RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, human

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3C-208	ENST00000497368	AHSA2	Q719I0	299 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	C6orf201	Q7Z4U5	140 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	HAPLN4	Q86UW8	402 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	JAGN1	Q8N5M9	183 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	NANOGP1	Q8N7R0	232 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	ZNF491	Q8N8L2	437 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	ZNF565	Q8N9K5	539 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	OR2T10	Q8NGZ9	312 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	NTN5	Q8WTR8	489 aa	Predicted RBP	4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	C4orf3	Q8WVX3	66 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	FAM46B	Q96A09	425 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	TMEM80	Q96HE8	168 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	KCTD7	Q96MP8	289 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	AGMAT	Q9BSE5	352 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	ABHD14A	Q9BUJ0	271 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	C1orf43	Q9BWL3	253 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	BARHL1	Q9BZE3	327 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	SELENOI	Q9C0D9	397 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	LPAR5	Q9H1C0	372 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	ZFP57	Q9NU63	452 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	PLCXD1	Q9NUJ7	323 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	ETAA1	Q9NY74	926 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	CNOT2	Q9NZN8	540 aa	Known RBP	4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	OR1A1	Q9P1Q5	309 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	NKX1-2	Q9UD57	310 aa	Predicted RBP	4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	JPT1	Q9UK76	154 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	PEX16	Q9Y5Y5	336 aa		4.24	□□□□□ -1.73
UBE3C-208	ENST00000497368	IGHV4OR15-8	A0A075B7B6	117 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368		A0A087WW49	117 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	TRBV6-6	A0A0A6YYG2	114 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	EFCAB10	A6NFE3	127 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	SNTN	A6NMZ2	147 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	ANKRD65	E5RJM6	399 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368		H0YJW9	148 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	FCN1	O00602	326 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	ARPC1B	O15143	372 aa	Known RBP	4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	LDLRAD4	O15165	306 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	SLC22A1	O15245	554 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	SOCS1	O15524	211 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	DUS4L	O95620	317 aa	Known RBP	4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	BAG2	O95816	211 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	CDK1	P06493	297 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	UCHL1	P09936	223 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	CT45A6	P0DMU7	189 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	CT45A5	P0DMU8	189 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	CT45A7	P0DMV0	189 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	CEL	P19835	753 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	GZMH	P20718	246 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	SLC6A1	P30531	599 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	CAPG	P40121	348 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	ARHGDIB	P52566	201 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	TMEM50B	P56557	158 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	ACTB	P60709	375 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	RPS25	P62851	125 aa	Known RBP	4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	RPS27A	P62979	156 aa	Known RBP	4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	DEFA5	Q01523	94 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	PNLIPRP3	Q17RR3	467 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	C5orf64	Q2M2E5	130 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	TMEM30B	Q3MIR4	351 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	RNLS	Q5VYX0	342 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	TEX38	Q6PEX7	206 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	GLDN	Q6ZMI3	551 aa	Predicted RBP	4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	TMPRSS11A	Q6ZMR5	421 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	FOXRED2	Q8IWF2	684 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	CDH26	Q8IXH8	852 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	PRR18	Q8N4B5	295 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	COMMD1	Q8N668	190 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	PACRGL	Q8N7B6	248 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	MINDY2	Q8NBR6	621 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	NPB	Q8NG41	125 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	MRPS24	Q96EL2	167 aa	Known RBP	4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	MRPL48	Q96GC5	212 aa	Known RBP	4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	FAAP24	Q9BTP7	215 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	ANKRD60	Q9BZ19	345 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	GAR1	Q9NY12	217 aa	Known RBP	4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	WSB1	Q9Y6I7	421 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	DNAH2	Q9P225	4427 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	HERC2	O95714	4834 aa		4.23	□□□□□ -1.73
UBE3C-208	ENST00000497368	DNAH17	Q9UFH2	4485 aa		4.22	□□□□□ -1.73
UBE3C-208	ENST00000497368	FAT2	Q9NYQ8	4349 aa		4.22	□□□□□ -1.73
UBE3C-208	ENST00000497368	IGKV1D-8	A0A087WSZ0	117 aa		4.22	□□□□□ -1.73
UBE3C-208	ENST00000497368	TRIM64C	A6NLI5	447 aa		4.22	□□□□□ -1.73
UBE3C-208	ENST00000497368	NCBP2L	A6PVI3	153 aa	Known RBP	4.22	□□□□□ -1.73
UBE3C-208	ENST00000497368	ZNF785	A8K8V0	405 aa		4.22	□□□□□ -1.73
UBE3C-208	ENST00000497368	NBR2	O15453	112 aa		4.22	□□□□□ -1.73
UBE3C-208	ENST00000497368	MAGEB3	O15480	346 aa		4.22	□□□□□ -1.73
UBE3C-208	ENST00000497368	TXNL1	O43396	289 aa		4.22	□□□□□ -1.73
UBE3C-208	ENST00000497368	YPEL1	O60688	119 aa		4.22	□□□□□ -1.73
UBE3C-208	ENST00000497368	ZNF780A	O75290	641 aa	Predicted RBP	4.22	□□□□□ -1.73
UBE3C-208	ENST00000497368	CRTAP	O75718	401 aa	Predicted RBP	4.22	□□□□□ -1.73
UBE3C-208	ENST00000497368	IGLV2-23	P01705	113 aa		4.22	□□□□□ -1.73
UBE3C-208	ENST00000497368	CSTB	P04080	98 aa	Known RBP	4.22	□□□□□ -1.73
UBE3C-208	ENST00000497368	IGKV1-16	P04430	117 aa		4.22	□□□□□ -1.73
UBE3C-208	ENST00000497368	GLA	P06280	429 aa		4.22	□□□□□ -1.73
UBE3C-208	ENST00000497368	MYL12A	P19105	171 aa		4.22	□□□□□ -1.73
UBE3C-208	ENST00000497368	FUT3	P21217	361 aa		4.22	□□□□□ -1.73
UBE3C-208	ENST00000497368	SOX6	P35712	828 aa		4.22	□□□□□ -1.73
UBE3C-208	ENST00000497368	AQP4	P55087	323 aa		4.22	□□□□□ -1.73
UBE3C-208	ENST00000497368	HLA-DRB3	P79483	266 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms