RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 MKRN2OSH3BPM6 223 aa13.84□□□□□ -0.19
COL6A1-206ENST00000498614 ST8SIA5O15466 376 aa13.84□□□□□ -0.19
COL6A1-206ENST00000498614 ZNF737O75373 536 aa13.84□□□□□ -0.19
COL6A1-206ENST00000498614 GZMHP20718 246 aa13.84□□□□□ -0.19
COL6A1-206ENST00000498614 TUBG1P23258 451 aa13.84□□□□□ -0.19
COL6A1-206ENST00000498614 SLC10A1Q14973 349 aa13.84□□□□□ -0.19
COL6A1-206ENST00000498614 LILRB2Q8N423 598 aa13.84□□□□□ -0.19
COL6A1-206ENST00000498614 MDS2Q8NDY4 140 aa13.84□□□□□ -0.19
COL6A1-206ENST00000498614 MISP3Q96FF7 219 aa13.84□□□□□ -0.19
COL6A1-206ENST00000498614 OR4C12Q96R67 309 aa13.84□□□□□ -0.19
COL6A1-206ENST00000498614 OR1A1Q9P1Q5 309 aa13.84□□□□□ -0.19
COL6A1-206ENST00000498614 NAT8Q9UHE5 227 aa13.84□□□□□ -0.19
COL6A1-206ENST00000498614 KLRC4-KLRK1H3BQV0 150 aa13.83□□□□□ -0.19
COL6A1-206ENST00000498614 RHBDL1O75783 438 aa13.83□□□□□ -0.19
COL6A1-206ENST00000498614 ERVS71-1P61550 626 aa13.83□□□□□ -0.19
COL6A1-206ENST00000498614 SERF2P84101 59 aa13.83□□□□□ -0.19
COL6A1-206ENST00000498614 HNF4GQ14541 408 aa13.83□□□□□ -0.19
COL6A1-206ENST00000498614 P2RY6Q15077 328 aa13.83□□□□□ -0.19
COL6A1-206ENST00000498614 MDP1Q86V88 176 aa13.83□□□□□ -0.19
COL6A1-206ENST00000498614 MYPOPQ86VE0 399 aaPredicted RBP13.83□□□□□ -0.19
COL6A1-206ENST00000498614 RNASEH2CQ8TDP1 164 aaKnown RBP13.83□□□□□ -0.19
COL6A1-206ENST00000498614 IL1F10Q8WWZ1 152 aa13.83□□□□□ -0.19
COL6A1-206ENST00000498614 PYGO2Q9BRQ0 406 aa13.83□□□□□ -0.19
COL6A1-206ENST00000498614 WDR61Q9GZS3 305 aaKnown RBP13.83□□□□□ -0.19
COL6A1-206ENST00000498614 TRAV24A0A0B4J272 114 aa13.83□□□□□ -0.2
COL6A1-206ENST00000498614 IFNA1P01562 189 aa13.83□□□□□ -0.2
COL6A1-206ENST00000498614 IGKV1D-33P01593 117 aa13.83□□□□□ -0.2
COL6A1-206ENST00000498614 IGKV1-33P01594 117 aa13.83□□□□□ -0.2
COL6A1-206ENST00000498614 IGLV2-14P01704 120 aa13.83□□□□□ -0.2
COL6A1-206ENST00000498614 FGF7P21781 194 aa13.83□□□□□ -0.2
COL6A1-206ENST00000498614 GNG3P63215 75 aa13.83□□□□□ -0.2
COL6A1-206ENST00000498614 CLEC12BQ2HXU8 276 aa13.83□□□□□ -0.2
COL6A1-206ENST00000498614 ZNF664Q8N3J9 261 aa13.83□□□□□ -0.2
COL6A1-206ENST00000498614 TRAV39A0A0B4J263 110 aa13.82□□□□□ -0.2
COL6A1-206ENST00000498614 XKRY2A2RUG3 117 aa13.82□□□□□ -0.2
COL6A1-206ENST00000498614 ARGFXA6NJG6 315 aa13.82□□□□□ -0.2
COL6A1-206ENST00000498614 SNRPCP09234 159 aaKnown RBP13.82□□□□□ -0.2
COL6A1-206ENST00000498614 TMEM241Q24JQ0 296 aa13.82□□□□□ -0.2
COL6A1-206ENST00000498614 ACSF3Q4G176 576 aaPredicted RBP13.82□□□□□ -0.2
COL6A1-206ENST00000498614 SPANXN5Q5MJ07 72 aa13.82□□□□□ -0.2
COL6A1-206ENST00000498614 CYP2G1PQ6ZSU1 146 aa13.82□□□□□ -0.2
COL6A1-206ENST00000498614 ZNF573Q86YE8 665 aa13.82□□□□□ -0.2
COL6A1-206ENST00000498614 FAM58AQ8N1B3 248 aa13.82□□□□□ -0.2
COL6A1-206ENST00000498614 LHX4Q969G2 390 aa13.82□□□□□ -0.2
COL6A1-206ENST00000498614 LSM10Q969L4 123 aaKnown RBP13.82□□□□□ -0.2
COL6A1-206ENST00000498614 RPUSD4Q96CM3 377 aaKnown RBP13.82□□□□□ -0.2
COL6A1-206ENST00000498614 AGMATQ9BSE5 352 aa13.82□□□□□ -0.2
COL6A1-206ENST00000498614 ELOVL1Q9BW60 279 aa13.82□□□□□ -0.2
COL6A1-206ENST00000498614 PPP1R3CQ9UQK1 317 aa13.82□□□□□ -0.2
COL6A1-206ENST00000498614 MPC1Q9Y5U8 109 aa13.82□□□□□ -0.2
COL6A1-206ENST00000498614 UBE2L5PA0A1B0GUS4 154 aa13.82□□□□□ -0.2
COL6A1-206ENST00000498614 A8MWP6 167 aa13.82□□□□□ -0.2
COL6A1-206ENST00000498614 HMGB3O15347 200 aaKnown RBP13.82□□□□□ -0.2
COL6A1-206ENST00000498614 HBG1P69891 147 aa13.82□□□□□ -0.2
COL6A1-206ENST00000498614 HBG2P69892 147 aa13.82□□□□□ -0.2
COL6A1-206ENST00000498614 RNFT1Q5M7Z0 435 aa13.82□□□□□ -0.2
COL6A1-206ENST00000498614 RPP25LQ8N5L8 163 aaKnown RBP13.82□□□□□ -0.2
COL6A1-206ENST00000498614 OR10V1Q8NGI7 309 aa13.82□□□□□ -0.2
COL6A1-206ENST00000498614 SPRR3Q9UBC9 169 aa13.82□□□□□ -0.2
COL6A1-206ENST00000498614 A0A1W2PR80 420 aa13.81□□□□□ -0.2
COL6A1-206ENST00000498614 FOSL1P15407 271 aa13.81□□□□□ -0.2
COL6A1-206ENST00000498614 WT1P19544 449 aaPredicted RBP13.81□□□□□ -0.2
COL6A1-206ENST00000498614 RPL23P62829 140 aaKnown RBP13.81□□□□□ -0.2
COL6A1-206ENST00000498614 MEF2BQ02080 365 aaPredicted RBP13.81□□□□□ -0.2
COL6A1-206ENST00000498614 RTP5Q14D33 572 aa13.81□□□□□ -0.2
COL6A1-206ENST00000498614 BSXQ3C1V8 233 aa13.81□□□□□ -0.2
COL6A1-206ENST00000498614 TAF15Q92804 592 aaKnown RBP eCLIP13.81□□□□□ -0.2
COL6A1-206ENST00000498614 BCL2L2Q92843 193 aaPredicted RBP13.81□□□□□ -0.2
COL6A1-206ENST00000498614 WDYHV1Q96HA8 205 aa13.81□□□□□ -0.2
COL6A1-206ENST00000498614 FER1L6-AS2Q96M78 137 aa13.81□□□□□ -0.2
COL6A1-206ENST00000498614 C2orf88Q9BSF0 95 aa13.81□□□□□ -0.2
COL6A1-206ENST00000498614 SCNM1Q9BWG6 230 aa13.81□□□□□ -0.2
COL6A1-206ENST00000498614 RIMS4Q9H426 269 aaPredicted RBP13.81□□□□□ -0.2
COL6A1-206ENST00000498614 URB1O60287 2271 aaKnown RBP13.81□□□□□ -0.2
COL6A1-206ENST00000498614 OR5B21A6NL26 309 aa13.81□□□□□ -0.2
COL6A1-206ENST00000498614 KBTBD11O94819 623 aa13.81□□□□□ -0.2
COL6A1-206ENST00000498614 CD46P15529 392 aa13.81□□□□□ -0.2
COL6A1-206ENST00000498614 ZNF16P17020 682 aaPredicted RBP13.81□□□□□ -0.2
COL6A1-206ENST00000498614 GALR1P47211 349 aa13.81□□□□□ -0.2
COL6A1-206ENST00000498614 ZNF585BQ52M93 769 aa13.81□□□□□ -0.2
COL6A1-206ENST00000498614 FBXW9Q5XUX1 488 aa13.81□□□□□ -0.2
COL6A1-206ENST00000498614 OR51G1Q8NGK1 321 aa13.81□□□□□ -0.2
COL6A1-206ENST00000498614 PINX1Q96BK5 328 aaKnown RBP13.81□□□□□ -0.2
COL6A1-206ENST00000498614 PCGF1Q9BSM1 259 aa13.81□□□□□ -0.2
COL6A1-206ENST00000498614 ACTR3CQ9C0K3 210 aaPredicted RBP13.81□□□□□ -0.2
COL6A1-206ENST00000498614 SLC39A9Q9NUM3 307 aa13.81□□□□□ -0.2
COL6A1-206ENST00000498614 ATMQ13315 3056 aa13.81□□□□□ -0.2
COL6A1-206ENST00000498614 TRBV6-6A0A0A6YYG2 114 aa13.8□□□□□ -0.2
COL6A1-206ENST00000498614 CELA3BP08861 270 aa13.8□□□□□ -0.2
COL6A1-206ENST00000498614 COA6Q5JTJ3 125 aaKnown RBP13.8□□□□□ -0.2
COL6A1-206ENST00000498614 ZNF66Q6ZN08 573 aa13.8□□□□□ -0.2
COL6A1-206ENST00000498614 LINC00596Q86U02 117 aa13.8□□□□□ -0.2
COL6A1-206ENST00000498614 MED12LQ86YW9 2145 aa13.8□□□□□ -0.2
COL6A1-206ENST00000498614 UBALD1Q8TB05 177 aa13.8□□□□□ -0.2
COL6A1-206ENST00000498614 OR51I2Q9H344 312 aa13.8□□□□□ -0.2
COL6A1-206ENST00000498614 IGHV3-64DA0A0J9YX35 117 aa13.8□□□□□ -0.2
COL6A1-206ENST00000498614 ZNF705GA8MUZ8 300 aaPredicted RBP13.8□□□□□ -0.2
COL6A1-206ENST00000498614 H7BYZ3 331 aa13.8□□□□□ -0.2
COL6A1-206ENST00000498614 TESK1Q15569 626 aa13.8□□□□□ -0.2
COL6A1-206ENST00000498614 OR8G2PQ6IF36 304 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms