RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 VENTXO95231 258 aa9.58□□□□□ -0.88
CUX1-210ENST00000497815 IFNA2P01563 188 aa9.58□□□□□ -0.88
CUX1-210ENST00000497815 CD74P04233 296 aa9.58□□□□□ -0.88
CUX1-210ENST00000497815 BRS3P32247 399 aa9.58□□□□□ -0.88
CUX1-210ENST00000497815 HILS1P60008 231 aa9.58□□□□□ -0.88
CUX1-210ENST00000497815 ZNF846Q147U1 533 aa9.58□□□□□ -0.88
CUX1-210ENST00000497815 MEF2DQ14814 521 aa9.58□□□□□ -0.88
CUX1-210ENST00000497815 TUSC1Q2TAM9 212 aa9.58□□□□□ -0.88
CUX1-210ENST00000497815 SCGB2B2Q4G0G5 96 aa9.58□□□□□ -0.88
CUX1-210ENST00000497815 ZNF660Q6AZW8 331 aaPredicted RBP9.58□□□□□ -0.88
CUX1-210ENST00000497815 DHRS11Q6UWP2 260 aa9.58□□□□□ -0.88
CUX1-210ENST00000497815 GLDNQ6ZMI3 551 aaPredicted RBP9.58□□□□□ -0.88
CUX1-210ENST00000497815 OR8H3Q8N146 312 aa9.58□□□□□ -0.88
CUX1-210ENST00000497815 OR4C16Q8NGL9 310 aa9.58□□□□□ -0.88
CUX1-210ENST00000497815 SSMEM1Q8WWF3 244 aa9.58□□□□□ -0.88
CUX1-210ENST00000497815 CAPSLQ8WWF8 208 aa9.58□□□□□ -0.88
CUX1-210ENST00000497815 C5orf30Q96GV9 206 aa9.58□□□□□ -0.88
CUX1-210ENST00000497815 ZNF251Q9BRH9 671 aa9.58□□□□□ -0.88
CUX1-210ENST00000497815 FXYD6Q9H0Q3 95 aa9.58□□□□□ -0.88
CUX1-210ENST00000497815 DPAGT1Q9H3H5 408 aa9.58□□□□□ -0.88
CUX1-210ENST00000497815 GHITMQ9H3K2 345 aa9.58□□□□□ -0.88
CUX1-210ENST00000497815 PRDM13Q9H4Q3 707 aa9.58□□□□□ -0.88
CUX1-210ENST00000497815 CCL28Q9NRJ3 127 aa9.58□□□□□ -0.88
CUX1-210ENST00000497815 MCUBQ9NWR8 336 aa9.58□□□□□ -0.88
CUX1-210ENST00000497815 SDHAF2Q9NX18 166 aa9.58□□□□□ -0.88
CUX1-210ENST00000497815 OR5H14A6NHG9 310 aa9.57□□□□□ -0.88
CUX1-210ENST00000497815 DISC1C4P0D8 188 aa9.57□□□□□ -0.88
CUX1-210ENST00000497815 TXNL1O43396 289 aa9.57□□□□□ -0.88
CUX1-210ENST00000497815 PROP1O75360 226 aa9.57□□□□□ -0.88
CUX1-210ENST00000497815 SNRNP70P08621 437 aaKnown RBP9.57□□□□□ -0.88
CUX1-210ENST00000497815 IL7P13232 177 aa9.57□□□□□ -0.88
CUX1-210ENST00000497815 PPP5CP53041 499 aa9.57□□□□□ -0.88
CUX1-210ENST00000497815 LINC00205P59089 165 aa9.57□□□□□ -0.88
CUX1-210ENST00000497815 AP3S2P59780 193 aa9.57□□□□□ -0.88
CUX1-210ENST00000497815 KLF9Q13886 244 aaPredicted RBP9.57□□□□□ -0.88
CUX1-210ENST00000497815 HES1Q14469 280 aa9.57□□□□□ -0.88
CUX1-210ENST00000497815 HNF4GQ14541 408 aa9.57□□□□□ -0.88
CUX1-210ENST00000497815 SLC9A3R2Q15599 337 aa9.57□□□□□ -0.88
CUX1-210ENST00000497815 ARRDC1Q8N5I2 433 aa9.57□□□□□ -0.88
CUX1-210ENST00000497815 ZNF645Q8N7E2 425 aa9.57□□□□□ -0.88
CUX1-210ENST00000497815 ZDHHC22Q8N966 263 aa9.57□□□□□ -0.88
CUX1-210ENST00000497815 PIFOQ8TCI5 191 aa9.57□□□□□ -0.88
CUX1-210ENST00000497815 CFHR4Q92496 578 aa9.57□□□□□ -0.88
CUX1-210ENST00000497815 MOB3AQ96BX8 217 aa9.57□□□□□ -0.88
CUX1-210ENST00000497815 JMJD8Q96S16 334 aa9.57□□□□□ -0.88
CUX1-210ENST00000497815 NABP2Q9BQ15 211 aa9.57□□□□□ -0.88
CUX1-210ENST00000497815 CHIAQ9BZP6 476 aa9.57□□□□□ -0.88
CUX1-210ENST00000497815 WDR12Q9GZL7 423 aaKnown RBP9.57□□□□□ -0.88
CUX1-210ENST00000497815 VGLL3A8MV65 326 aa9.56□□□□□ -0.88
CUX1-210ENST00000497815 TNFSF12O43508 249 aa9.56□□□□□ -0.88
CUX1-210ENST00000497815 IGKV1D-33P01593 117 aa9.56□□□□□ -0.88
CUX1-210ENST00000497815 IGKV1-33P01594 117 aa9.56□□□□□ -0.88
CUX1-210ENST00000497815 IGLV2-14P01704 120 aa9.56□□□□□ -0.88
CUX1-210ENST00000497815 ZNF735P0CB33 412 aa9.56□□□□□ -0.88
CUX1-210ENST00000497815 CT45A6P0DMU7 189 aa9.56□□□□□ -0.88
CUX1-210ENST00000497815 CT45A5P0DMU8 189 aa9.56□□□□□ -0.88
CUX1-210ENST00000497815 CT45A7P0DMV0 189 aa9.56□□□□□ -0.88
CUX1-210ENST00000497815 LSAMPQ13449 338 aa9.56□□□□□ -0.88
CUX1-210ENST00000497815 FBLN7Q53RD9 439 aa9.56□□□□□ -0.88
CUX1-210ENST00000497815 AADACL3Q5VUY0 350 aa9.56□□□□□ -0.88
CUX1-210ENST00000497815 FAM71F2Q6NXP2 309 aa9.56□□□□□ -0.88
CUX1-210ENST00000497815 TMEM219Q86XT9 240 aa9.56□□□□□ -0.88
CUX1-210ENST00000497815 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.56□□□□□ -0.88
CUX1-210ENST00000497815 OR51S1Q8NGJ8 323 aa9.56□□□□□ -0.88
CUX1-210ENST00000497815 OR5R1Q8NH85 324 aa9.56□□□□□ -0.88
CUX1-210ENST00000497815 FAM216AQ8WUB2 273 aa9.56□□□□□ -0.88
CUX1-210ENST00000497815 GPHA2Q96T91 129 aa9.56□□□□□ -0.88
CUX1-210ENST00000497815 HRASLSQ9HDD0 168 aa9.56□□□□□ -0.88
CUX1-210ENST00000497815 VPREB3Q9UKI3 123 aa9.56□□□□□ -0.88
CUX1-210ENST00000497815 H7C2Y5 167 aa9.55□□□□□ -0.88
CUX1-210ENST00000497815 SLC22A5O76082 557 aa9.55□□□□□ -0.88
CUX1-210ENST00000497815 FAM106CPP0CH98 169 aa9.55□□□□□ -0.88
CUX1-210ENST00000497815 PGAM2P15259 253 aa9.55□□□□□ -0.88
CUX1-210ENST00000497815 CD40LGP29965 261 aa9.55□□□□□ -0.88
CUX1-210ENST00000497815 FAUP35544 74 aaKnown RBP9.55□□□□□ -0.88
CUX1-210ENST00000497815 DYNLT3P51808 116 aa9.55□□□□□ -0.88
CUX1-210ENST00000497815 UBA52P62987 128 aaKnown RBP9.55□□□□□ -0.88
CUX1-210ENST00000497815 AANATQ16613 207 aa9.55□□□□□ -0.88
CUX1-210ENST00000497815 ZNF818PQ6ZRF7 136 aa9.55□□□□□ -0.88
CUX1-210ENST00000497815 PRIMA1Q86XR5 153 aa9.55□□□□□ -0.88
CUX1-210ENST00000497815 ZNF383Q8NA42 475 aa9.55□□□□□ -0.88
CUX1-210ENST00000497815 TERB2Q8NHR7 220 aa9.55□□□□□ -0.88
CUX1-210ENST00000497815 CCDC32Q9BV29 185 aa9.55□□□□□ -0.88
CUX1-210ENST00000497815 GAB2Q9UQC2 676 aa9.55□□□□□ -0.88
CUX1-210ENST00000497815 TCF19Q9Y242 345 aa9.55□□□□□ -0.88
CUX1-210ENST00000497815 POMT1Q9Y6A1 747 aa9.55□□□□□ -0.88
CUX1-210ENST00000497815 MTORP42345 2549 aa9.54□□□□□ -0.88
CUX1-210ENST00000497815 A0A0A6YYJ9 748 aa9.54□□□□□ -0.88
CUX1-210ENST00000497815 A6NDX4 124 aa9.54□□□□□ -0.88
CUX1-210ENST00000497815 GPR137BO60478 399 aa9.54□□□□□ -0.88
CUX1-210ENST00000497815 TMEM11P17152 192 aa9.54□□□□□ -0.88
CUX1-210ENST00000497815 PI3P19957 117 aa9.54□□□□□ -0.88
CUX1-210ENST00000497815 CD1BP29016 333 aa9.54□□□□□ -0.88
CUX1-210ENST00000497815 GNRHRP30968 328 aa9.54□□□□□ -0.88
CUX1-210ENST00000497815 THBS3P49746 956 aa9.54□□□□□ -0.88
CUX1-210ENST00000497815 PHLDA2Q53GA4 152 aa9.54□□□□□ -0.88
CUX1-210ENST00000497815 OR2B11Q5JQS5 317 aa9.54□□□□□ -0.88
CUX1-210ENST00000497815 CCBE1Q6UXH8 406 aaPredicted RBP9.54□□□□□ -0.88
CUX1-210ENST00000497815 IDO2Q6ZQW0 420 aa9.54□□□□□ -0.88
CUX1-210ENST00000497815 LHFPL1Q86WI0 220 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms