RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 C9orf66Q5T8R8 295 aa9.33□□□□□ -0.92
MED28-203ENST00000503945 HES5Q5TA89 166 aa9.33□□□□□ -0.92
MED28-203ENST00000503945 FAM131AQ6UXB0 335 aa9.33□□□□□ -0.92
MED28-203ENST00000503945 IZUMO2Q6UXV1 221 aa9.33□□□□□ -0.92
MED28-203ENST00000503945 GLDNQ6ZMI3 551 aaPredicted RBP9.33□□□□□ -0.92
MED28-203ENST00000503945 ZNF491Q8N8L2 437 aa9.33□□□□□ -0.92
MED28-203ENST00000503945 OR5AN1Q8NGI8 311 aa9.33□□□□□ -0.92
MED28-203ENST00000503945 RAB3CQ96E17 227 aa9.33□□□□□ -0.92
MED28-203ENST00000503945 HDHD3Q9BSH5 251 aaPredicted RBP9.33□□□□□ -0.92
MED28-203ENST00000503945 CENPOQ9BU64 300 aa9.33□□□□□ -0.92
MED28-203ENST00000503945 RAB26Q9ULW5 256 aa9.33□□□□□ -0.92
MED28-203ENST00000503945 WASHC3Q9Y3C0 194 aa9.33□□□□□ -0.92
MED28-203ENST00000503945 TENM3Q9P273 2699 aa9.33□□□□□ -0.92
MED28-203ENST00000503945 TRDV1A0A1B0GX56 115 aa9.32□□□□□ -0.92
MED28-203ENST00000503945 METTL21EPA6NDL7 271 aa9.32□□□□□ -0.92
MED28-203ENST00000503945 FOXI3A8MTJ6 420 aaPredicted RBP9.32□□□□□ -0.92
MED28-203ENST00000503945 SEC14L6B5MCN3 397 aa9.32□□□□□ -0.92
MED28-203ENST00000503945 H0YJW9 148 aa9.32□□□□□ -0.92
MED28-203ENST00000503945 FCN1O00602 326 aa9.32□□□□□ -0.92
MED28-203ENST00000503945 ATP6V0E1O15342 81 aa9.32□□□□□ -0.92
MED28-203ENST00000503945 NDUFA3O95167 84 aa9.32□□□□□ -0.92
MED28-203ENST00000503945 GADD45AP24522 165 aa9.32□□□□□ -0.92
MED28-203ENST00000503945 RPS16P62249 146 aaKnown RBP9.32□□□□□ -0.92
MED28-203ENST00000503945 CX3CL1P78423 397 aa9.32□□□□□ -0.92
MED28-203ENST00000503945 HLA-DRB3P79483 266 aa9.32□□□□□ -0.92
MED28-203ENST00000503945 CD69Q07108 199 aa9.32□□□□□ -0.92
MED28-203ENST00000503945 KIAA0141Q14154 515 aaPredicted RBP9.32□□□□□ -0.92
MED28-203ENST00000503945 PLAC9Q5JTB6 97 aa9.32□□□□□ -0.92
MED28-203ENST00000503945 ZNF562Q6V9R5 426 aa9.32□□□□□ -0.92
MED28-203ENST00000503945 ZNF367Q7RTV3 350 aa9.32□□□□□ -0.92
MED28-203ENST00000503945 DRAXINQ8NBI3 349 aaPredicted RBP9.32□□□□□ -0.92
MED28-203ENST00000503945 MINDY2Q8NBR6 621 aa9.32□□□□□ -0.92
MED28-203ENST00000503945 ABHD5Q8WTS1 349 aa9.32□□□□□ -0.92
MED28-203ENST00000503945 WWC2-AS2Q96NR7 200 aa9.32□□□□□ -0.92
MED28-203ENST00000503945 FBXL15Q9H469 300 aa9.32□□□□□ -0.92
MED28-203ENST00000503945 RDH8Q9NYR8 311 aa9.32□□□□□ -0.92
MED28-203ENST00000503945 OR1A1Q9P1Q5 309 aa9.32□□□□□ -0.92
MED28-203ENST00000503945 TMEM272A0A1B0GTI8 110 aa9.31□□□□□ -0.92
MED28-203ENST00000503945 IFITM5A6NNB3 132 aa9.31□□□□□ -0.92
MED28-203ENST00000503945 LDLRAD4O15165 306 aa9.31□□□□□ -0.92
MED28-203ENST00000503945 MRPS14O60783 128 aaKnown RBP9.31□□□□□ -0.92
MED28-203ENST00000503945 TFAP2AP05549 437 aa9.31□□□□□ -0.92
MED28-203ENST00000503945 OR8U8P0C7N1 319 aa9.31□□□□□ -0.92
MED28-203ENST00000503945 MYL9P24844 172 aa9.31□□□□□ -0.92
MED28-203ENST00000503945 TALDO1P37837 337 aa9.31□□□□□ -0.92
MED28-203ENST00000503945 TBCEQ15813 527 aaPredicted RBP9.31□□□□□ -0.92
MED28-203ENST00000503945 ZNF260Q3ZCT1 412 aa9.31□□□□□ -0.92
MED28-203ENST00000503945 AKIRIN2Q53H80 203 aa9.31□□□□□ -0.92
MED28-203ENST00000503945 TCTEX1D1Q8N7M0 179 aa9.31□□□□□ -0.92
MED28-203ENST00000503945 OR4A4PQ8NGN8 299 aa9.31□□□□□ -0.92
MED28-203ENST00000503945 OR10R2Q8NGX6 335 aa9.31□□□□□ -0.92
MED28-203ENST00000503945 OR10J5Q8NHC4 309 aa9.31□□□□□ -0.92
MED28-203ENST00000503945 FLYWCH2Q96CP2 140 aaKnown RBP9.31□□□□□ -0.92
MED28-203ENST00000503945 OR5B12Q96R08 314 aa9.31□□□□□ -0.92
MED28-203ENST00000503945 CLCC1Q96S66 551 aa9.31□□□□□ -0.92
MED28-203ENST00000503945 TSNAXQ99598 290 aaKnown RBP9.31□□□□□ -0.92
MED28-203ENST00000503945 PARP12Q9H0J9 701 aaKnown RBP9.31□□□□□ -0.92
MED28-203ENST00000503945 GAB2Q9UQC2 676 aa9.31□□□□□ -0.92
MED28-203ENST00000503945 NUBP2Q9Y5Y2 271 aa9.31□□□□□ -0.92
MED28-203ENST00000503945 A0A075B6Q4 140 aa9.3□□□□□ -0.92
MED28-203ENST00000503945 A0A1W2PN81 502 aa9.3□□□□□ -0.92
MED28-203ENST00000503945 FABP7O15540 132 aa9.3□□□□□ -0.92
MED28-203ENST00000503945 PROP1O75360 226 aa9.3□□□□□ -0.92
MED28-203ENST00000503945 OR8U9P0C7N5 309 aa9.3□□□□□ -0.92
MED28-203ENST00000503945 GSTT2P0CG29 244 aa9.3□□□□□ -0.92
MED28-203ENST00000503945 GSTT2BP0CG30 244 aa9.3□□□□□ -0.92
MED28-203ENST00000503945 GNB3P16520 340 aa9.3□□□□□ -0.92
MED28-203ENST00000503945 RAB3BP20337 219 aa9.3□□□□□ -0.92
MED28-203ENST00000503945 GALP22466 123 aa9.3□□□□□ -0.92
MED28-203ENST00000503945 CHRNA7P36544 502 aa9.3□□□□□ -0.92
MED28-203ENST00000503945 ECI1P42126 302 aa9.3□□□□□ -0.92
MED28-203ENST00000503945 INSL3P51460 131 aa9.3□□□□□ -0.92
MED28-203ENST00000503945 RUNX1Q01196 453 aa9.3□□□□□ -0.92
MED28-203ENST00000503945 ZNF616Q08AN1 781 aa9.3□□□□□ -0.92
MED28-203ENST00000503945 PSG5Q15238 335 aa9.3□□□□□ -0.92
MED28-203ENST00000503945 SSX1Q16384 188 aa9.3□□□□□ -0.92
MED28-203ENST00000503945 ECSCRQ19T08 205 aa9.3□□□□□ -0.92
MED28-203ENST00000503945 ACTBL2Q562R1 376 aa9.3□□□□□ -0.92
MED28-203ENST00000503945 PPP1R27Q86WC6 154 aa9.3□□□□□ -0.92
MED28-203ENST00000503945 MYOZ3Q8TDC0 251 aa9.3□□□□□ -0.92
MED28-203ENST00000503945 B9D2Q9BPU9 175 aa9.3□□□□□ -0.92
MED28-203ENST00000503945 NDUFB11Q9NX14 153 aa9.3□□□□□ -0.92
MED28-203ENST00000503945 METTL1Q9UBP6 276 aaKnown RBP9.3□□□□□ -0.92
MED28-203ENST00000503945 SCOCQ9UIL1 159 aa9.3□□□□□ -0.92
MED28-203ENST00000503945 FOXA2Q9Y261 457 aaPredicted RBP9.3□□□□□ -0.92
MED28-203ENST00000503945 KCNK7Q9Y2U2 307 aa9.3□□□□□ -0.92
MED28-203ENST00000503945 RBM7Q9Y580 266 aaKnown RBP9.3□□□□□ -0.92
MED28-203ENST00000503945 A3GALT2U3KPV4 340 aa9.3□□□□□ -0.92
MED28-203ENST00000503945 IGKV1-6A0A0C4DH72 117 aa9.29□□□□□ -0.92
MED28-203ENST00000503945 I3L521 148 aa9.29□□□□□ -0.92
MED28-203ENST00000503945 BET1O15155 118 aa9.29□□□□□ -0.92
MED28-203ENST00000503945 CNIH1O95406 144 aa9.29□□□□□ -0.92
MED28-203ENST00000503945 APOA2P02652 100 aa9.29□□□□□ -0.92
MED28-203ENST00000503945 RAB6AP20340 208 aa9.29□□□□□ -0.92
MED28-203ENST00000503945 LGALS7P47929 136 aa9.29□□□□□ -0.92
MED28-203ENST00000503945 LUMP51884 338 aaPredicted RBP9.29□□□□□ -0.92
MED28-203ENST00000503945 OR10A3P58181 314 aa9.29□□□□□ -0.92
MED28-203ENST00000503945 TAGLNQ01995 201 aaKnown RBP9.29□□□□□ -0.92
MED28-203ENST00000503945 ARFRP1Q13795 201 aa9.29□□□□□ -0.92
MED28-203ENST00000503945 ARL6IP1Q15041 203 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms