RNA–Protein interactions for RNA: ENST00000506165.1

APBB3-211, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 2

Gene APBB3, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-211	ENST00000506165	SOX6	P35712	828 aa		13.75	□□□□□ -0.21
APBB3-211	ENST00000506165	TALDO1	P37837	337 aa		13.75	□□□□□ -0.21
APBB3-211	ENST00000506165	MNDA	P41218	407 aa		13.75	□□□□□ -0.21
APBB3-211	ENST00000506165	OR3A3	P47888	321 aa		13.75	□□□□□ -0.21
APBB3-211	ENST00000506165	STEAP3	Q658P3	488 aa		13.75	□□□□□ -0.21
APBB3-211	ENST00000506165	CNIH2	Q6PI25	160 aa		13.75	□□□□□ -0.21
APBB3-211	ENST00000506165	HOGA1	Q86XE5	327 aa		13.75	□□□□□ -0.21
APBB3-211	ENST00000506165	ZNF251	Q9BRH9	671 aa		13.75	□□□□□ -0.21
APBB3-211	ENST00000506165	ABHD14A	Q9BUJ0	271 aa		13.75	□□□□□ -0.21
APBB3-211	ENST00000506165	C11orf54	Q9H0W9	315 aa	Predicted RBP	13.75	□□□□□ -0.21
APBB3-211	ENST00000506165	EXTL2	Q9UBQ6	330 aa		13.75	□□□□□ -0.21
APBB3-211	ENST00000506165	FAM25A	B3EWG3	89 aa		13.74	□□□□□ -0.21
APBB3-211	ENST00000506165	FAM25C	B3EWG5	89 aa		13.74	□□□□□ -0.21
APBB3-211	ENST00000506165	FAM25G	B3EWG6	89 aa		13.74	□□□□□ -0.21
APBB3-211	ENST00000506165	HSD17B6	O14756	317 aa		13.74	□□□□□ -0.21
APBB3-211	ENST00000506165	HOXD3	P31249	432 aa	Predicted RBP	13.74	□□□□□ -0.21
APBB3-211	ENST00000506165	VDAC2	P45880	294 aa	Predicted RBP	13.74	□□□□□ -0.21
APBB3-211	ENST00000506165	MRPS15	P82914	257 aa	Known RBP	13.74	□□□□□ -0.21
APBB3-211	ENST00000506165	PITPNA	Q00169	270 aa		13.74	□□□□□ -0.21
APBB3-211	ENST00000506165	ZNF816	Q0VGE8	651 aa	Predicted RBP	13.74	□□□□□ -0.21
APBB3-211	ENST00000506165	SNX29P2	Q8IUI4	249 aa		13.74	□□□□□ -0.21
APBB3-211	ENST00000506165	H1FOO	Q8IZA3	346 aa	Predicted RBP	13.74	□□□□□ -0.21
APBB3-211	ENST00000506165	LINC00482	Q8N8I6	264 aa		13.74	□□□□□ -0.21
APBB3-211	ENST00000506165	OR10X1	Q8NGY0	326 aa		13.74	□□□□□ -0.21
APBB3-211	ENST00000506165	GPX8	Q8TED1	209 aa		13.74	□□□□□ -0.21
APBB3-211	ENST00000506165	TOMM40L	Q969M1	308 aa		13.74	□□□□□ -0.21
APBB3-211	ENST00000506165	ABHD1	Q96SE0	405 aa		13.74	□□□□□ -0.21
APBB3-211	ENST00000506165	RAB9B	Q9NP90	201 aa		13.74	□□□□□ -0.21
APBB3-211	ENST00000506165	RDH8	Q9NYR8	311 aa		13.74	□□□□□ -0.21
APBB3-211	ENST00000506165	PITPNC1	Q9UKF7	332 aa		13.74	□□□□□ -0.21
APBB3-211	ENST00000506165	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	13.74	□□□□□ -0.21
APBB3-211	ENST00000506165	SAA2-SAA4	A0A096LPE2	208 aa		13.73	□□□□□ -0.21
APBB3-211	ENST00000506165	SMIM31	A0A1B0GVY4	71 aa		13.73	□□□□□ -0.21
APBB3-211	ENST00000506165	FAM90A9P	A6NNJ1	464 aa		13.73	□□□□□ -0.21
APBB3-211	ENST00000506165	ZNF736	B4DX44	427 aa	Predicted RBP	13.73	□□□□□ -0.21
APBB3-211	ENST00000506165	SAA2	P0DJI9	122 aa	Predicted RBP	13.73	□□□□□ -0.21
APBB3-211	ENST00000506165	PF4V1	P10720	104 aa		13.73	□□□□□ -0.21
APBB3-211	ENST00000506165	CEACAM6	P40199	344 aa		13.73	□□□□□ -0.21
APBB3-211	ENST00000506165	KIR2DS1	Q14954	304 aa		13.73	□□□□□ -0.21
APBB3-211	ENST00000506165	BEST4	Q8NFU0	473 aa		13.73	□□□□□ -0.21
APBB3-211	ENST00000506165	MCFD2	Q8NI22	146 aa		13.73	□□□□□ -0.21
APBB3-211	ENST00000506165	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	13.73	□□□□□ -0.21
APBB3-211	ENST00000506165	ABHD14B	Q96IU4	210 aa		13.73	□□□□□ -0.21
APBB3-211	ENST00000506165	ANXA10	Q9UJ72	324 aa		13.73	□□□□□ -0.21
APBB3-211	ENST00000506165	MRPS7	Q9Y2R9	242 aa	Known RBP	13.73	□□□□□ -0.21
APBB3-211	ENST00000506165	TSSC4	Q9Y5U2	329 aa	Predicted RBP	13.73	□□□□□ -0.21
APBB3-211	ENST00000506165	PLEC	Q15149	4684 aa	Known RBP	13.72	□□□□□ -0.21
APBB3-211	ENST00000506165	IGHV1-3	A0A0C4DH29	117 aa		13.72	□□□□□ -0.21
APBB3-211	ENST00000506165	RGS5	O15539	181 aa		13.72	□□□□□ -0.21
APBB3-211	ENST00000506165	NAT1	P18440	290 aa		13.72	□□□□□ -0.21
APBB3-211	ENST00000506165	ZBTB25	P24278	435 aa		13.72	□□□□□ -0.21
APBB3-211	ENST00000506165	CEACAM3	P40198	252 aa		13.72	□□□□□ -0.21
APBB3-211	ENST00000506165	RPL39P5	Q59GN2	51 aa		13.72	□□□□□ -0.21
APBB3-211	ENST00000506165	RNASE12	Q5GAN4	147 aa	Known RBP	13.72	□□□□□ -0.21
APBB3-211	ENST00000506165	ETV3L	Q6ZN32	361 aa		13.72	□□□□□ -0.21
APBB3-211	ENST00000506165	DRAM1	Q8N682	238 aa		13.72	□□□□□ -0.21
APBB3-211	ENST00000506165	RPE	Q96AT9	228 aa		13.72	□□□□□ -0.21
APBB3-211	ENST00000506165	C6orf62	Q9GZU0	229 aa	Predicted RBP	13.72	□□□□□ -0.21
APBB3-211	ENST00000506165	ADAM30	Q9UKF2	790 aa		13.72	□□□□□ -0.21
APBB3-211	ENST00000506165	RNF150	Q9ULK6	438 aa		13.72	□□□□□ -0.21
APBB3-211	ENST00000506165	IGHV3-72	A0A0B4J1Y9	119 aa		13.71	□□□□□ -0.21
APBB3-211	ENST00000506165		A6NHS1	94 aa		13.71	□□□□□ -0.21
APBB3-211	ENST00000506165	OOSP1	A8MZH6	123 aa		13.71	□□□□□ -0.21
APBB3-211	ENST00000506165	ITGB1BP1	O14713	200 aa		13.71	□□□□□ -0.21
APBB3-211	ENST00000506165	PEX14	O75381	377 aa		13.71	□□□□□ -0.21
APBB3-211	ENST00000506165	RGS11	O94810	467 aa		13.71	□□□□□ -0.21
APBB3-211	ENST00000506165	DIRAS3	O95661	229 aa		13.71	□□□□□ -0.21
APBB3-211	ENST00000506165	PF4	P02776	101 aa		13.71	□□□□□ -0.21
APBB3-211	ENST00000506165	PRSS3	P35030	304 aa		13.71	□□□□□ -0.21
APBB3-211	ENST00000506165	LINC00205	P59089	165 aa		13.71	□□□□□ -0.21
APBB3-211	ENST00000506165	C10orf99	Q6UWK7	81 aa		13.71	□□□□□ -0.21
APBB3-211	ENST00000506165	ZNF833P	Q6ZTB9	187 aa		13.71	□□□□□ -0.21
APBB3-211	ENST00000506165	LYSMD2	Q8IV50	215 aa		13.71	□□□□□ -0.21
APBB3-211	ENST00000506165	OR2AK2	Q8NG84	335 aa		13.71	□□□□□ -0.21
APBB3-211	ENST00000506165	OR56B4	Q8NH76	319 aa		13.71	□□□□□ -0.21
APBB3-211	ENST00000506165	SOST	Q9BQB4	213 aa		13.71	□□□□□ -0.21
APBB3-211	ENST00000506165	MRPL20	Q9BYC9	149 aa	Known RBP	13.71	□□□□□ -0.21
APBB3-211	ENST00000506165	IGKV1D-13	A0A0B4J2D9	117 aa		13.7	□□□□□ -0.22
APBB3-211	ENST00000506165	HSPA12A	O43301	675 aa		13.7	□□□□□ -0.22
APBB3-211	ENST00000506165	LANCL1	O43813	399 aa		13.7	□□□□□ -0.22
APBB3-211	ENST00000506165	TUSC2	O75896	110 aa		13.7	□□□□□ -0.22
APBB3-211	ENST00000506165	SNRNP70	P08621	437 aa	Known RBP	13.7	□□□□□ -0.22
APBB3-211	ENST00000506165	IGKV1-13	P0DP09	117 aa		13.7	□□□□□ -0.22
APBB3-211	ENST00000506165	NFYA	P23511	347 aa	Predicted RBP	13.7	□□□□□ -0.22
APBB3-211	ENST00000506165	TNFSF8	P32971	234 aa		13.7	□□□□□ -0.22
APBB3-211	ENST00000506165	DGCR2	P98153	550 aa		13.7	□□□□□ -0.22
APBB3-211	ENST00000506165	OR8H3	Q8N146	312 aa		13.7	□□□□□ -0.22
APBB3-211	ENST00000506165	OR52I2	Q8NH67	350 aa		13.7	□□□□□ -0.22
APBB3-211	ENST00000506165	CREB3L1	Q96BA8	519 aa		13.7	□□□□□ -0.22
APBB3-211	ENST00000506165	DGCR14	Q96DF8	476 aa	Known RBP	13.7	□□□□□ -0.22
APBB3-211	ENST00000506165	ABCB10	Q9NRK6	738 aa		13.7	□□□□□ -0.22
APBB3-211	ENST00000506165	TCRBV4S1A1T	A0A5B7	111 aa		13.69	□□□□□ -0.22
APBB3-211	ENST00000506165	GAPDH	P04406	335 aa	Known RBP	13.69	□□□□□ -0.22
APBB3-211	ENST00000506165	LPL	P06858	475 aa		13.69	□□□□□ -0.22
APBB3-211	ENST00000506165	RAB7A	P51149	207 aa		13.69	□□□□□ -0.22
APBB3-211	ENST00000506165	OR10J5	Q8NHC4	309 aa		13.69	□□□□□ -0.22
APBB3-211	ENST00000506165	NABP2	Q9BQ15	211 aa		13.69	□□□□□ -0.22
APBB3-211	ENST00000506165		U3KQK5	164 aa		13.69	□□□□□ -0.22
APBB3-211	ENST00000506165	AMY1A	P04745	511 aa		13.68	□□□□□ -0.22
APBB3-211	ENST00000506165	AMY2A	P04746	511 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms