RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 CRLF1O75462 422 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 OXTP01178 125 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 IGF1P05019 195 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 SRD5A1P18405 259 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 CNTFRP26992 372 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 TSPOP30536 169 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 SRP14P37108 136 aaKnown RBP2.58□□□□□ -2
SNRNP48-202ENST00000496946 ISL1P61371 349 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 RPS14P62263 151 aaKnown RBP2.58□□□□□ -2
SNRNP48-202ENST00000496946 ZNF92Q03936 586 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 AADACL3Q5VUY0 350 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 MRPL54Q6P161 138 aaKnown RBP2.58□□□□□ -2
SNRNP48-202ENST00000496946 GOLT1AQ6ZVE7 132 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 Q71RC1 249 aaPredicted RBP2.58□□□□□ -2
SNRNP48-202ENST00000496946 TMEM86AQ8N2M4 240 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 GPD1LQ8N335 351 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 RNF175Q8N4F7 328 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 KCNRGQ8N5I3 272 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 ZDHHC22Q8N966 263 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 OR51G1Q8NGK1 321 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 CNIH3Q8TBE1 160 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 CLDN23Q96B33 292 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 PPCDCQ96CD2 204 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 AP1S3Q96PC3 154 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 PRR25Q96S07 402 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 SDF2Q99470 211 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 TCEAL2Q9H3H9 227 aaPredicted RBP2.58□□□□□ -2
SNRNP48-202ENST00000496946 ZNF665Q9H7R5 613 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 LSM7Q9UK45 103 aaKnown RBP2.58□□□□□ -2
SNRNP48-202ENST00000496946 NTNG1Q9Y2I2 539 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 OR1A2Q9Y585 309 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 IER3IP1Q9Y5U9 82 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 IQGAP3Q86VI3 1631 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 CITO14578 2027 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 CUL7Q14999 1698 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 TRIP11Q15643 1979 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 TSPAN11A1L157 253 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 CD300LBA8K4G0 201 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 NME4O00746 187 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 XKRYO14609 159 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 NPFFO15130 113 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 HYPMO75409 117 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 CYB5AP00167 134 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 HRASP01112 189 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 KRASP01116 189 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 REG1AP05451 166 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 PGA4P0DJD7 388 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 PGA5P0DJD9 388 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 TFPIP10646 304 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 FOLR3P41439 243 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 SSR4P51571 173 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 KLRD1Q13241 179 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 ELOBQ15370 118 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 IZUMO4Q1ZYL8 232 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 KIAA1644Q3SXP7 199 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 SYT14P1Q58G82 188 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 LAIR2Q6ISS4 152 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 ZNF730Q6ZMV8 503 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 BHLHA9Q7RTU4 235 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 ZNF709Q8N972 641 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 OR4A5Q8NH83 315 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 OR1L1Q8NH94 360 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 OR51E1Q8TCB6 317 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 MCHR1Q99705 422 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 SFXN3Q9BWM7 321 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 ULBP3Q9BZM4 244 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 FBXL15Q9H469 300 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 TMEM30AQ9NV96 361 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 RBM22Q9NW64 420 aaKnown RBP eCLIP2.58□□□□□ -2
SNRNP48-202ENST00000496946 SIGLEC8Q9NYZ4 499 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 KLHDC2Q9Y2U9 406 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 HS3ST3B1Q9Y662 390 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 KIF13BQ9NQT8 1826 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 USP6P35125 1406 aa2.58□□□□□ -2
SNRNP48-202ENST00000496946 ABCC1P33527 1531 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 LOC107984640A0A0U1RRK4 108 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 FAM236DA0A1B0GTK5 79 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 FAM231BA6NCW3 169 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 SNRPGP15A8MWD9 76 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 FAM157AC9JC47 383 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 CCL24O00175 119 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 HSPB6O14558 160 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 SH2D1BO14796 132 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 TRIAP1O43715 76 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 EFNA2O43921 213 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 YPEL1O60688 119 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 UBL3O95164 117 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 SFT2D2O95562 160 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 SCTP09683 121 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 FAM236CP0DP71 79 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 CTRLP40313 264 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 PGGT1BP53609 377 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 NDUFV3P56181 108 aaKnown RBP2.57□□□□□ -2
SNRNP48-202ENST00000496946 ADIRFQ15847 76 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 SLC25A35Q3KQZ1 300 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 RNASE12Q5GAN4 147 aaKnown RBP2.57□□□□□ -2
SNRNP48-202ENST00000496946 LCN8Q6JVE9 175 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 C19orf48Q6RUI8 117 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 HRCT1Q6UXD1 115 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 C1QL2Q7Z5L3 287 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms