RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 SSX1Q16384 188 aa4.68□□□□□ -1.66
LSM3P4-201ENST00000502948 GLT8D1Q68CQ7 371 aa4.68□□□□□ -1.66
LSM3P4-201ENST00000502948 LINC00322Q6ZN03 302 aaPredicted RBP4.68□□□□□ -1.66
LSM3P4-201ENST00000502948 PPP1R27Q86WC6 154 aa4.68□□□□□ -1.66
LSM3P4-201ENST00000502948 SGPP2Q8IWX5 399 aa4.68□□□□□ -1.66
LSM3P4-201ENST00000502948 PRR18Q8N4B5 295 aa4.68□□□□□ -1.66
LSM3P4-201ENST00000502948 NANOGP1Q8N7R0 232 aa4.68□□□□□ -1.66
LSM3P4-201ENST00000502948 OR13C5Q8NGS8 318 aa4.68□□□□□ -1.66
LSM3P4-201ENST00000502948 UBALD1Q8TB05 177 aa4.68□□□□□ -1.66
LSM3P4-201ENST00000502948 FBLIM1Q8WUP2 373 aa4.68□□□□□ -1.66
LSM3P4-201ENST00000502948 GGHQ92820 318 aa4.68□□□□□ -1.66
LSM3P4-201ENST00000502948 ORAI1Q96D31 301 aa4.68□□□□□ -1.66
LSM3P4-201ENST00000502948 USMG5Q96IX5 58 aa4.68□□□□□ -1.66
LSM3P4-201ENST00000502948 NEDD4LQ96PU5 975 aa4.68□□□□□ -1.66
LSM3P4-201ENST00000502948 TSNAXQ99598 290 aaKnown RBP4.68□□□□□ -1.66
LSM3P4-201ENST00000502948 THAP7Q9BT49 309 aaPredicted RBP4.68□□□□□ -1.66
LSM3P4-201ENST00000502948 TMEM59Q9BXS4 323 aa4.68□□□□□ -1.66
LSM3P4-201ENST00000502948 BANF2Q9H503 90 aa4.68□□□□□ -1.66
LSM3P4-201ENST00000502948 PALMDQ9NP74 551 aa4.68□□□□□ -1.66
LSM3P4-201ENST00000502948 CLEC2DQ9UHP7 191 aa4.68□□□□□ -1.66
LSM3P4-201ENST00000502948 STARD9Q9P2P6 4700 aa4.67□□□□□ -1.66
LSM3P4-201ENST00000502948 TRIM64CA6NLI5 447 aa4.67□□□□□ -1.66
LSM3P4-201ENST00000502948 FOXI3A8MTJ6 420 aaPredicted RBP4.67□□□□□ -1.66
LSM3P4-201ENST00000502948 FCN1O00602 326 aa4.67□□□□□ -1.66
LSM3P4-201ENST00000502948 AIREO43918 545 aa4.67□□□□□ -1.66
LSM3P4-201ENST00000502948 CRYGBP07316 175 aa4.67□□□□□ -1.66
LSM3P4-201ENST00000502948 GSTP1P09211 210 aaKnown RBP4.67□□□□□ -1.66
LSM3P4-201ENST00000502948 SRMP19623 302 aa4.67□□□□□ -1.66
LSM3P4-201ENST00000502948 CELP19835 753 aa4.67□□□□□ -1.66
LSM3P4-201ENST00000502948 HTR2CP28335 458 aa4.67□□□□□ -1.66
LSM3P4-201ENST00000502948 PSG5Q15238 335 aa4.67□□□□□ -1.66
LSM3P4-201ENST00000502948 SRSF7Q16629 238 aaKnown RBP eCLIP4.67□□□□□ -1.66
LSM3P4-201ENST00000502948 TATDN3Q17R31 274 aa4.67□□□□□ -1.66
LSM3P4-201ENST00000502948 ECSCRQ19T08 205 aa4.67□□□□□ -1.66
LSM3P4-201ENST00000502948 ZNF343Q6P1L6 599 aa4.67□□□□□ -1.66
LSM3P4-201ENST00000502948 UNQ5815/PRO19632Q6UWF5 114 aa4.67□□□□□ -1.66
LSM3P4-201ENST00000502948 FAM131AQ6UXB0 335 aa4.67□□□□□ -1.66
LSM3P4-201ENST00000502948 IL34Q6ZMJ4 242 aa4.67□□□□□ -1.66
LSM3P4-201ENST00000502948 LRRTM1Q86UE6 522 aa4.67□□□□□ -1.66
LSM3P4-201ENST00000502948 ANKRD13BQ86YJ7 626 aa4.67□□□□□ -1.66
LSM3P4-201ENST00000502948 Q8N402 240 aa4.67□□□□□ -1.66
LSM3P4-201ENST00000502948 POC5Q8NA72 575 aa4.67□□□□□ -1.66
LSM3P4-201ENST00000502948 LFNGQ8NES3 379 aa4.67□□□□□ -1.66
LSM3P4-201ENST00000502948 OR6M1Q8NGM8 313 aa4.67□□□□□ -1.66
LSM3P4-201ENST00000502948 OR9G4Q8NGQ1 327 aa4.67□□□□□ -1.66
LSM3P4-201ENST00000502948 ARPC1AQ92747 370 aa4.67□□□□□ -1.66
LSM3P4-201ENST00000502948 URM1Q9BTM9 101 aaKnown RBP4.67□□□□□ -1.66
LSM3P4-201ENST00000502948 C11orf54Q9H0W9 315 aaPredicted RBP4.67□□□□□ -1.66
LSM3P4-201ENST00000502948 ALX4Q9H161 411 aaPredicted RBP4.67□□□□□ -1.66
LSM3P4-201ENST00000502948 FBXL15Q9H469 300 aa4.67□□□□□ -1.66
LSM3P4-201ENST00000502948 FKBP14Q9NWM8 211 aa4.67□□□□□ -1.66
LSM3P4-201ENST00000502948 METTL1Q9UBP6 276 aaKnown RBP4.67□□□□□ -1.66
LSM3P4-201ENST00000502948 PSORS1C1Q9UIG5 152 aa4.67□□□□□ -1.66
LSM3P4-201ENST00000502948 EPPK1P58107 5090 aaKnown RBP4.67□□□□□ -1.66
LSM3P4-201ENST00000502948 TENM2Q9NT68 2774 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 BIRC6Q9NR09 4857 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 C13orf42A0A1B0GVH6 325 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 H7C2Y5 167 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 MYL12BO14950 172 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 ST8SIA5O15466 376 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 OR2A4O95047 310 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 BAG2O95816 211 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 CA2P00918 260 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 IGLV2-23P01705 113 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 TRGV3P03979 118 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 IFNA6P05013 189 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 CDK1P06493 297 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 UCHL1P09936 223 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 RRASP10301 218 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 CPEP16870 476 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 CEACAM6P40199 344 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 TPPP2P59282 170 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 HLA-DRB3P79483 266 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 SSBP2P81877 361 aaPredicted RBP4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 UNC119Q13432 240 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 FXYD3Q14802 87 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 PLGLAQ15195 96 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 TRAM1Q15629 374 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 KLK9Q2XQG4 91 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 ACSM3Q53FZ2 586 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 TMEM177Q53S58 311 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 RPL39P5Q59GN2 51 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 LCN12Q6JVE5 192 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 Q6ZS49 121 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 OVCH2Q7RTZ1 564 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 C6orf201Q7Z4U5 140 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 DHRSXQ8N5I4 330 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 ZNF383Q8NA42 475 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 OR4A4PQ8NGN8 299 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 CYGBQ8WWM9 190 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 OR5B12Q96R08 314 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 FAAP24Q9BTP7 215 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 MND1Q9BWT6 205 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 TINAGL1Q9GZM7 467 aaPredicted RBP4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 LPAR5Q9H1C0 372 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 Q9N2K0 584 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 C12orf4Q9NQ89 552 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 PLEKHJ1Q9NW61 149 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 KLK9Q9UKQ9 250 aa4.66□□□□□ -1.66
LSM3P4-201ENST00000502948 A0A1W2PPK0 400 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms