RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 STEAP1BQ6NZ63 245 aa8.08□□□□□ -1.12
NUP54-203ENST00000504173 Q6YL49 198 aa8.08□□□□□ -1.12
NUP54-203ENST00000504173 TGIF2LXQ8IUE1 241 aa8.08□□□□□ -1.12
NUP54-203ENST00000504173 ODF3L1Q8IXM7 274 aa8.08□□□□□ -1.12
NUP54-203ENST00000504173 OR8H3Q8N146 312 aa8.08□□□□□ -1.12
NUP54-203ENST00000504173 GDPD1Q8N9F7 314 aa8.08□□□□□ -1.12
NUP54-203ENST00000504173 SSMEM1Q8WWF3 244 aa8.08□□□□□ -1.12
NUP54-203ENST00000504173 RTN4IP1Q8WWV3 396 aaPredicted RBP8.08□□□□□ -1.12
NUP54-203ENST00000504173 S100ZQ8WXG8 99 aa8.08□□□□□ -1.12
NUP54-203ENST00000504173 ST6GALNAC6Q969X2 333 aa8.08□□□□□ -1.12
NUP54-203ENST00000504173 JMJD8Q96S16 334 aa8.08□□□□□ -1.12
NUP54-203ENST00000504173 S1PR3Q99500 378 aa8.08□□□□□ -1.12
NUP54-203ENST00000504173 SSX3Q99909 188 aa8.08□□□□□ -1.12
NUP54-203ENST00000504173 AGMATQ9BSE5 352 aa8.08□□□□□ -1.12
NUP54-203ENST00000504173 MEGF9Q9H1U4 602 aa8.08□□□□□ -1.12
NUP54-203ENST00000504173 DPAGT1Q9H3H5 408 aa8.08□□□□□ -1.12
NUP54-203ENST00000504173 GHITMQ9H3K2 345 aa8.08□□□□□ -1.12
NUP54-203ENST00000504173 PRDM13Q9H4Q3 707 aa8.08□□□□□ -1.12
NUP54-203ENST00000504173 AKIP1Q9NQ31 210 aa8.08□□□□□ -1.12
NUP54-203ENST00000504173 TNFRSF19Q9NS68 423 aa8.08□□□□□ -1.12
NUP54-203ENST00000504173 IGHV1-3A0A0C4DH29 117 aa8.07□□□□□ -1.12
NUP54-203ENST00000504173 A0A1W2PPI3 338 aa8.07□□□□□ -1.12
NUP54-203ENST00000504173 DNAJC9-AS1A6NH13 148 aa8.07□□□□□ -1.12
NUP54-203ENST00000504173 VGLL3A8MV65 326 aa8.07□□□□□ -1.12
NUP54-203ENST00000504173 H3BUX3 64 aa8.07□□□□□ -1.12
NUP54-203ENST00000504173 HOXA3O43365 443 aaPredicted RBP8.07□□□□□ -1.12
NUP54-203ENST00000504173 TXNL1O43396 289 aa8.07□□□□□ -1.12
NUP54-203ENST00000504173 RAB3DO95716 219 aa8.07□□□□□ -1.12
NUP54-203ENST00000504173 PPYP01298 95 aa8.07□□□□□ -1.12
NUP54-203ENST00000504173 IGHV4-59P01825 116 aa8.07□□□□□ -1.12
NUP54-203ENST00000504173 CD74P04233 296 aa8.07□□□□□ -1.12
NUP54-203ENST00000504173 AKAIN1P0CW23 69 aa8.07□□□□□ -1.12
NUP54-203ENST00000504173 BRS3P32247 399 aa8.07□□□□□ -1.12
NUP54-203ENST00000504173 IER3P46695 156 aa8.07□□□□□ -1.12
NUP54-203ENST00000504173 INPP1P49441 399 aa8.07□□□□□ -1.12
NUP54-203ENST00000504173 FXYD4P59646 89 aa8.07□□□□□ -1.12
NUP54-203ENST00000504173 HILS1P60008 231 aa8.07□□□□□ -1.12
NUP54-203ENST00000504173 AANATQ16613 207 aa8.07□□□□□ -1.12
NUP54-203ENST00000504173 AWAT1Q58HT5 328 aa8.07□□□□□ -1.12
NUP54-203ENST00000504173 RPL39P5Q59GN2 51 aa8.07□□□□□ -1.12
NUP54-203ENST00000504173 FAM71F2Q6NXP2 309 aa8.07□□□□□ -1.12
NUP54-203ENST00000504173 ZNF833PQ6ZTB9 187 aa8.07□□□□□ -1.12
NUP54-203ENST00000504173 MOB3BQ86TA1 216 aa8.07□□□□□ -1.12
NUP54-203ENST00000504173 TMEM17Q86X19 198 aa8.07□□□□□ -1.12
NUP54-203ENST00000504173 MFSD4AQ8N468 514 aa8.07□□□□□ -1.12
NUP54-203ENST00000504173 DRAM1Q8N682 238 aa8.07□□□□□ -1.12
NUP54-203ENST00000504173 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.07□□□□□ -1.12
NUP54-203ENST00000504173 OR6F1Q8NGZ6 308 aa8.07□□□□□ -1.12
NUP54-203ENST00000504173 OR56B4Q8NH76 319 aa8.07□□□□□ -1.12
NUP54-203ENST00000504173 SECTM1Q8WVN6 248 aa8.07□□□□□ -1.12
NUP54-203ENST00000504173 GIMAP1Q8WWP7 306 aa8.07□□□□□ -1.12
NUP54-203ENST00000504173 TRIM63Q969Q1 353 aa8.07□□□□□ -1.12
NUP54-203ENST00000504173 ZNF2Q9BSG1 426 aaPredicted RBP8.07□□□□□ -1.12
NUP54-203ENST00000504173 TINAGL1Q9GZM7 467 aaPredicted RBP8.07□□□□□ -1.12
NUP54-203ENST00000504173 IGHV3-72A0A0B4J1Y9 119 aa8.06□□□□□ -1.12
NUP54-203ENST00000504173 IGKV1D-13A0A0B4J2D9 117 aa8.06□□□□□ -1.12
NUP54-203ENST00000504173 ANKRD20A5PA0PJZ0 165 aa8.06□□□□□ -1.12
NUP54-203ENST00000504173 M0R1X1 148 aa8.06□□□□□ -1.12
NUP54-203ENST00000504173 TIMM23O14925 209 aa8.06□□□□□ -1.12
NUP54-203ENST00000504173 SLC22A5O76082 557 aa8.06□□□□□ -1.12
NUP54-203ENST00000504173 AMY2AP04746 511 aa8.06□□□□□ -1.12
NUP54-203ENST00000504173 IGKV1-13P0DP09 117 aa8.06□□□□□ -1.12
NUP54-203ENST00000504173 RAB13P51153 203 aa8.06□□□□□ -1.12
NUP54-203ENST00000504173 DYNLT3P51808 116 aa8.06□□□□□ -1.12
NUP54-203ENST00000504173 AP3S2P59780 193 aa8.06□□□□□ -1.12
NUP54-203ENST00000504173 MEF2DQ14814 521 aa8.06□□□□□ -1.12
NUP54-203ENST00000504173 SLC9A3R2Q15599 337 aa8.06□□□□□ -1.12
NUP54-203ENST00000504173 LY6EQ16553 131 aa8.06□□□□□ -1.12
NUP54-203ENST00000504173 TRIQKQ629K1 86 aa8.06□□□□□ -1.12
NUP54-203ENST00000504173 ZNF57Q68EA5 555 aaPredicted RBP8.06□□□□□ -1.12
NUP54-203ENST00000504173 ZNF660Q6AZW8 331 aaPredicted RBP8.06□□□□□ -1.12
NUP54-203ENST00000504173 DHRS11Q6UWP2 260 aa8.06□□□□□ -1.12
NUP54-203ENST00000504173 TOMM5Q8N4H5 51 aa8.06□□□□□ -1.12
NUP54-203ENST00000504173 ARRDC1Q8N5I2 433 aa8.06□□□□□ -1.12
NUP54-203ENST00000504173 TMEM86BQ8N661 226 aa8.06□□□□□ -1.12
NUP54-203ENST00000504173 ZNF645Q8N7E2 425 aa8.06□□□□□ -1.12
NUP54-203ENST00000504173 OR4D10Q8NGI6 311 aa8.06□□□□□ -1.12
NUP54-203ENST00000504173 OR4C16Q8NGL9 310 aa8.06□□□□□ -1.12
NUP54-203ENST00000504173 OR5R1Q8NH85 324 aa8.06□□□□□ -1.12
NUP54-203ENST00000504173 CAPSLQ8WWF8 208 aa8.06□□□□□ -1.12
NUP54-203ENST00000504173 MOB3AQ96BX8 217 aa8.06□□□□□ -1.12
NUP54-203ENST00000504173 DUX5Q96PT3 197 aa8.06□□□□□ -1.12
NUP54-203ENST00000504173 SDHCQ99643 169 aaPredicted RBP8.06□□□□□ -1.12
NUP54-203ENST00000504173 ZNF251Q9BRH9 671 aa8.06□□□□□ -1.12
NUP54-203ENST00000504173 MRPL20Q9BYC9 149 aaKnown RBP8.06□□□□□ -1.12
NUP54-203ENST00000504173 WDR12Q9GZL7 423 aaKnown RBP8.06□□□□□ -1.12
NUP54-203ENST00000504173 SLC5A7Q9GZV3 580 aa8.06□□□□□ -1.12
NUP54-203ENST00000504173 ESM1Q9NQ30 184 aa8.06□□□□□ -1.12
NUP54-203ENST00000504173 SDHAF2Q9NX18 166 aa8.06□□□□□ -1.12
NUP54-203ENST00000504173 POMT1Q9Y6A1 747 aa8.06□□□□□ -1.12
NUP54-203ENST00000504173 DISC1C4P0D8 188 aa8.05□□□□□ -1.12
NUP54-203ENST00000504173 CD24P25063 80 aa8.05□□□□□ -1.12
NUP54-203ENST00000504173 FAUP35544 74 aaKnown RBP8.05□□□□□ -1.12
NUP54-203ENST00000504173 LSAMPQ13449 338 aa8.05□□□□□ -1.12
NUP54-203ENST00000504173 KLF9Q13886 244 aaPredicted RBP8.05□□□□□ -1.12
NUP54-203ENST00000504173 ZNF846Q147U1 533 aa8.05□□□□□ -1.12
NUP54-203ENST00000504173 BAK1Q16611 211 aa8.05□□□□□ -1.12
NUP54-203ENST00000504173 SCGB2B2Q4G0G5 96 aa8.05□□□□□ -1.12
NUP54-203ENST00000504173 FAAP20Q6NZ36 180 aa8.05□□□□□ -1.12
NUP54-203ENST00000504173 ZDHHC22Q8N966 263 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms