RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 HADHBP55084 474 aaKnown RBP0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 TSPEAR-AS2P59090 65 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 FGF12P61328 243 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 RELAQ04206 551 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 UAP1Q16222 522 aaPredicted RBP0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 TBC1D28Q2M2D7 210 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 HSP90B2PQ58FF3 399 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 PABPC1L2AQ5JQF8 200 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 AGTRAPQ6RW13 159 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 GLT6D1Q7Z4J2 308 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 SYCE1Q8N0S2 351 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 SLC35F6Q8N357 371 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 YIPF7Q8N8F6 280 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 TMEM75Q8N9X5 138 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 OR4X2Q8NGF9 303 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 OR2D3Q8NGH3 330 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 STOML3Q8TAV4 291 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 RNASEH2CQ8TDP1 164 aaKnown RBP0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 TNFAIP8L1Q8WVP5 186 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 TLCD1Q96CP7 247 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 FAM210AQ96ND0 272 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 TRNT1Q96Q11 434 aaKnown RBP0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 OR7D2Q96RA2 312 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 ACBD6Q9BR61 282 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 TMEM208Q9BTX3 173 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 ZNF471Q9BX82 626 aaPredicted RBP0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 PECRQ9BY49 303 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 CHMP4BQ9H444 224 aaKnown RBP0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 C11orf1Q9H5F2 150 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 TREM1Q9NP99 234 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 C1orf109Q9NX04 203 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 MS4A12Q9NXJ0 267 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 SYNRGQ9UMZ2 1314 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 SIPA1L1O43166 1804 aa0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 DENND4BO75064 1496 aaPredicted RBP0.54□□□□□ -2.32
HMGB1P29-201ENST00000505659 HEATR5BQ9P2D3 2071 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 TRGV2A0A075B6R0 118 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 TRAV8-1A0A0A6YYK1 113 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 HSBP1L1C9JCN9 74 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 J3QQQ9 107 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 UBE2L6O14933 153 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 ZW10O43264 779 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 GNRH2O43555 120 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 MPZL2O60487 215 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 IGLV3-27P01718 113 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 GP1BAP07359 652 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 LINC00614P0C842 121 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 ADORA1P30542 326 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 ALDH3A1P30838 453 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 CA7P43166 264 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 PSMD7P51665 324 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 RAP1GDS1P52306 607 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 CTBP2P56545 445 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 H2BFSP57053 126 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 RPL26P61254 145 aaKnown RBP0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 ERHP84090 104 aaKnown RBP0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 GNA12Q03113 381 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 ZNF90Q03938 601 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 SLAMF1Q13291 335 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 ZNHIT3Q15649 155 aaPredicted RBP0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 DNAL1Q4LDG9 190 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 FAM45BPQ6NSW5 357 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 AMTNQ6UX39 209 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 NAA40Q86UY6 237 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 PLCZ1Q86YW0 608 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 BLIDQ8IZY5 108 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 OR5J2Q8NH18 312 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 CYGBQ8WWM9 190 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 ACY3Q96HD9 319 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 RBP7Q96R05 134 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 RETNLBQ9BQ08 111 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 ZNF426Q9BUY5 554 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 SPZ1Q9BXG8 430 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 NKX6-2Q9C056 277 aaPredicted RBP0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 NDEL1Q9GZM8 345 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 C16orf95Q9H693 158 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 BABAM2Q9NXR7 383 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 RPL26L1Q9UNX3 145 aaKnown RBP0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 GREB1Q4ZG55 1949 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 CLUHO75153 1309 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 PLCH2O75038 1416 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 NPATQ14207 1427 aa0.53□□□□□ -2.32
HMGB1P29-201ENST00000505659 DISP1Q96F81 1524 aa0.53□□□□□ -2.33
HMGB1P29-201ENST00000505659 THSD7AQ9UPZ6 1657 aa0.53□□□□□ -2.33
HMGB1P29-201ENST00000505659 MEIKINA0A087WXM9 373 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 TMEM213A2RRL7 107 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 METTL15A6NJ78 407 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 C11orf86A6NJI1 115 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 OR5K4A6NMS3 321 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 FAM25EA8MYX2 175 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 OR11H12B2RN74 326 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 MKRN2OSH3BPM6 223 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 GOLGA8RI6L899 631 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 CCRL2O00421 344 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 TOX3O15405 576 aaPredicted RBP0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 NDUFB2O95178 105 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 ASS1P00966 412 aaKnown RBP0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 NPYP01303 97 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 IGHV1-69P01742 117 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms