RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 NRGNQ92686 78 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 CLDN23Q96B33 292 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 ROPN1LQ96C74 230 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 CERS2Q96G23 380 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 TIMM17AQ99595 171 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 TSNAXQ99598 290 aaKnown RBP1.55□□□□□ -2.16
CBX3-208ENST00000497498 PRRT1Q99946 306 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 HOPXQ9BPY8 73 aaPredicted RBP1.55□□□□□ -2.16
CBX3-208ENST00000497498 C11orf70Q9BRQ4 267 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 PBDC1Q9BVG4 233 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 GGACTQ9BVM4 153 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 BEX2Q9BXY8 128 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 ACTR3CQ9C0K3 210 aaPredicted RBP1.55□□□□□ -2.16
CBX3-208ENST00000497498 SLIRPQ9GZT3 109 aaKnown RBP1.55□□□□□ -2.16
CBX3-208ENST00000497498 SRRQ9GZT4 340 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 TOLLIPQ9H0E2 274 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 MED28Q9H204 178 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 PORCNQ9H237 461 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 DCSTAMPQ9H295 470 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 SLC38A1Q9H2H9 487 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 GEMIN7Q9H840 131 aaKnown RBP1.55□□□□□ -2.16
CBX3-208ENST00000497498 TUBA4BQ9H853 241 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 TPT1P8Q9HAU6 139 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 ACP6Q9NPH0 428 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 SIRT7Q9NRC8 400 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 SMCO4Q9NRQ5 59 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 RASL12Q9NYN1 266 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 SLC17A7Q9P2U7 560 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 PEF1Q9UBV8 284 aaKnown RBP1.55□□□□□ -2.16
CBX3-208ENST00000497498 MTFP1Q9UDX5 166 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 C3orf18Q9UK00 162 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 GNG8Q9UK08 70 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 POFUT2Q9Y2G5 429 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 YTHDF2Q9Y5A9 579 aaKnown RBP1.55□□□□□ -2.16
CBX3-208ENST00000497498 IGSF9BQ9UPX0 1349 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 TET1Q8NFU7 2136 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 KNTC1P50748 2209 aa1.55□□□□□ -2.16
CBX3-208ENST00000497498 TRRAPQ9Y4A5 3859 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 MICAL3Q7RTP6 2002 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 GOLGA4Q13439 2230 aaKnown RBP1.54□□□□□ -2.16
CBX3-208ENST00000497498 A0A1B0GV90 55 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 DHRS12A0PJE2 317 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 SLC5A10A0PJK1 596 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 C5orf63A6NC05 138 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 MGAT4DA6NG13 374 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 NCBP2LA6PVI3 153 aaKnown RBP1.54□□□□□ -2.16
CBX3-208ENST00000497498 SEC14L6B5MCN3 397 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 NDUFC2-KCTD14E9PQ53 114 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 SMKR1H3BMG3 65 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 K7EP13 123 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 DNASE2O00115 360 aaPredicted RBP1.54□□□□□ -2.16
CBX3-208ENST00000497498 TP53I11O14683 189 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 UBDO15205 165 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 MRPS12O15235 138 aaKnown RBP1.54□□□□□ -2.16
CBX3-208ENST00000497498 RBFOX2O43251 390 aaKnown RBP eCLIP1.54□□□□□ -2.16
CBX3-208ENST00000497498 EIF4E2O60573 245 aaKnown RBP1.54□□□□□ -2.16
CBX3-208ENST00000497498 STK16O75716 305 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 POP7O75817 140 aaKnown RBP1.54□□□□□ -2.16
CBX3-208ENST00000497498 GATBO75879 557 aaKnown RBP1.54□□□□□ -2.16
CBX3-208ENST00000497498 ATG12O94817 140 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 GADD45GO95257 159 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 HLA-DQB1P01920 261 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 APOC3P02656 99 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 MT-ND4LP03901 98 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 RPN2P04844 631 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 IGKV4-1P06312 121 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 ERCC1P07992 297 aaPredicted RBP1.54□□□□□ -2.16
CBX3-208ENST00000497498 CD3GP09693 182 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 CTXN2P0C2S0 81 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 SLC35E2BP0CK96 405 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 STAG3L2P0CL84 134 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 GIMD1P0DJR0 217 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 GTF2F2P13984 249 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 HIST1H1BP16401 226 aaKnown RBP1.54□□□□□ -2.16
CBX3-208ENST00000497498 PTNP21246 168 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 OMGP23515 440 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 AGTR1P30556 359 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 GNRHRP30968 328 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 RPA3P35244 121 aaPredicted RBP1.54□□□□□ -2.16
CBX3-208ENST00000497498 SSTR5P35346 364 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 MAGEA12P43365 314 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 CX3CR1P49238 355 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 MRPL19P49406 292 aaKnown RBP1.54□□□□□ -2.16
CBX3-208ENST00000497498 NUDT2P50583 147 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 P2RX1P51575 399 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 KLF3P57682 345 aaPredicted RBP1.54□□□□□ -2.16
CBX3-208ENST00000497498 TAS2R46P59540 309 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 UBE2NP61088 152 aaKnown RBP1.54□□□□□ -2.16
CBX3-208ENST00000497498 PPP1CBP62140 327 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 CACNG7P62955 275 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 PPP3R1P63098 170 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 DEFB103AP81534 67 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 DEFA5Q01523 94 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 EMX2Q04743 252 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 TNFRSF9Q07011 255 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 PEA15Q15121 130 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 TSNQ15631 228 aaKnown RBP1.54□□□□□ -2.16
CBX3-208ENST00000497498 GABRA6Q16445 453 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 TAF9Q16594 264 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 UBE2SQ16763 222 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms