 aaPredicted RBP13.24□□□□□ -0.29
SNCA-209ENST00000506244 CHPT1Q8WUD6 406 aa13.24□□□□□ -0.29
SNCA-209ENST00000506244 IFT46Q9NQC8 304 aa13.24□□□□□ -0.29
SNCA-209ENST00000506244 SCOCQ9UIL1 159 aa13.24□□□□□ -0.29
SNCA-209ENST00000506244 GAB2Q9UQC2 676 aa13.24□□□□□ -0.29
SNCA-209ENST00000506244 M0R1X1 148 aa13.23□□□□□ -0.29
SNCA-209ENST00000506244 NBR2O15453 112 aa13.23□□□□□ -0.29
SNCA-209ENST00000506244 SLC22A5O76082 557 aa13.23□□□□□ -0.29
SNCA-209ENST00000506244 ZNF182P17025 639 aaPredicted RBP13.23□□□□□ -0.29
SNCA-209ENST00000506244 TMBIM6P55061 237 aa13.23□□□□□ -0.29
SNCA-209ENST00000506244 TAS2R20P59543 309 aa13.23□□□□□ -0.29
SNCA-209ENST00000506244 TAGLNQ01995 201 aaKnown RBP13.23□□□□□ -0.29
SNCA-209ENST00000506244 HOGA1Q86XE5 327 aa13.23□□□□□ -0.29
SNCA-209ENST00000506244 GON7Q9BXV9 100 aa13.23□□□□□ -0.29
SNCA-209ENST00000506244 PLSCR3Q9NRY6 295 aa13.23□□□□□ -0.29
SNCA-209ENST00000506244 PSMB11A5LHX3 300 aa13.22□□□□□ -0.29
SNCA-209ENST00000506244 AP4M1O00189 453 aa13.22□□□□□ -0.29
SNCA-209ENST00000506244 OPN1MWP04001 364 aa13.22□□□□□ -0.29
SNCA-209ENST00000506244 EIF4EP06730 217 aaKnown RBP13.22□□□□□ -0.29
SNCA-209ENST00000506244 CSF1P09603 554 aa13.22□□□□□ -0.29
SNCA-209ENST00000506244 OPN1MW2P0DN77 364 aa13.22□□□□□ -0.29
SNCA-209ENST00000506244 OPN1MW3P0DN78 364 aa13.22□□□□□ -0.29
SNCA-209ENST00000506244 LUMP51884 338 aaPredicted RBP13.22□□□□□ -0.29
SNCA-209ENST00000506244 SLC35B1P78383 322 aa13.22□□□□□ -0.29
SNCA-209ENST00000506244 TREML4Q6UXN2 200 aa13.22□□□□□ -0.29
SNCA-209ENST00000506244 GLDNQ6ZMI3 551 aaPredicted RBP13.22□□□□□ -0.29
SNCA-209ENST00000506244 PDPNQ86YL7 162 aa13.22□□□□□ -0.29
SNCA-209ENST00000506244 C11orf44Q8N8P7 122 aa13.22□□□□□ -0.29
SNCA-209ENST00000506244 OR5AU1Q8NGC0 362 aa13.22□□□□□ -0.29
SNCA-209ENST00000506244 ADTRPQ96IZ2 230 aa13.22□□□□□ -0.29
SNCA-209ENST00000506244 RNF5Q99942 180 aa13.22□□□□□ -0.29
SNCA-209ENST00000506244 MMP27Q9H306 513 aa13.22□□□□□ -0.29
SNCA-209ENST00000506244 NECAP2Q9NVZ3 263 aa13.22□□□□□ -0.29
SNCA-209ENST00000506244 SDHAF2Q9NX18 166 aa13.22□□□□□ -0.29
SNCA-209ENST00000506244 OR2W1Q9Y3N9 320 aa13.22□□□□□ -0.29
SNCA-209ENST00000506244 FBN3Q75N90 2809 aa13.21□□□□□ -0.29
SNCA-209ENST00000506244 SPDEFO95238 335 aa13.21□□□□□ -0.29
SNCA-209ENST00000506244 CD28P10747 220 aa13.21□□□□□ -0.29
SNCA-209ENST00000506244 PRSS3P35030 304 aa13.21□□□□□ -0.29
SNCA-209ENST00000506244 THBS3P49746 956 aa13.21□□□□□ -0.29
SNCA-209ENST00000506244 F2RL1P55085 397 aa13.21□□□□□ -0.29
SNCA-209ENST00000506244 NDUFA11Q86Y39 141 aa13.21□□□□□ -0.29
SNCA-209ENST00000506244 ZNF645Q8N7E2 425 aa13.21□□□□□ -0.29
SNCA-209ENST00000506244 NPBQ8NG41 125 aa13.21□□□□□ -0.29
SNCA-209ENST00000506244 TSNAXQ99598 290 aaKnown RBP13.21□□□□□ -0.29
SNCA-209ENST00000506244 ZNF107Q9UII5 783 aaPredicted RBP13.21□□□□□ -0.29
SNCA-209ENST00000506244 FAM25AB3EWG3 89 aa13.2□□□□□ -0.3
SNCA-209ENST00000506244 FAM25CB3EWG5 89 aa13.2□□□□□ -0.3
SNCA-209ENST00000506244 FAM25GB3EWG6 89 aa13.2□□□□□ -0.3
SNCA-209ENST00000506244 HPGDSO60760 199 aa13.2□□□□□ -0.3
SNCA-209ENST00000506244 NDUFA3O95167 84 aa13.2□□□□□ -0.3
SNCA-209ENST00000506244 HLA-DRB1P01911 266 aa13.2□□□□□ -0.3
SNCA-209ENST00000506244 RRASP10301 218 aa13.2□□□□□ -0.3
SNCA-209ENST00000506244 NFYAP23511 347 aaPredicted RBP13.2□□□□□ -0.3
SNCA-209ENST00000506244 PLGLAQ15195 96 aa13.2□□□□□ -0.3
SNCA-209ENST00000506244 RTL8BQ17RB0 113 aa13.2□□□□□ -0.3
SNCA-209ENST00000506244 C5orf64Q2M2E5 130 aa13.2□□□□□ -0.3
SNCA-209ENST00000506244 COMMD1Q8N668 190 aa13.2□□□□□ -0.3
SNCA-209ENST00000506244 GVQW1Q8N7I0 195 aa13.2□□□□□ -0.3
SNCA-209ENST00000506244 ZNF383Q8NA42 475 aa13.2□□□□□ -0.3
SNCA-209ENST00000506244 DRAXINQ8NBI3 349 aaPredicted RBP13.2□□□□□ -0.3
SNCA-209ENST00000506244 SCPEP1Q9HB40 452 aa13.2□□□□□ -0.3
SNCA-209ENST00000506244 SLC35D1Q9NTN3 355 aa13.2□□□□□ -0.3
SNCA-209ENST00000506244 ZNF580Q9UK33 172 aa13.2□□□□□ -0.3
SNCA-209ENST00000506244 TRRAPQ9Y4A5 3859 aa13.19□□□□□ -0.3
SNCA-209ENST00000506244 RRHO14718 337 aa13.19□□□□□ -0.3
SNCA-209ENST00000506244 HLA-DQB1P01920 261 aa13.19□□□□□ -0.3
SNCA-209ENST00000506244 OR5H8P0DN80 308 aa13.19□□□□□ -0.3
SNCA-209ENST00000506244 PTHLHP12272 177 aa13.19□□□□□ -0.3
SNCA-209ENST00000506244 ELK1P19419 428 aa13.19□□□□□ -0.3
SNCA-209ENST00000506244 TAS2R46P59540 309 aa13.19□□□□□ -0.3
SNCA-209ENST00000506244 STPG2Q8N412 459 aa13.19□□□□□ -0.3
SNCA-209ENST00000506244 OR5AP2Q8NGF4 316 aa13.19□□□□□ -0.3
SNCA-209ENST00000506244 C15orf40Q8WUR7 153 aa13.19□□□□□ -0.3
SNCA-209ENST00000506244 FLYWCH2Q96CP2 140 aaKnown RBP13.19□□□□□ -0.3
SNCA-209ENST00000506244 CITED2Q99967 270 aaPredicted RBP13.19□□□□□ -0.3
SNCA-209ENST00000506244 CCDC59Q9P031 241 aaKnown RBP13.19□□□□□ -0.3
SNCA-209ENST00000506244 ADAM30Q9UKF2 790 aa13.19□□□□□ -0.3
SNCA-209ENST00000506244 ANAPC10Q9UM13 185 aa13.19□□□□□ -0.3
SNCA-209ENST00000506244 MEIS3P1A6NDR6 274 aa13.18□□□□□ -0.3
SNCA-209ENST00000506244 PROP1O75360 226 aa13.18□□□□□ -0.3
SNCA-209ENST00000506244 TUSC2O75896 110 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms