RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 OR2S2Q9NQN1 319 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 GPR173Q9NS66 373 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 SLC2A8Q9NY64 477 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 OR5V1Q9UGF6 321 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 SIGLEC7Q9Y286 467 aa4.13□□□□□ -1.75
CSMD3-208ENST00000497026 LOC100509620A0A075B734 347 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 IGHV2OR16-5A0A0B4J2B6 119 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 C20orf202A1L168 122 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 FAM183AA6NL82 134 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 AGPAT2O15120 278 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 CYB5BO43169 146 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 SLC2A10O95528 541 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 IGHV4-39P01824 125 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 IGHG1P01857 330 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 PPBPP02775 128 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 TK1P04183 234 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 MRPL3P09001 348 aaKnown RBP4.12□□□□□ -1.75
CSMD3-208ENST00000497026 CST2P09228 141 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 MMP7P09237 267 aaPredicted RBP4.12□□□□□ -1.75
CSMD3-208ENST00000497026 OR2T7P0C7T2 308 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 OR5H8P0DN80 308 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 CD37P11049 281 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 LYL1P12980 280 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 CD99P14209 185 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 SRMP19623 302 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 TBPP20226 339 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 BMI1P35226 326 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 DAP3P51398 398 aaKnown RBP4.12□□□□□ -1.75
CSMD3-208ENST00000497026 NANOS2P60321 138 aaKnown RBP4.12□□□□□ -1.75
CSMD3-208ENST00000497026 UBE2KP61086 200 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 ZNF85Q03923 595 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 ZNF616Q08AN1 781 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 MIDNQ504T8 468 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 PDZD11Q5EBL8 140 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 SOHLH1Q5JUK2 328 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 SLC25A47Q6Q0C1 308 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 CLEC2AQ6UVW9 174 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 UNQ9370/PRO34162Q6UXP9 181 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 FOXL2NBQ6ZUU3 175 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 FAM57BQ71RH2 274 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 SLC25A42Q86VD7 318 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 MUC15Q8N387 334 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 SLC22A24Q8N4F4 322 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 OR2D3Q8NGH3 330 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 OR52N4Q8NGI2 321 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 OR13C5Q8NGS8 318 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 OR2T27Q8NH04 317 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 OR1P1Q8NH06 330 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 HPSE2Q8WWQ2 592 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 NABP1Q96AH0 204 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 ACY3Q96HD9 319 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 Q96M85 177 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 SCGB3A2Q96PL1 93 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 TNFRSF13CQ96RJ3 184 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 GPX7Q96SL4 187 aaPredicted RBP4.12□□□□□ -1.75
CSMD3-208ENST00000497026 HIST1H2BLQ99880 126 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 SMR3AQ99954 134 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 ATG101Q9BSB4 218 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 PCGF1Q9BSM1 259 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 C20orf24Q9BUV8 137 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 TXNIPQ9H3M7 391 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 PLEKHA2Q9HB19 425 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 LPAR2Q9HBW0 351 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 ADGRL4Q9HBW9 690 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 RAB18Q9NP72 206 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 NOX4Q9NPH5 578 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 CMC2Q9NRP2 79 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 CYTL1Q9NRR1 136 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 CBLN4Q9NTU7 201 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 TMEM38BQ9NVV0 291 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 HAO2Q9NYQ3 351 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 ZNF230Q9UIE0 474 aaPredicted RBP4.12□□□□□ -1.75
CSMD3-208ENST00000497026 ZNF346Q9UL40 294 aaKnown RBP4.12□□□□□ -1.75
CSMD3-208ENST00000497026 STARD10Q9Y365 291 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 MMP24Q9Y5R2 645 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 RTTNQ86VV8 2226 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 ZNF736B4DX44 427 aaPredicted RBP4.12□□□□□ -1.75
CSMD3-208ENST00000497026 H7C1C5 153 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 PRYO14603 147 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 TCF21O43680 179 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 SOX15O60248 233 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 SCGNO76038 276 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 DUS4LO95620 317 aaKnown RBP4.12□□□□□ -1.75
CSMD3-208ENST00000497026 CRYAAP02489 173 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 CSTBP04080 98 aaKnown RBP4.12□□□□□ -1.75
CSMD3-208ENST00000497026 CD3DP04234 171 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 SFTPBP07988 381 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 OR8U9P0C7N5 309 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 GZMBP10144 247 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 CTLA4P16410 223 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 ZBTB25P24278 435 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 OR10J1P30954 320 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 CDAP32320 146 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 ARR3P36575 388 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 TAGLN2P37802 199 aaKnown RBP4.12□□□□□ -1.75
CSMD3-208ENST00000497026 CEBPGP53567 150 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 ATP5J2P56134 94 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 KLF3P57682 345 aaPredicted RBP4.12□□□□□ -1.75
CSMD3-208ENST00000497026 RPL27P61353 136 aaKnown RBP4.12□□□□□ -1.75
CSMD3-208ENST00000497026 SELENOTP62341 195 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms