RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 CSMD1Q96PZ7 3565 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 SPG11Q96JI7 2443 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 PKDREJQ9NTG1 2253 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 CHD3Q12873 2000 aaKnown RBP5.24□□□□□ -1.57
SSBP1-213ENST00000496622 C7orf66A4D0T2 115 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 M0QYG6 137 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 SOCS1O15524 211 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 WDR1O75083 606 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 ZNF205O95201 554 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 MPIG6BO95866 241 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 CD3DP04234 171 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 MMP7P09237 267 aaPredicted RBP5.24□□□□□ -1.57
SSBP1-213ENST00000496622 PET100P0DJ07 73 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 CD37P11049 281 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 AZU1P20160 251 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 UBE2MP61081 183 aaKnown RBP5.24□□□□□ -1.57
SSBP1-213ENST00000496622 SMAGPQ0VAQ4 97 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 KLF9Q13886 244 aaPredicted RBP5.24□□□□□ -1.57
SSBP1-213ENST00000496622 GGNBP1Q5YKI7 109 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 ZNF660Q6AZW8 331 aaPredicted RBP5.24□□□□□ -1.57
SSBP1-213ENST00000496622 MRGPRGQ86SM5 289 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 ZNF584Q8IVC4 421 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 TNFAIP8L1Q8WVP5 186 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 NRGNQ92686 78 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 SEC11CQ9BY50 192 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 KRTAP17-1Q9BYP8 105 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 OR51J1Q9H342 316 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 ACKR4Q9NPB9 350 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 SLC17A5Q9NRA2 495 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 ZGRF1Q86YA3 2104 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 IGKV1-27A0A075B6S5 117 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 A0A0A6YYD4 124 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 UBE2QL1A1L167 161 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 HSPB2A8KAH6 182 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 RAB27BO00194 218 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 XRCC3O43542 346 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 DNPH1O43598 174 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 OR7C2O60412 319 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 CEACAM4O75871 244 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 HPRT1P00492 218 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 OR4A8P0C604 315 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 FCGR2AP12318 317 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 GATA3P23771 443 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 AGTR1P30556 359 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 ZNF133P52736 654 aaPredicted RBP5.24□□□□□ -1.57
SSBP1-213ENST00000496622 GRB2P62993 217 aaKnown RBP5.24□□□□□ -1.57
SSBP1-213ENST00000496622 RTP5Q14D33 572 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 KISS1Q15726 138 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 HSPB2Q16082 182 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 FOXL2NBQ6ZUU3 175 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 TMEM116Q8NCL8 245 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 FCAMRQ8WWV6 532 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 OR6C3Q9NZP0 311 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 ST3GAL6Q9Y274 331 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 TIMM10BQ9Y5J6 103 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 DCHS2Q6V1P9 2916 aa5.24□□□□□ -1.57
SSBP1-213ENST00000496622 IGKV3D-15A0A087WSY6 115 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 TRAV30A0A087WSZ9 112 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 A0A1B0GUS0 222 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 DHRS7CA6NNS2 312 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 MCRIP1C9JLW8 97 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 TRAPPC2LH3BP13 241 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 DHRS3O75911 302 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 HPXP02790 462 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 NFYAP23511 347 aaPredicted RBP5.23□□□□□ -1.57
SSBP1-213ENST00000496622 SSTR5P35346 364 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 SNU13P55769 128 aaKnown RBP5.23□□□□□ -1.57
SSBP1-213ENST00000496622 RPS20P60866 119 aaKnown RBP5.23□□□□□ -1.57
SSBP1-213ENST00000496622 HIST1H3AP68431 136 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 PAX2Q02962 417 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 TNXAQ16473 311 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 LINC00303Q3SY05 128 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 GSG1LQ6UXU4 331 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 Q6ZTK2 550 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 HIST2H3AQ71DI3 136 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 C9orf106Q8NAJ2 232 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 SPTSSAQ969W0 71 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 SEH1LQ96EE3 360 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 C1orf147Q96MC9 270 aaPredicted RBP5.23□□□□□ -1.57
SSBP1-213ENST00000496622 HIST1H2BLQ99880 126 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 PLEKHA2Q9HB19 425 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 SLC45A2Q9UMX9 530 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 SPTBN1Q01082 2364 aaKnown RBP5.23□□□□□ -1.57
SSBP1-213ENST00000496622 TRAV17A0A0B4J275 112 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 A0A0D9SG52 128 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 OR6C6A6NF89 314 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 GABARAPH6UMI1 98 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 AGFG2O95081 481 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 FARS2O95363 451 aaKnown RBP5.23□□□□□ -1.57
SSBP1-213ENST00000496622 TMEM50BP56557 158 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 QRFPP83859 136 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 PAX5Q02548 391 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 GCSAMLQ5JQS6 135 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 C1orf194Q5T5A4 169 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 DOK3Q7L591 496 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 FAM24BQ8N5W8 94 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 SLC35G3Q8N808 338 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 ZNF738Q8NE65 137 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 OR52B4Q8NGK2 314 aa5.23□□□□□ -1.57
SSBP1-213ENST00000496622 SPATA3Q8NHX4 192 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms