RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 TAF15Q92804 592 aaKnown RBP eCLIP7.73□□□□□ -1.17
HPS4-217ENST00000496385 CYYR1Q96J86 154 aa7.73□□□□□ -1.17
HPS4-217ENST00000496385 UHRF2Q96PU4 802 aa7.73□□□□□ -1.17
HPS4-217ENST00000496385 HDHD3Q9BSH5 251 aaPredicted RBP7.73□□□□□ -1.17
HPS4-217ENST00000496385 GNB1LQ9BYB4 327 aa7.73□□□□□ -1.17
HPS4-217ENST00000496385 RNF24Q9Y225 148 aa7.73□□□□□ -1.17
HPS4-217ENST00000496385 PCNX3Q9H6A9 2034 aa7.73□□□□□ -1.17
HPS4-217ENST00000496385 TRAV9-2A0A087WT02 112 aa7.73□□□□□ -1.17
HPS4-217ENST00000496385 CDIPTO14735 213 aa7.73□□□□□ -1.17
HPS4-217ENST00000496385 GLI4P10075 376 aa7.73□□□□□ -1.17
HPS4-217ENST00000496385 FCGR2AP12318 317 aa7.73□□□□□ -1.17
HPS4-217ENST00000496385 KITLGP21583 273 aa7.73□□□□□ -1.17
HPS4-217ENST00000496385 CLDN15P56746 228 aa7.73□□□□□ -1.17
HPS4-217ENST00000496385 MRPL49Q13405 166 aaKnown RBP7.73□□□□□ -1.17
HPS4-217ENST00000496385 HLA-DRB5Q30154 266 aa7.73□□□□□ -1.17
HPS4-217ENST00000496385 STUMQ69YW2 141 aa7.73□□□□□ -1.17
HPS4-217ENST00000496385 OR4A47Q6IF82 309 aa7.73□□□□□ -1.17
HPS4-217ENST00000496385 RPP25LQ8N5L8 163 aaKnown RBP7.73□□□□□ -1.17
HPS4-217ENST00000496385 ZNF596Q8TC21 504 aa7.73□□□□□ -1.17
HPS4-217ENST00000496385 ZNF524Q96C55 264 aa7.73□□□□□ -1.17
HPS4-217ENST00000496385 KCNS1Q96KK3 526 aa7.73□□□□□ -1.17
HPS4-217ENST00000496385 STRADBQ9C0K7 418 aa7.73□□□□□ -1.17
HPS4-217ENST00000496385 TBC1D29Q9UFV1 150 aa7.73□□□□□ -1.17
HPS4-217ENST00000496385 GAGE12BA1L429 117 aa7.72□□□□□ -1.17
HPS4-217ENST00000496385 LIPT2A6NK58 231 aa7.72□□□□□ -1.17
HPS4-217ENST00000496385 AQP7P3A6NL99 342 aa7.72□□□□□ -1.17
HPS4-217ENST00000496385 MS4A18H0YCH9 400 aa7.72□□□□□ -1.17
HPS4-217ENST00000496385 HRKO00198 91 aa7.72□□□□□ -1.17
HPS4-217ENST00000496385 PSG1P11464 419 aa7.72□□□□□ -1.17
HPS4-217ENST00000496385 RRADP55042 308 aa7.72□□□□□ -1.17
HPS4-217ENST00000496385 PAX2Q02962 417 aa7.72□□□□□ -1.17
HPS4-217ENST00000496385 TLE3Q04726 772 aa7.72□□□□□ -1.17
HPS4-217ENST00000496385 RBPJQ06330 500 aa7.72□□□□□ -1.17
HPS4-217ENST00000496385 TESK1Q15569 626 aa7.72□□□□□ -1.17
HPS4-217ENST00000496385 NNATQ16517 81 aa7.72□□□□□ -1.17
HPS4-217ENST00000496385 RSPO4Q2I0M5 234 aaPredicted RBP7.72□□□□□ -1.17
HPS4-217ENST00000496385 MS4A18Q3C1V0 323 aa7.72□□□□□ -1.17
HPS4-217ENST00000496385 WDR73Q6P4I2 378 aa7.72□□□□□ -1.17
HPS4-217ENST00000496385 DEFB125Q8N687 156 aa7.72□□□□□ -1.17
HPS4-217ENST00000496385 CPT1CQ8TCG5 803 aa7.72□□□□□ -1.17
HPS4-217ENST00000496385 MEGF9Q9H1U4 602 aa7.72□□□□□ -1.17
HPS4-217ENST00000496385 TAAR3PQ9P1P4 343 aa7.72□□□□□ -1.17
HPS4-217ENST00000496385 SMPXQ9UHP9 88 aa7.72□□□□□ -1.17
HPS4-217ENST00000496385 PCNX2A6NKB5 2137 aa7.72□□□□□ -1.17
HPS4-217ENST00000496385 FREM2Q5SZK8 3169 aa7.72□□□□□ -1.17
HPS4-217ENST00000496385 RP1P56715 2156 aa7.72□□□□□ -1.17
HPS4-217ENST00000496385 SPAARA0A1B0GVQ0 90 aa7.72□□□□□ -1.17
HPS4-217ENST00000496385 KIAA1324LA8MWY0 1029 aaPredicted RBP7.72□□□□□ -1.17
HPS4-217ENST00000496385 H0Y980 276 aa7.72□□□□□ -1.17
HPS4-217ENST00000496385 OPRM1P35372 400 aa7.72□□□□□ -1.17
HPS4-217ENST00000496385 AMTP48728 403 aa7.72□□□□□ -1.17
HPS4-217ENST00000496385 KIAA2026Q5HYC2 2103 aa7.72□□□□□ -1.17
HPS4-217ENST00000496385 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.72□□□□□ -1.17
HPS4-217ENST00000496385 BAHD1Q8TBE0 780 aaPredicted RBP7.72□□□□□ -1.17
HPS4-217ENST00000496385 MRPL13Q9BYD1 178 aaKnown RBP7.72□□□□□ -1.17
HPS4-217ENST00000496385 IL36BQ9NZH7 164 aa7.72□□□□□ -1.17
HPS4-217ENST00000496385 ALPK2Q86TB3 2170 aa7.72□□□□□ -1.17
HPS4-217ENST00000496385 FRYQ5TBA9 3013 aa7.72□□□□□ -1.17
HPS4-217ENST00000496385 C17orf105B2RV13 164 aa7.71□□□□□ -1.17
HPS4-217ENST00000496385 G3V4G9 280 aa7.71□□□□□ -1.17
HPS4-217ENST00000496385 TAX1BP3O14907 124 aa7.71□□□□□ -1.17
HPS4-217ENST00000496385 ZNF324O75467 553 aaPredicted RBP7.71□□□□□ -1.17
HPS4-217ENST00000496385 DHRS3O75911 302 aa7.71□□□□□ -1.17
HPS4-217ENST00000496385 THBS3P49746 956 aa7.71□□□□□ -1.17
HPS4-217ENST00000496385 OR1D5P58170 312 aa7.71□□□□□ -1.17
HPS4-217ENST00000496385 HIST3H3Q16695 136 aa7.71□□□□□ -1.17
HPS4-217ENST00000496385 TMEM164Q5U3C3 297 aa7.71□□□□□ -1.17
HPS4-217ENST00000496385 H1FNTQ75WM6 255 aaPredicted RBP7.71□□□□□ -1.17
HPS4-217ENST00000496385 OR10G8Q8NGN5 311 aa7.71□□□□□ -1.17
HPS4-217ENST00000496385 BORCS7Q96B45 105 aa7.71□□□□□ -1.17
HPS4-217ENST00000496385 FAM60AQ9NP50 221 aa7.71□□□□□ -1.17
HPS4-217ENST00000496385 PRTFDC1Q9NRG1 225 aa7.71□□□□□ -1.17
HPS4-217ENST00000496385 KCNIP2Q9NS61 270 aa7.71□□□□□ -1.17
HPS4-217ENST00000496385 C3orf79P0CE67 100 aa7.71□□□□□ -1.18
HPS4-217ENST00000496385 S100GP29377 79 aa7.71□□□□□ -1.18
HPS4-217ENST00000496385 S100A7P31151 101 aa7.71□□□□□ -1.18
HPS4-217ENST00000496385 ZNF90Q03938 601 aa7.71□□□□□ -1.18
HPS4-217ENST00000496385 C12orf54Q6X4T0 127 aa7.71□□□□□ -1.18
HPS4-217ENST00000496385 TCF23Q7RTU1 214 aa7.71□□□□□ -1.18
HPS4-217ENST00000496385 SAXO1Q8IYX7 474 aa7.71□□□□□ -1.18
HPS4-217ENST00000496385 SFXN3Q9BWM7 321 aa7.71□□□□□ -1.18
HPS4-217ENST00000496385 RBM24Q9BX46 236 aaKnown RBP7.71□□□□□ -1.18
HPS4-217ENST00000496385 LHFPL6Q9Y693 200 aa7.71□□□□□ -1.18
HPS4-217ENST00000496385 IGKV1D-43A0A0B4J1Z2 117 aa7.71□□□□□ -1.18
HPS4-217ENST00000496385 FRG2CA6NGY1 282 aa7.71□□□□□ -1.18
HPS4-217ENST00000496385 GJE1A6NN92 205 aa7.71□□□□□ -1.18
HPS4-217ENST00000496385 ALG1L2C9J202 215 aa7.71□□□□□ -1.18
HPS4-217ENST00000496385 C11orf94C9JXX5 98 aa7.71□□□□□ -1.18
HPS4-217ENST00000496385 LMO7DNF2Z398 122 aa7.71□□□□□ -1.18
HPS4-217ENST00000496385 SH2D1BO14796 132 aa7.71□□□□□ -1.18
HPS4-217ENST00000496385 RBFOX2O43251 390 aaKnown RBP eCLIP7.71□□□□□ -1.18
HPS4-217ENST00000496385 SYNGR2O43760 224 aa7.71□□□□□ -1.18
HPS4-217ENST00000496385 CD5LO43866 347 aa7.71□□□□□ -1.18
HPS4-217ENST00000496385 CDC34P49427 236 aaPredicted RBP7.71□□□□□ -1.18
HPS4-217ENST00000496385 Q6ZVH6 145 aa7.71□□□□□ -1.18
HPS4-217ENST00000496385 VASH2Q86V25 355 aa7.71□□□□□ -1.18
HPS4-217ENST00000496385 ZNF295-AS1Q8N0V1 137 aa7.71□□□□□ -1.18
HPS4-217ENST00000496385 OR10P1Q8NGE3 313 aa7.71□□□□□ -1.18
HPS4-217ENST00000496385 LSM10Q969L4 123 aaKnown RBP7.71□□□□□ -1.18
HPS4-217ENST00000496385 PSENENQ9NZ42 101 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms