RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 RPL39P5Q59GN2 51 aa17.26■□□□□ 0.35
LSM6-203ENST00000503982 RITA1Q96K30 269 aa17.26■□□□□ 0.35
LSM6-203ENST00000503982 OR51J1Q9H342 316 aa17.26■□□□□ 0.35
LSM6-203ENST00000503982 SCOCQ9UIL1 159 aa17.26■□□□□ 0.35
LSM6-203ENST00000503982 NAPSAO96009 420 aa17.25■□□□□ 0.35
LSM6-203ENST00000503982 GSTP1P09211 210 aaKnown RBP17.25■□□□□ 0.35
LSM6-203ENST00000503982 CEACAM6P40199 344 aa17.25■□□□□ 0.35
LSM6-203ENST00000503982 HLA-DRB3P79483 266 aa17.25■□□□□ 0.35
LSM6-203ENST00000503982 MRPS15P82914 257 aaKnown RBP17.25■□□□□ 0.35
LSM6-203ENST00000503982 DGCR2P98153 550 aa17.25■□□□□ 0.35
LSM6-203ENST00000503982 CD69Q07108 199 aa17.25■□□□□ 0.35
LSM6-203ENST00000503982 C5orf64Q2M2E5 130 aa17.25■□□□□ 0.35
LSM6-203ENST00000503982 LIN54Q6MZP7 749 aa17.25■□□□□ 0.35
LSM6-203ENST00000503982 GLDNQ6ZMI3 551 aaPredicted RBP17.25■□□□□ 0.35
LSM6-203ENST00000503982 OR56B1Q8NGI3 324 aa17.25■□□□□ 0.35
LSM6-203ENST00000503982 SLC25A46Q96AG3 418 aa17.25■□□□□ 0.35
LSM6-203ENST00000503982 ABHD14BQ96IU4 210 aa17.25■□□□□ 0.35
LSM6-203ENST00000503982 CMSS1Q9BQ75 279 aaKnown RBP17.25■□□□□ 0.35
LSM6-203ENST00000503982 IFI27L2Q9H2X8 130 aa17.25■□□□□ 0.35
LSM6-203ENST00000503982 MGAT4AQ9UM21 535 aa17.25■□□□□ 0.35
LSM6-203ENST00000503982 ETV7Q9Y603 341 aa17.25■□□□□ 0.35
LSM6-203ENST00000503982 G3V318 75 aa17.24■□□□□ 0.35
LSM6-203ENST00000503982 HLA-DRB1P01911 266 aa17.24■□□□□ 0.35
LSM6-203ENST00000503982 CLEC2LP0C7M8 214 aa17.24■□□□□ 0.35
LSM6-203ENST00000503982 RPS19P39019 145 aaKnown RBP17.24■□□□□ 0.35
LSM6-203ENST00000503982 CFHR3Q02985 330 aa17.24■□□□□ 0.35
LSM6-203ENST00000503982 ECSCRQ19T08 205 aa17.24■□□□□ 0.35
LSM6-203ENST00000503982 FAM71F2Q6NXP2 309 aa17.24■□□□□ 0.35
LSM6-203ENST00000503982 ZNF880Q6PDB4 577 aa17.24■□□□□ 0.35
LSM6-203ENST00000503982 C4orf3Q8WVX3 66 aa17.24■□□□□ 0.35
LSM6-203ENST00000503982 EDARADDQ8WWZ3 215 aa17.24■□□□□ 0.35
LSM6-203ENST00000503982 OR5B12Q96R08 314 aa17.24■□□□□ 0.35
LSM6-203ENST00000503982 DAPK2Q9UIK4 370 aa17.24■□□□□ 0.35
LSM6-203ENST00000503982 A3GALT2U3KPV4 340 aa17.24■□□□□ 0.35
LSM6-203ENST00000503982 TRAV41A0A0B4J266 112 aa17.23■□□□□ 0.35
LSM6-203ENST00000503982 SCGNO76038 276 aa17.23■□□□□ 0.35
LSM6-203ENST00000503982 ZBTB25P24278 435 aa17.23■□□□□ 0.35
LSM6-203ENST00000503982 TGFBR1P36897 503 aa17.23■□□□□ 0.35
LSM6-203ENST00000503982 LUMP51884 338 aaPredicted RBP17.23■□□□□ 0.35
LSM6-203ENST00000503982 TMBIM6P55061 237 aa17.23■□□□□ 0.35
LSM6-203ENST00000503982 NCS1P62166 190 aa17.23■□□□□ 0.35
LSM6-203ENST00000503982 MXD1Q05195 221 aa17.23■□□□□ 0.35
LSM6-203ENST00000503982 C9orf66Q5T8R8 295 aa17.23■□□□□ 0.35
LSM6-203ENST00000503982 GPR107Q5VW38 600 aa17.23■□□□□ 0.35
LSM6-203ENST00000503982 OR11H1Q8NG94 326 aa17.23■□□□□ 0.35
LSM6-203ENST00000503982 RAB2BQ8WUD1 216 aa17.23■□□□□ 0.35
LSM6-203ENST00000503982 KCTD12Q96CX2 325 aaKnown RBP17.23■□□□□ 0.35
LSM6-203ENST00000503982 ARHGAP5-AS1Q96IT6 56 aa17.23■□□□□ 0.35
LSM6-203ENST00000503982 FBXL15Q9H469 300 aa17.23■□□□□ 0.35
LSM6-203ENST00000503982 C12orf4Q9NQ89 552 aa17.23■□□□□ 0.35
LSM6-203ENST00000503982 OR1A1Q9P1Q5 309 aa17.23■□□□□ 0.35
LSM6-203ENST00000503982 IGHV7-81A0A0B4J1V7 117 aa17.22■□□□□ 0.35
LSM6-203ENST00000503982 SEC14L6B5MCN3 397 aa17.22■□□□□ 0.35
LSM6-203ENST00000503982 PSMB8P28062 276 aa17.22■□□□□ 0.35
LSM6-203ENST00000503982 TMEM50BP56557 158 aa17.22■□□□□ 0.35
LSM6-203ENST00000503982 VBP1P61758 197 aa17.22■□□□□ 0.35
LSM6-203ENST00000503982 DCTN2Q13561 401 aaKnown RBP17.22■□□□□ 0.35
LSM6-203ENST00000503982 RNF152Q8N8N0 203 aa17.22■□□□□ 0.35
LSM6-203ENST00000503982 CLCC1Q96S66 551 aa17.22■□□□□ 0.35
LSM6-203ENST00000503982 PECRQ9BY49 303 aa17.22■□□□□ 0.35
LSM6-203ENST00000503982 NAA50Q9GZZ1 169 aaKnown RBP17.22■□□□□ 0.35
LSM6-203ENST00000503982 PARP12Q9H0J9 701 aaKnown RBP17.22■□□□□ 0.35
LSM6-203ENST00000503982 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.22■□□□□ 0.35
LSM6-203ENST00000503982 RNF150Q9ULK6 438 aa17.22■□□□□ 0.35
LSM6-203ENST00000503982 VSIG4Q9Y279 399 aa17.22■□□□□ 0.35
LSM6-203ENST00000503982 TRBV6-6A0A0A6YYG2 114 aa17.21■□□□□ 0.35
LSM6-203ENST00000503982 SMIM30A4D0T7 59 aa17.21■□□□□ 0.35
LSM6-203ENST00000503982 METTL21EPA6NDL7 271 aa17.21■□□□□ 0.35
LSM6-203ENST00000503982 RAB27BO00194 218 aa17.21■□□□□ 0.35
LSM6-203ENST00000503982 SCTP09683 121 aa17.21■□□□□ 0.35
LSM6-203ENST00000503982 MC5RP33032 325 aa17.21■□□□□ 0.35
LSM6-203ENST00000503982 LSM3P62310 102 aaKnown RBP17.21■□□□□ 0.35
LSM6-203ENST00000503982 NPBQ8NG41 125 aa17.21■□□□□ 0.35
LSM6-203ENST00000503982 ZNF221Q9UK13 617 aa17.21■□□□□ 0.35
LSM6-203ENST00000503982 ZNF580Q9UK33 172 aa17.21■□□□□ 0.35
LSM6-203ENST00000503982 SPATA2Q9UM82 520 aa17.21■□□□□ 0.35
LSM6-203ENST00000503982 WASHC3Q9Y3C0 194 aa17.21■□□□□ 0.35
LSM6-203ENST00000503982 A0A0B4J203 849 aa17.2■□□□□ 0.34
LSM6-203ENST00000503982 A0A1W2PN81 502 aa17.2■□□□□ 0.34
LSM6-203ENST00000503982 OR5H14A6NHG9 310 aa17.2■□□□□ 0.34
LSM6-203ENST00000503982 RAMP3O60896 148 aa17.2■□□□□ 0.34
LSM6-203ENST00000503982 NDUFA3O95167 84 aa17.2■□□□□ 0.34
LSM6-203ENST00000503982 CT45A6P0DMU7 189 aa17.2■□□□□ 0.34
LSM6-203ENST00000503982 CT45A5P0DMU8 189 aa17.2■□□□□ 0.34
LSM6-203ENST00000503982 CT45A7P0DMV0 189 aa17.2■□□□□ 0.34
LSM6-203ENST00000503982 CHRNA7P36544 502 aa17.2■□□□□ 0.34
LSM6-203ENST00000503982 ECI1P42126 302 aa17.2■□□□□ 0.34
LSM6-203ENST00000503982 PLA2G7Q13093 441 aa17.2■□□□□ 0.34
LSM6-203ENST00000503982 ARL6IP1Q15041 203 aa17.2■□□□□ 0.34
LSM6-203ENST00000503982 VAX1Q5SQQ9 334 aa17.2■□□□□ 0.34
LSM6-203ENST00000503982 LGALS14Q8TCE9 139 aa17.2■□□□□ 0.34
LSM6-203ENST00000503982 C11orf54Q9H0W9 315 aaPredicted RBP17.2■□□□□ 0.34
LSM6-203ENST00000503982 KLK15Q9H2R5 256 aa17.2■□□□□ 0.34
LSM6-203ENST00000503982 GHITMQ9H3K2 345 aa17.2■□□□□ 0.34
LSM6-203ENST00000503982 GNB4Q9HAV0 340 aa17.2■□□□□ 0.34
LSM6-203ENST00000503982 Q9N2K0 584 aa17.2■□□□□ 0.34
LSM6-203ENST00000503982 A0A0A6YYH2 397 aa17.19■□□□□ 0.34
LSM6-203ENST00000503982 A6NJ64 397 aa17.19■□□□□ 0.34
LSM6-203ENST00000503982 RRHO14718 337 aa17.19■□□□□ 0.34
LSM6-203ENST00000503982 CD3GP09693 182 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms