RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 PLAC9Q5JTB6 97 aa12.66□□□□□ -0.38
SCLT1-204ENST00000503215 ASPHD1Q5U4P2 390 aa12.66□□□□□ -0.38
SCLT1-204ENST00000503215 LIN54Q6MZP7 749 aa12.66□□□□□ -0.38
SCLT1-204ENST00000503215 CLVS1Q8IUQ0 354 aaPredicted RBP12.66□□□□□ -0.38
SCLT1-204ENST00000503215 OR8U1Q8NH10 309 aa12.66□□□□□ -0.38
SCLT1-204ENST00000503215 CASTOR1Q8WTX7 329 aa12.66□□□□□ -0.38
SCLT1-204ENST00000503215 C4orf3Q8WVX3 66 aa12.66□□□□□ -0.38
SCLT1-204ENST00000503215 DPF1Q92782 380 aa12.66□□□□□ -0.38
SCLT1-204ENST00000503215 MGLLQ99685 303 aa12.66□□□□□ -0.38
SCLT1-204ENST00000503215 GPR61Q9BZJ8 451 aa12.66□□□□□ -0.38
SCLT1-204ENST00000503215 FBXL15Q9H469 300 aa12.66□□□□□ -0.38
SCLT1-204ENST00000503215 ISYNA1Q9NPH2 558 aa12.66□□□□□ -0.38
SCLT1-204ENST00000503215 ZNF580Q9UK33 172 aa12.66□□□□□ -0.38
SCLT1-204ENST00000503215 IGKV1-6A0A0C4DH72 117 aa12.65□□□□□ -0.38
SCLT1-204ENST00000503215 SHISA3A0PJX4 238 aa12.65□□□□□ -0.38
SCLT1-204ENST00000503215 H0YJW9 148 aa12.65□□□□□ -0.38
SCLT1-204ENST00000503215 RAB29O14966 203 aa12.65□□□□□ -0.38
SCLT1-204ENST00000503215 LDLRAD4O15165 306 aa12.65□□□□□ -0.38
SCLT1-204ENST00000503215 NDUFA3O95167 84 aa12.65□□□□□ -0.38
SCLT1-204ENST00000503215 IGLV1-40P01703 118 aa12.65□□□□□ -0.38
SCLT1-204ENST00000503215 S100A1P23297 94 aa12.65□□□□□ -0.38
SCLT1-204ENST00000503215 CEACAM6P40199 344 aa12.65□□□□□ -0.38
SCLT1-204ENST00000503215 SSX1Q16384 188 aa12.65□□□□□ -0.38
SCLT1-204ENST00000503215 PRSS48Q7RTY5 328 aa12.65□□□□□ -0.38
SCLT1-204ENST00000503215 FAM3DQ96BQ1 224 aa12.65□□□□□ -0.38
SCLT1-204ENST00000503215 URM1Q9BTM9 101 aaKnown RBP12.65□□□□□ -0.38
SCLT1-204ENST00000503215 PECRQ9BY49 303 aa12.65□□□□□ -0.38
SCLT1-204ENST00000503215 Q9N2K0 584 aa12.65□□□□□ -0.38
SCLT1-204ENST00000503215 TRAV41A0A0B4J266 112 aa12.64□□□□□ -0.39
SCLT1-204ENST00000503215 SOX15O60248 233 aa12.64□□□□□ -0.39
SCLT1-204ENST00000503215 EGR2P11161 476 aaPredicted RBP12.64□□□□□ -0.39
SCLT1-204ENST00000503215 OR10A3P58181 314 aa12.64□□□□□ -0.39
SCLT1-204ENST00000503215 GNB1P62873 340 aa12.64□□□□□ -0.39
SCLT1-204ENST00000503215 HLA-DRB3P79483 266 aa12.64□□□□□ -0.39
SCLT1-204ENST00000503215 DGCR2P98153 550 aa12.64□□□□□ -0.39
SCLT1-204ENST00000503215 FHL3Q13643 280 aa12.64□□□□□ -0.39
SCLT1-204ENST00000503215 RGS21Q2M5E4 152 aa12.64□□□□□ -0.39
SCLT1-204ENST00000503215 C19orf54Q5BKX5 351 aa12.64□□□□□ -0.39
SCLT1-204ENST00000503215 HES5Q5TA89 166 aa12.64□□□□□ -0.39
SCLT1-204ENST00000503215 ZNF491Q8N8L2 437 aa12.64□□□□□ -0.39
SCLT1-204ENST00000503215 OR11H1Q8NG94 326 aa12.64□□□□□ -0.39
SCLT1-204ENST00000503215 RAB2BQ8WUD1 216 aa12.64□□□□□ -0.39
SCLT1-204ENST00000503215 PIPOXQ9P0Z9 390 aa12.64□□□□□ -0.39
SCLT1-204ENST00000503215 HSF4Q9ULV5 492 aa12.64□□□□□ -0.39
SCLT1-204ENST00000503215 GAB2Q9UQC2 676 aa12.64□□□□□ -0.39
SCLT1-204ENST00000503215 KCNK7Q9Y2U2 307 aa12.64□□□□□ -0.39
SCLT1-204ENST00000503215 TMEM272A0A1B0GTI8 110 aa12.63□□□□□ -0.39
SCLT1-204ENST00000503215 I3L521 148 aa12.63□□□□□ -0.39
SCLT1-204ENST00000503215 RRHO14718 337 aa12.63□□□□□ -0.39
SCLT1-204ENST00000503215 ARL6IP5O75915 188 aa12.63□□□□□ -0.39
SCLT1-204ENST00000503215 CD3GP09693 182 aa12.63□□□□□ -0.39
SCLT1-204ENST00000503215 CX3CL1P78423 397 aa12.63□□□□□ -0.39
SCLT1-204ENST00000503215 MOGAT2Q3SYC2 334 aa12.63□□□□□ -0.39
SCLT1-204ENST00000503215 FAM71F2Q6NXP2 309 aa12.63□□□□□ -0.39
SCLT1-204ENST00000503215 MOB1BQ7L9L4 216 aa12.63□□□□□ -0.39
SCLT1-204ENST00000503215 OR5M8Q8NGP6 311 aa12.63□□□□□ -0.39
SCLT1-204ENST00000503215 S100ZQ8WXG8 99 aa12.63□□□□□ -0.39
SCLT1-204ENST00000503215 PRR25Q96S07 402 aa12.63□□□□□ -0.39
SCLT1-204ENST00000503215 ALX4Q9H161 411 aaPredicted RBP12.63□□□□□ -0.39
SCLT1-204ENST00000503215 RIMS4Q9H426 269 aaPredicted RBP12.63□□□□□ -0.39
SCLT1-204ENST00000503215 A3GALT2U3KPV4 340 aa12.63□□□□□ -0.39
SCLT1-204ENST00000503215 V9GY05 133 aa12.63□□□□□ -0.39
SCLT1-204ENST00000503215 A0A0B4J203 849 aa12.62□□□□□ -0.39
SCLT1-204ENST00000503215 SEC14L6B5MCN3 397 aa12.62□□□□□ -0.39
SCLT1-204ENST00000503215 H3BMQ9 156 aa12.62□□□□□ -0.39
SCLT1-204ENST00000503215 HSPA12AO43301 675 aa12.62□□□□□ -0.39
SCLT1-204ENST00000503215 OR5H8P0DN80 308 aa12.62□□□□□ -0.39
SCLT1-204ENST00000503215 RAB9AP51151 201 aa12.62□□□□□ -0.39
SCLT1-204ENST00000503215 TRAM1Q15629 374 aa12.62□□□□□ -0.39
SCLT1-204ENST00000503215 ECSCRQ19T08 205 aa12.62□□□□□ -0.39
SCLT1-204ENST00000503215 VAX1Q5SQQ9 334 aa12.62□□□□□ -0.39
SCLT1-204ENST00000503215 TMEM65Q6PI78 240 aa12.62□□□□□ -0.39
SCLT1-204ENST00000503215 CENPSQ8N2Z9 138 aa12.62□□□□□ -0.39
SCLT1-204ENST00000503215 ZNF383Q8NA42 475 aa12.62□□□□□ -0.39
SCLT1-204ENST00000503215 OR5AN1Q8NGI8 311 aa12.62□□□□□ -0.39
SCLT1-204ENST00000503215 OR1N2Q8NGR9 330 aa12.62□□□□□ -0.39
SCLT1-204ENST00000503215 UBE2E2Q96LR5 201 aa12.62□□□□□ -0.39
SCLT1-204ENST00000503215 CLCC1Q96S66 551 aa12.62□□□□□ -0.39
SCLT1-204ENST00000503215 CMSS1Q9BQ75 279 aaKnown RBP12.62□□□□□ -0.39
SCLT1-204ENST00000503215 WDR12Q9GZL7 423 aaKnown RBP12.62□□□□□ -0.39
SCLT1-204ENST00000503215 C12orf4Q9NQ89 552 aa12.62□□□□□ -0.39
SCLT1-204ENST00000503215 KIAA1456Q9P272 454 aa12.62□□□□□ -0.39
SCLT1-204ENST00000503215 H7C2Y5 167 aa12.61□□□□□ -0.39
SCLT1-204ENST00000503215 ITGB1BP1O14713 200 aa12.61□□□□□ -0.39
SCLT1-204ENST00000503215 GSTP1P09211 210 aaKnown RBP12.61□□□□□ -0.39
SCLT1-204ENST00000503215 ZBTB25P24278 435 aa12.61□□□□□ -0.39
SCLT1-204ENST00000503215 PSMA1P25786 263 aaKnown RBP12.61□□□□□ -0.39
SCLT1-204ENST00000503215 ECI1P42126 302 aa12.61□□□□□ -0.39
SCLT1-204ENST00000503215 CD69Q07108 199 aa12.61□□□□□ -0.39
SCLT1-204ENST00000503215 PTX4Q96A99 478 aa12.61□□□□□ -0.39
SCLT1-204ENST00000503215 B9D2Q9BPU9 175 aa12.61□□□□□ -0.39
SCLT1-204ENST00000503215 NEURL2Q9BR09 285 aa12.61□□□□□ -0.39
SCLT1-204ENST00000503215 FAM103A1Q9BTL3 118 aaKnown RBP12.61□□□□□ -0.39
SCLT1-204ENST00000503215 ACOT13Q9NPJ3 140 aa12.61□□□□□ -0.39
SCLT1-204ENST00000503215 VSIG4Q9Y279 399 aa12.61□□□□□ -0.39
SCLT1-204ENST00000503215 WASHC3Q9Y3C0 194 aa12.61□□□□□ -0.39
SCLT1-204ENST00000503215 OR5H14A6NHG9 310 aa12.6□□□□□ -0.39
SCLT1-204ENST00000503215 TRDCB7Z8K6 153 aa12.6□□□□□ -0.39
SCLT1-204ENST00000503215 IGKV1-16P04430 117 aa12.6□□□□□ -0.39
SCLT1-204ENST00000503215 ZNF846Q147U1 533 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms