RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 MOGAT2Q3SYC2 334 aa6.86□□□□□ -1.31
CCDC171-209ENST00000498725 XAF1Q6GPH4 301 aa6.86□□□□□ -1.31
CCDC171-209ENST00000498725 ZNF343Q6P1L6 599 aa6.86□□□□□ -1.31
CCDC171-209ENST00000498725 SYS1Q8N2H4 156 aa6.86□□□□□ -1.31
CCDC171-209ENST00000498725 OR2K2Q8NGT1 345 aa6.86□□□□□ -1.31
CCDC171-209ENST00000498725 GPR148Q8TDV2 347 aa6.86□□□□□ -1.31
CCDC171-209ENST00000498725 FAM46BQ96A09 425 aa6.86□□□□□ -1.31
CCDC171-209ENST00000498725 TSNAXQ99598 290 aaKnown RBP6.86□□□□□ -1.31
CCDC171-209ENST00000498725 ERVK13-1Q9NX77 482 aa6.86□□□□□ -1.31
CCDC171-209ENST00000498725 PIPOXQ9P0Z9 390 aa6.86□□□□□ -1.31
CCDC171-209ENST00000498725 ABRACLQ9P1F3 81 aa6.86□□□□□ -1.31
CCDC171-209ENST00000498725 STEAP1Q9UHE8 339 aa6.86□□□□□ -1.31
CCDC171-209ENST00000498725 OAZ3Q9UMX2 235 aa6.86□□□□□ -1.31
CCDC171-209ENST00000498725 KLK5Q9Y337 293 aaPredicted RBP6.86□□□□□ -1.31
CCDC171-209ENST00000498725 A0A1W2PPK0 400 aa6.85□□□□□ -1.31
CCDC171-209ENST00000498725 RAB29O14966 203 aa6.85□□□□□ -1.31
CCDC171-209ENST00000498725 RBMXL2O75526 392 aaKnown RBP6.85□□□□□ -1.31
CCDC171-209ENST00000498725 RBBP9O75884 186 aa6.85□□□□□ -1.31
CCDC171-209ENST00000498725 OR2A4O95047 310 aa6.85□□□□□ -1.31
CCDC171-209ENST00000498725 PRH1P02810 166 aa6.85□□□□□ -1.31
CCDC171-209ENST00000498725 IGKV1-16P04430 117 aa6.85□□□□□ -1.31
CCDC171-209ENST00000498725 MGMTP16455 207 aa6.85□□□□□ -1.31
CCDC171-209ENST00000498725 FUT3P21217 361 aa6.85□□□□□ -1.31
CCDC171-209ENST00000498725 AADACP22760 399 aa6.85□□□□□ -1.31
CCDC171-209ENST00000498725 LGALS7P47929 136 aa6.85□□□□□ -1.31
CCDC171-209ENST00000498725 MECP2P51608 486 aaKnown RBP6.85□□□□□ -1.31
CCDC171-209ENST00000498725 GPR176Q14439 515 aa6.85□□□□□ -1.31
CCDC171-209ENST00000498725 AWAT2Q6E213 333 aa6.85□□□□□ -1.31
CCDC171-209ENST00000498725 SIGIRRQ6IA17 410 aa6.85□□□□□ -1.31
CCDC171-209ENST00000498725 LYG2Q86SG7 212 aa6.85□□□□□ -1.31
CCDC171-209ENST00000498725 GAPTQ8N292 157 aa6.85□□□□□ -1.31
CCDC171-209ENST00000498725 GHSRQ92847 366 aa6.85□□□□□ -1.31
CCDC171-209ENST00000498725 SNAPC3Q92966 411 aa6.85□□□□□ -1.31
CCDC171-209ENST00000498725 PHB2Q99623 299 aa6.85□□□□□ -1.31
CCDC171-209ENST00000498725 GGTLC1Q9BX51 225 aa6.85□□□□□ -1.31
CCDC171-209ENST00000498725 TINAGL1Q9GZM7 467 aaPredicted RBP6.85□□□□□ -1.31
CCDC171-209ENST00000498725 CHMP1AQ9HD42 196 aaPredicted RBP6.85□□□□□ -1.31
CCDC171-209ENST00000498725 MBNL3Q9NUK0 354 aaKnown RBP6.85□□□□□ -1.31
CCDC171-209ENST00000498725 HECTD4Q9Y4D8 3996 aa6.84□□□□□ -1.31
CCDC171-209ENST00000498725 TRAV8-7A0A075B6U6 113 aa6.84□□□□□ -1.31
CCDC171-209ENST00000498725 H3BUA1 57 aa6.84□□□□□ -1.31
CCDC171-209ENST00000498725 BMPR1BO00238 502 aa6.84□□□□□ -1.31
CCDC171-209ENST00000498725 GPX5O75715 221 aa6.84□□□□□ -1.31
CCDC171-209ENST00000498725 SC5DO75845 299 aa6.84□□□□□ -1.31
CCDC171-209ENST00000498725 HLA-AP01891 365 aaKnown RBP6.84□□□□□ -1.31
CCDC171-209ENST00000498725 SNRPGP62308 76 aaKnown RBP6.84□□□□□ -1.31
CCDC171-209ENST00000498725 SSBP2P81877 361 aaPredicted RBP6.84□□□□□ -1.31
CCDC171-209ENST00000498725 EXOSC2Q13868 293 aaKnown RBP6.84□□□□□ -1.31
CCDC171-209ENST00000498725 DEFB114Q30KQ6 69 aa6.84□□□□□ -1.31
CCDC171-209ENST00000498725 MEDAGQ5VYS4 303 aa6.84□□□□□ -1.31
CCDC171-209ENST00000498725 FAM71F2Q6NXP2 309 aa6.84□□□□□ -1.31
CCDC171-209ENST00000498725 LAX1Q8IWV1 398 aa6.84□□□□□ -1.31
CCDC171-209ENST00000498725 CCDC197Q8NCU1 140 aa6.84□□□□□ -1.31
CCDC171-209ENST00000498725 OR52B4Q8NGK2 314 aa6.84□□□□□ -1.31
CCDC171-209ENST00000498725 OR52I1Q8NGK6 324 aa6.84□□□□□ -1.31
CCDC171-209ENST00000498725 TRUB1Q8WWH5 349 aaKnown RBP6.84□□□□□ -1.31
CCDC171-209ENST00000498725 CACNG8Q8WXS5 425 aa6.84□□□□□ -1.31
CCDC171-209ENST00000498725 MYCBPQ99417 103 aaPredicted RBP6.84□□□□□ -1.31
CCDC171-209ENST00000498725 FAAP24Q9BTP7 215 aa6.84□□□□□ -1.31
CCDC171-209ENST00000498725 OR1A1Q9P1Q5 309 aa6.84□□□□□ -1.31
CCDC171-209ENST00000498725 AP4S1Q9Y587 144 aa6.84□□□□□ -1.31
CCDC171-209ENST00000498725 LOC102724200A0A096LPH7 203 aaPredicted RBP6.83□□□□□ -1.32
CCDC171-209ENST00000498725 SNTNA6NMZ2 147 aa6.83□□□□□ -1.32
CCDC171-209ENST00000498725 FAM90A23PA8MXZ1 464 aa6.83□□□□□ -1.32
CCDC171-209ENST00000498725 PPP5D1E7EU14 171 aa6.83□□□□□ -1.32
CCDC171-209ENST00000498725 MPPED1O15442 326 aa6.83□□□□□ -1.32
CCDC171-209ENST00000498725 AIREO43918 545 aa6.83□□□□□ -1.32
CCDC171-209ENST00000498725 PDCD6O75340 191 aa6.83□□□□□ -1.32
CCDC171-209ENST00000498725 CA11O75493 328 aa6.83□□□□□ -1.32
CCDC171-209ENST00000498725 SCAF4O95104 1147 aaKnown RBP6.83□□□□□ -1.32
CCDC171-209ENST00000498725 APOA2P02652 100 aa6.83□□□□□ -1.32
CCDC171-209ENST00000498725 FOLR2P14207 255 aa6.83□□□□□ -1.32
CCDC171-209ENST00000498725 MRPL28Q13084 256 aaKnown RBP6.83□□□□□ -1.32
CCDC171-209ENST00000498725 HMGN3Q15651 99 aa6.83□□□□□ -1.32
CCDC171-209ENST00000498725 DEFB135Q30KP9 77 aa6.83□□□□□ -1.32
CCDC171-209ENST00000498725 DNAL1Q4LDG9 190 aa6.83□□□□□ -1.32
CCDC171-209ENST00000498725 SLC16A13Q7RTY0 426 aa6.83□□□□□ -1.32
CCDC171-209ENST00000498725 ZNF383Q8NA42 475 aa6.83□□□□□ -1.32
CCDC171-209ENST00000498725 OR5AN1Q8NGI8 311 aa6.83□□□□□ -1.32
CCDC171-209ENST00000498725 Q96M66 194 aa6.83□□□□□ -1.32
CCDC171-209ENST00000498725 SULT4A1Q9BR01 284 aa6.83□□□□□ -1.32
CCDC171-209ENST00000498725 PGPEP1Q9NXJ5 209 aa6.83□□□□□ -1.32
CCDC171-209ENST00000498725 CKLFQ9UBR5 152 aa6.83□□□□□ -1.32
CCDC171-209ENST00000498725 ORC6Q9Y5N6 252 aa6.83□□□□□ -1.32
CCDC171-209ENST00000498725 KMT2AQ03164 3969 aa6.83□□□□□ -1.32
CCDC171-209ENST00000498725 DNAH10Q8IVF4 4471 aa6.82□□□□□ -1.32
CCDC171-209ENST00000498725 MSGN1A6NI15 193 aa6.82□□□□□ -1.32
CCDC171-209ENST00000498725 C2orf70A6NJV1 201 aa6.82□□□□□ -1.32
CCDC171-209ENST00000498725 SPRY2O43597 315 aa6.82□□□□□ -1.32
CCDC171-209ENST00000498725 SPDEFO95238 335 aa6.82□□□□□ -1.32
CCDC171-209ENST00000498725 GLAP06280 429 aa6.82□□□□□ -1.32
CCDC171-209ENST00000498725 IGFBP3P17936 291 aaPredicted RBP6.82□□□□□ -1.32
CCDC171-209ENST00000498725 CEACAM6P40199 344 aa6.82□□□□□ -1.32
CCDC171-209ENST00000498725 KIR2DS2P43631 304 aa6.82□□□□□ -1.32
CCDC171-209ENST00000498725 RHOGP84095 191 aa6.82□□□□□ -1.32
CCDC171-209ENST00000498725 ATP5G2Q06055 141 aa6.82□□□□□ -1.32
CCDC171-209ENST00000498725 TNXAQ16473 311 aa6.82□□□□□ -1.32
CCDC171-209ENST00000498725 LY6G6FQ5SQ64 297 aa6.82□□□□□ -1.32
CCDC171-209ENST00000498725 OR2G6Q5TZ20 316 aa6.82□□□□□ -1.32
CCDC171-209ENST00000498725 LGALS9CQ6DKI2 356 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms