RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 CT45A1Q5HYN5 189 aa6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 TMEM268Q5VZI3 342 aa6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 GGNBP1Q5YKI7 109 aa6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 THOC7Q6I9Y2 204 aaKnown RBP6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 BTNL3Q6UXE8 466 aa6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 LYG1Q8N1E2 194 aa6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 ABHD12Q8N2K0 398 aa6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 BEND2Q8NDZ0 799 aa6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 OR10X1Q8NGY0 326 aa6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 CLDND2Q8NHS1 167 aa6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 CT45A3Q8NHU0 189 aa6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 TCTEX1D2Q8WW35 142 aa6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 LSM10Q969L4 123 aaKnown RBP6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 MBD6Q96DN6 1003 aa6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 ABHD14BQ96IU4 210 aa6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 AIFM2Q9BRQ8 373 aa6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 CHIAQ9BZP6 476 aa6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 PARP12Q9H0J9 701 aaKnown RBP6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 HEXA-AS1Q9H8Q6 139 aa6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 UNKLQ9H9P5 680 aaKnown RBP6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 CACFD1Q9UGQ2 172 aa6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 RNF150Q9ULK6 438 aa6.67□□□□□ -1.34
TOPBP1-202ENST00000503338 DOCK11Q5JSL3 2073 aa6.66□□□□□ -1.34
TOPBP1-202ENST00000503338 A0A1B0GU03 582 aa6.66□□□□□ -1.34
TOPBP1-202ENST00000503338 MEX3AA1L020 520 aaKnown RBP6.66□□□□□ -1.34
TOPBP1-202ENST00000503338 C22orf46C9J442 243 aa6.66□□□□□ -1.34
TOPBP1-202ENST00000503338 BOLA2-SMG1P6H3BVE0 249 aa6.66□□□□□ -1.34
TOPBP1-202ENST00000503338 M0R1X1 148 aa6.66□□□□□ -1.34
TOPBP1-202ENST00000503338 TXNL1O43396 289 aa6.66□□□□□ -1.34
TOPBP1-202ENST00000503338 MMP23AO75900 390 aa6.66□□□□□ -1.34
TOPBP1-202ENST00000503338 HPRT1P00492 218 aa6.66□□□□□ -1.34
TOPBP1-202ENST00000503338 RLN2P04090 185 aa6.66□□□□□ -1.34
TOPBP1-202ENST00000503338 HOXB5P09067 269 aa6.66□□□□□ -1.34
TOPBP1-202ENST00000503338 ZNF16P17020 682 aaPredicted RBP6.66□□□□□ -1.34
TOPBP1-202ENST00000503338 PRTN3P24158 256 aa6.66□□□□□ -1.34
TOPBP1-202ENST00000503338 GNG10P50151 68 aa6.66□□□□□ -1.34
TOPBP1-202ENST00000503338 ZNF134P52741 427 aa6.66□□□□□ -1.34
TOPBP1-202ENST00000503338 LMO4P61968 165 aa6.66□□□□□ -1.34
TOPBP1-202ENST00000503338 CD300CQ08708 224 aa6.66□□□□□ -1.34
TOPBP1-202ENST00000503338 SMCO1Q147U7 214 aa6.66□□□□□ -1.34
TOPBP1-202ENST00000503338 C2orf68Q2NKX9 166 aa6.66□□□□□ -1.34
TOPBP1-202ENST00000503338 NCR3LG1Q68D85 454 aa6.66□□□□□ -1.34
TOPBP1-202ENST00000503338 DHRS7BQ6IAN0 325 aaPredicted RBP6.66□□□□□ -1.34
TOPBP1-202ENST00000503338 PRSS57Q6UWY2 283 aa6.66□□□□□ -1.34
TOPBP1-202ENST00000503338 SELENOHQ8IZQ5 122 aaKnown RBP6.66□□□□□ -1.34
TOPBP1-202ENST00000503338 C11orf42Q8N5U0 333 aa6.66□□□□□ -1.34
TOPBP1-202ENST00000503338 SLC35G3Q8N808 338 aa6.66□□□□□ -1.34
TOPBP1-202ENST00000503338 OR4S2Q8NH73 311 aa6.66□□□□□ -1.34
TOPBP1-202ENST00000503338 RNASE11Q8TAA1 199 aaKnown RBP6.66□□□□□ -1.34
TOPBP1-202ENST00000503338 THAP6Q8TBB0 222 aa6.66□□□□□ -1.34
TOPBP1-202ENST00000503338 RRNAD1Q96FB5 475 aaKnown RBP6.66□□□□□ -1.34
TOPBP1-202ENST00000503338 PERPQ96FX8 193 aa6.66□□□□□ -1.34
TOPBP1-202ENST00000503338 PCGF1Q9BSM1 259 aa6.66□□□□□ -1.34
TOPBP1-202ENST00000503338 CLEC7AQ9BXN2 247 aa6.66□□□□□ -1.34
TOPBP1-202ENST00000503338 NARFLQ9H6Q4 476 aa6.66□□□□□ -1.34
TOPBP1-202ENST00000503338 PLEKHA2Q9HB19 425 aa6.66□□□□□ -1.34
TOPBP1-202ENST00000503338 ONECUT1Q9UBC0 465 aa6.66□□□□□ -1.34
TOPBP1-202ENST00000503338 SAA2-SAA4A0A096LPE2 208 aa6.65□□□□□ -1.34
TOPBP1-202ENST00000503338 IGHV2-26A0A0B4J1V2 119 aa6.65□□□□□ -1.34
TOPBP1-202ENST00000503338 IGHV2-70DA0A0C4DH43 119 aa6.65□□□□□ -1.34
TOPBP1-202ENST00000503338 HMSDA8MTL9 139 aa6.65□□□□□ -1.34
TOPBP1-202ENST00000503338 KIAA1324LA8MWY0 1029 aaPredicted RBP6.65□□□□□ -1.34
TOPBP1-202ENST00000503338 CCSO14618 274 aa6.65□□□□□ -1.34
TOPBP1-202ENST00000503338 SLC31A2O15432 143 aa6.65□□□□□ -1.34
TOPBP1-202ENST00000503338 ADAP1O75689 374 aa6.65□□□□□ -1.34
TOPBP1-202ENST00000503338 SIX6O95475 246 aa6.65□□□□□ -1.34
TOPBP1-202ENST00000503338 APOA2P02652 100 aa6.65□□□□□ -1.34
TOPBP1-202ENST00000503338 SAA2P0DJI9 122 aaPredicted RBP6.65□□□□□ -1.34
TOPBP1-202ENST00000503338 SLC25A4P12235 298 aa6.65□□□□□ -1.34
TOPBP1-202ENST00000503338 PSMB6P28072 239 aa6.65□□□□□ -1.34
TOPBP1-202ENST00000503338 CEACAM3P40198 252 aa6.65□□□□□ -1.34
TOPBP1-202ENST00000503338 AKR1C2P52895 323 aa6.65□□□□□ -1.34
TOPBP1-202ENST00000503338 ERVK-16P61578 105 aa6.65□□□□□ -1.34
TOPBP1-202ENST00000503338 RTL8BQ17RB0 113 aa6.65□□□□□ -1.34
TOPBP1-202ENST00000503338 CLEC12BQ2HXU8 276 aa6.65□□□□□ -1.34
TOPBP1-202ENST00000503338 IAH1Q2TAA2 248 aaPredicted RBP6.65□□□□□ -1.34
TOPBP1-202ENST00000503338 HLA-DRB5Q30154 266 aa6.65□□□□□ -1.34
TOPBP1-202ENST00000503338 DEFB113Q30KQ7 82 aa6.65□□□□□ -1.34
TOPBP1-202ENST00000503338 DCAF12L2Q5VW00 463 aa6.65□□□□□ -1.34
TOPBP1-202ENST00000503338 C11orf87Q6NUJ2 197 aa6.65□□□□□ -1.34
TOPBP1-202ENST00000503338 ZNF833PQ6ZTB9 187 aa6.65□□□□□ -1.34
TOPBP1-202ENST00000503338 ODF3L1Q8IXM7 274 aa6.65□□□□□ -1.34
TOPBP1-202ENST00000503338 SPAG16Q8N0X2 631 aa6.65□□□□□ -1.34
TOPBP1-202ENST00000503338 PPP1R1CQ8WVI7 109 aa6.65□□□□□ -1.34
TOPBP1-202ENST00000503338 UBR5O95071 2799 aaPredicted RBP6.65□□□□□ -1.35
TOPBP1-202ENST00000503338 ARID1AO14497 2285 aa6.64□□□□□ -1.35
TOPBP1-202ENST00000503338 LRRK2Q5S007 2527 aa6.64□□□□□ -1.35
TOPBP1-202ENST00000503338 FAM90A9PA6NNJ1 464 aa6.64□□□□□ -1.35
TOPBP1-202ENST00000503338 LY86O95711 162 aa6.64□□□□□ -1.35
TOPBP1-202ENST00000503338 HRASP01112 189 aa6.64□□□□□ -1.35
TOPBP1-202ENST00000503338 IGHV3-7P01780 117 aa6.64□□□□□ -1.35
TOPBP1-202ENST00000503338 NQO2P16083 231 aa6.64□□□□□ -1.35
TOPBP1-202ENST00000503338 EPHA1P21709 976 aa6.64□□□□□ -1.35
TOPBP1-202ENST00000503338 USF1P22415 310 aaPredicted RBP6.64□□□□□ -1.35
TOPBP1-202ENST00000503338 GATA3P23771 443 aa6.64□□□□□ -1.35
TOPBP1-202ENST00000503338 COL8A1P27658 744 aa6.64□□□□□ -1.35
TOPBP1-202ENST00000503338 MC5RP33032 325 aa6.64□□□□□ -1.35
TOPBP1-202ENST00000503338 NUP62P37198 522 aaPredicted RBP6.64□□□□□ -1.35
TOPBP1-202ENST00000503338 LPAR6P43657 344 aa6.64□□□□□ -1.35
TOPBP1-202ENST00000503338 RAB13P51153 203 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms