RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 SLC23A1Q9UHI7 598 aa10.56□□□□□ -0.72
CCDC58-207ENST00000498466 KMT2AQ03164 3969 aa10.56□□□□□ -0.72
CCDC58-207ENST00000498466 TRAV8-7A0A075B6U6 113 aa10.55□□□□□ -0.72
CCDC58-207ENST00000498466 TRBV12-3P01733 135 aa10.55□□□□□ -0.72
CCDC58-207ENST00000498466 LIMS3P0CW19 117 aa10.55□□□□□ -0.72
CCDC58-207ENST00000498466 LIMS4P0CW20 117 aa10.55□□□□□ -0.72
CCDC58-207ENST00000498466 CPEP16870 476 aa10.55□□□□□ -0.72
CCDC58-207ENST00000498466 FSTP19883 344 aa10.55□□□□□ -0.72
CCDC58-207ENST00000498466 AADACP22760 399 aa10.55□□□□□ -0.72
CCDC58-207ENST00000498466 DEFA5Q01523 94 aa10.55□□□□□ -0.72
CCDC58-207ENST00000498466 DYRK1AQ13627 763 aa10.55□□□□□ -0.72
CCDC58-207ENST00000498466 HMGN3Q15651 99 aa10.55□□□□□ -0.72
CCDC58-207ENST00000498466 OR2K2Q8NGT1 345 aa10.55□□□□□ -0.72
CCDC58-207ENST00000498466 SMIM19Q96E16 107 aa10.55□□□□□ -0.72
CCDC58-207ENST00000498466 OR14A2Q96R54 314 aa10.55□□□□□ -0.72
CCDC58-207ENST00000498466 ST6GALNAC5Q9BVH7 336 aa10.55□□□□□ -0.72
CCDC58-207ENST00000498466 SRD5A3Q9H8P0 318 aa10.55□□□□□ -0.72
CCDC58-207ENST00000498466 PEMTQ9UBM1 199 aa10.55□□□□□ -0.72
CCDC58-207ENST00000498466 RPL36Q9Y3U8 105 aaKnown RBP10.55□□□□□ -0.72
CCDC58-207ENST00000498466 CXorf65A6NEN9 183 aa10.54□□□□□ -0.72
CCDC58-207ENST00000498466 OR2A4O95047 310 aa10.54□□□□□ -0.72
CCDC58-207ENST00000498466 SPDEFO95238 335 aa10.54□□□□□ -0.72
CCDC58-207ENST00000498466 IGKV1-16P04430 117 aa10.54□□□□□ -0.72
CCDC58-207ENST00000498466 CD7P09564 240 aa10.54□□□□□ -0.72
CCDC58-207ENST00000498466 ALDH3A2P51648 485 aa10.54□□□□□ -0.72
CCDC58-207ENST00000498466 RPS16P62249 146 aaKnown RBP10.54□□□□□ -0.72
CCDC58-207ENST00000498466 PMS2P11Q13670 270 aa10.54□□□□□ -0.72
CCDC58-207ENST00000498466 OR2G6Q5TZ20 316 aa10.54□□□□□ -0.72
CCDC58-207ENST00000498466 ZNF343Q6P1L6 599 aa10.54□□□□□ -0.72
CCDC58-207ENST00000498466 TMPRSS11AQ6ZMR5 421 aa10.54□□□□□ -0.72
CCDC58-207ENST00000498466 LAX1Q8IWV1 398 aa10.54□□□□□ -0.72
CCDC58-207ENST00000498466 DRAXINQ8NBI3 349 aaPredicted RBP10.54□□□□□ -0.72
CCDC58-207ENST00000498466 BVESQ8NE79 360 aa10.54□□□□□ -0.72
CCDC58-207ENST00000498466 RHOXF1Q8NHV9 184 aa10.54□□□□□ -0.72
CCDC58-207ENST00000498466 FAM46BQ96A09 425 aa10.54□□□□□ -0.72
CCDC58-207ENST00000498466 WFDC10AQ9H1F0 79 aa10.54□□□□□ -0.72
CCDC58-207ENST00000498466 TRBV5-5A0A0J9YX44 114 aa10.53□□□□□ -0.72
CCDC58-207ENST00000498466 A0A1W2PPK0 400 aa10.53□□□□□ -0.72
CCDC58-207ENST00000498466 OR11H12B2RN74 326 aa10.53□□□□□ -0.72
CCDC58-207ENST00000498466 H3BNX3 289 aa10.53□□□□□ -0.72
CCDC58-207ENST00000498466 LGALS7P47929 136 aa10.53□□□□□ -0.72
CCDC58-207ENST00000498466 MECP2P51608 486 aaKnown RBP10.53□□□□□ -0.72
CCDC58-207ENST00000498466 CD300EQ496F6 205 aaPredicted RBP10.53□□□□□ -0.72
CCDC58-207ENST00000498466 Q499Y3 187 aa10.53□□□□□ -0.72
CCDC58-207ENST00000498466 SETD6Q8TBK2 473 aa10.53□□□□□ -0.72
CCDC58-207ENST00000498466 SULT4A1Q9BR01 284 aa10.53□□□□□ -0.72
CCDC58-207ENST00000498466 TINAGL1Q9GZM7 467 aaPredicted RBP10.53□□□□□ -0.72
CCDC58-207ENST00000498466 PARP12Q9H0J9 701 aaKnown RBP10.53□□□□□ -0.72
CCDC58-207ENST00000498466 CHMP1AQ9HD42 196 aaPredicted RBP10.53□□□□□ -0.72
CCDC58-207ENST00000498466 MRPS18AQ9NVS2 196 aaKnown RBP10.53□□□□□ -0.72
CCDC58-207ENST00000498466 PCLOQ9Y6V0 5065 aa10.52□□□□□ -0.72
CCDC58-207ENST00000498466 A0A0B4J203 849 aa10.52□□□□□ -0.73
CCDC58-207ENST00000498466 OGG1O15527 345 aa10.52□□□□□ -0.73
CCDC58-207ENST00000498466 AIREO43918 545 aa10.52□□□□□ -0.73
CCDC58-207ENST00000498466 CAPGP40121 348 aa10.52□□□□□ -0.73
CCDC58-207ENST00000498466 ETV1P50549 477 aa10.52□□□□□ -0.73
CCDC58-207ENST00000498466 YIF1BQ5BJH7 314 aa10.52□□□□□ -0.73
CCDC58-207ENST00000498466 CDH26Q8IXH8 852 aa10.52□□□□□ -0.73
CCDC58-207ENST00000498466 DYNLRB2Q8TF09 96 aa10.52□□□□□ -0.73
CCDC58-207ENST00000498466 SNAPC3Q92966 411 aa10.52□□□□□ -0.73
CCDC58-207ENST00000498466 USMG5Q96IX5 58 aa10.52□□□□□ -0.73
CCDC58-207ENST00000498466 NEDD4LQ96PU5 975 aa10.52□□□□□ -0.73
CCDC58-207ENST00000498466 FAAP24Q9BTP7 215 aa10.52□□□□□ -0.73
CCDC58-207ENST00000498466 BABAM2Q9NXR7 383 aa10.52□□□□□ -0.73
CCDC58-207ENST00000498466 FAM53CQ9NYF3 392 aa10.52□□□□□ -0.73
CCDC58-207ENST00000498466 COA4Q9NYJ1 87 aa10.52□□□□□ -0.73
CCDC58-207ENST00000498466 DNAH10Q8IVF4 4471 aa10.51□□□□□ -0.73
CCDC58-207ENST00000498466 ZNF785A8K8V0 405 aa10.51□□□□□ -0.73
CCDC58-207ENST00000498466 APOA2P02652 100 aa10.51□□□□□ -0.73
CCDC58-207ENST00000498466 LINC00205P59089 165 aa10.51□□□□□ -0.73
CCDC58-207ENST00000498466 SSBP2P81877 361 aaPredicted RBP10.51□□□□□ -0.73
CCDC58-207ENST00000498466 PJVKQ0ZLH3 352 aa10.51□□□□□ -0.73
CCDC58-207ENST00000498466 GUCA2BQ16661 112 aa10.51□□□□□ -0.73
CCDC58-207ENST00000498466 PDPNQ86YL7 162 aa10.51□□□□□ -0.73
CCDC58-207ENST00000498466 SVOPQ8N4V2 548 aa10.51□□□□□ -0.73
CCDC58-207ENST00000498466 ZNF383Q8NA42 475 aa10.51□□□□□ -0.73
CCDC58-207ENST00000498466 EDARADDQ8WWZ3 215 aa10.51□□□□□ -0.73
CCDC58-207ENST00000498466 TMEM68Q96MH6 324 aa10.51□□□□□ -0.73
CCDC58-207ENST00000498466 AGMATQ9BSE5 352 aa10.51□□□□□ -0.73
CCDC58-207ENST00000498466 C11orf54Q9H0W9 315 aaPredicted RBP10.51□□□□□ -0.73
CCDC58-207ENST00000498466 FGF20Q9NP95 211 aaPredicted RBP10.51□□□□□ -0.73
CCDC58-207ENST00000498466 TRBV5-7A0A0A0MS05 114 aa10.5□□□□□ -0.73
CCDC58-207ENST00000498466 NUPR2A6NF83 97 aa10.5□□□□□ -0.73
CCDC58-207ENST00000498466 ITGB1BP1O14713 200 aa10.5□□□□□ -0.73
CCDC58-207ENST00000498466 LALBAP00709 142 aa10.5□□□□□ -0.73
CCDC58-207ENST00000498466 APELAP0DMC3 54 aa10.5□□□□□ -0.73
CCDC58-207ENST00000498466 DCKP27707 260 aa10.5□□□□□ -0.73
CCDC58-207ENST00000498466 CEACAM6P40199 344 aa10.5□□□□□ -0.73
CCDC58-207ENST00000498466 RPS11P62280 158 aaKnown RBP eCLIP10.5□□□□□ -0.73
CCDC58-207ENST00000498466 C6orf201Q7Z4U5 140 aa10.5□□□□□ -0.73
CCDC58-207ENST00000498466 CBR4Q8N4T8 237 aa10.5□□□□□ -0.73
CCDC58-207ENST00000498466 ZFP41Q8N8Y5 198 aa10.5□□□□□ -0.73
CCDC58-207ENST00000498466 PYDC1Q8WXC3 89 aa10.5□□□□□ -0.73
CCDC58-207ENST00000498466 PHB2Q99623 299 aa10.5□□□□□ -0.73
CCDC58-207ENST00000498466 OR1A1Q9P1Q5 309 aa10.5□□□□□ -0.73
CCDC58-207ENST00000498466 GHRLQ9UBU3 117 aa10.5□□□□□ -0.73
CCDC58-207ENST00000498466 PROP1O75360 226 aa10.49□□□□□ -0.73
CCDC58-207ENST00000498466 MYL12AP19105 171 aa10.49□□□□□ -0.73
CCDC58-207ENST00000498466 ZBTB25P24278 435 aa10.49□□□□□ -0.73
CCDC58-207ENST00000498466 SMN1Q16637 294 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms