RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 C11orf54Q9H0W9 315 aaPredicted RBP13.05□□□□□ -0.32
SF3A1-209ENST00000496189 IGKV1D-8A0A087WSZ0 117 aa13.04□□□□□ -0.32
SF3A1-209ENST00000496189 SULT1C2O00338 296 aa13.04□□□□□ -0.32
SF3A1-209ENST00000496189 CTDSP2O14595 271 aa13.04□□□□□ -0.32
SF3A1-209ENST00000496189 HLA-DQB1P01920 261 aa13.04□□□□□ -0.32
SF3A1-209ENST00000496189 PTHLHP12272 177 aa13.04□□□□□ -0.32
SF3A1-209ENST00000496189 GPR12P47775 334 aa13.04□□□□□ -0.32
SF3A1-209ENST00000496189 KRTAP10-3P60369 221 aa13.04□□□□□ -0.32
SF3A1-209ENST00000496189 TREML4Q6UXN2 200 aa13.04□□□□□ -0.32
SF3A1-209ENST00000496189 ZNF833PQ6ZTB9 187 aa13.04□□□□□ -0.32
SF3A1-209ENST00000496189 SNX29P2Q8IUI4 249 aa13.04□□□□□ -0.32
SF3A1-209ENST00000496189 FOXRED2Q8IWF2 684 aa13.04□□□□□ -0.32
SF3A1-209ENST00000496189 LAX1Q8IWV1 398 aa13.04□□□□□ -0.32
SF3A1-209ENST00000496189 C5orf56Q8N8D9 126 aa13.04□□□□□ -0.32
SF3A1-209ENST00000496189 C11orf44Q8N8P7 122 aa13.04□□□□□ -0.32
SF3A1-209ENST00000496189 OR4X2Q8NGF9 303 aa13.04□□□□□ -0.32
SF3A1-209ENST00000496189 ZNF251Q9BRH9 671 aa13.04□□□□□ -0.32
SF3A1-209ENST00000496189 DCUN1D5Q9BTE7 237 aa13.04□□□□□ -0.32
SF3A1-209ENST00000496189 IFI27L2Q9H2X8 130 aa13.04□□□□□ -0.32
SF3A1-209ENST00000496189 LIN7CQ9NUP9 197 aaKnown RBP13.04□□□□□ -0.32
SF3A1-209ENST00000496189 NECAP2Q9NVZ3 263 aa13.04□□□□□ -0.32
SF3A1-209ENST00000496189 CSF1P09603 554 aa13.03□□□□□ -0.32
SF3A1-209ENST00000496189 MC5RP33032 325 aa13.03□□□□□ -0.32
SF3A1-209ENST00000496189 OR3A3P47888 321 aa13.03□□□□□ -0.32
SF3A1-209ENST00000496189 MMDQ15546 238 aa13.03□□□□□ -0.32
SF3A1-209ENST00000496189 TMEM95Q3KNT9 176 aa13.03□□□□□ -0.32
SF3A1-209ENST00000496189 SLC35E3Q7Z769 313 aa13.03□□□□□ -0.32
SF3A1-209ENST00000496189 GVQW1Q8N7I0 195 aa13.03□□□□□ -0.32
SF3A1-209ENST00000496189 DIRAS2Q96HU8 199 aa13.03□□□□□ -0.32
SF3A1-209ENST00000496189 MRPL20Q9BYC9 149 aaKnown RBP13.03□□□□□ -0.32
SF3A1-209ENST00000496189 MMP27Q9H306 513 aa13.03□□□□□ -0.32
SF3A1-209ENST00000496189 KIAA1456Q9P272 454 aa13.03□□□□□ -0.32
SF3A1-209ENST00000496189 DPPA5A6NC42 116 aa13.02□□□□□ -0.33
SF3A1-209ENST00000496189 MEIS3P1A6NDR6 274 aa13.02□□□□□ -0.33
SF3A1-209ENST00000496189 OR5H14A6NHG9 310 aa13.02□□□□□ -0.33
SF3A1-209ENST00000496189 KCNAB3O43448 404 aa13.02□□□□□ -0.33
SF3A1-209ENST00000496189 OPN1MWP04001 364 aa13.02□□□□□ -0.33
SF3A1-209ENST00000496189 OPN1MW2P0DN77 364 aa13.02□□□□□ -0.33
SF3A1-209ENST00000496189 OPN1MW3P0DN78 364 aa13.02□□□□□ -0.33
SF3A1-209ENST00000496189 S100A5P33763 92 aa13.02□□□□□ -0.33
SF3A1-209ENST00000496189 TAS2R46P59540 309 aa13.02□□□□□ -0.33
SF3A1-209ENST00000496189 SLC35B1P78383 322 aa13.02□□□□□ -0.33
SF3A1-209ENST00000496189 Q6ZS46 218 aa13.02□□□□□ -0.33
SF3A1-209ENST00000496189 ODF3L1Q8IXM7 274 aa13.02□□□□□ -0.33
SF3A1-209ENST00000496189 H1FOOQ8IZA3 346 aaPredicted RBP13.02□□□□□ -0.33
SF3A1-209ENST00000496189 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.02□□□□□ -0.33
SF3A1-209ENST00000496189 OR5AU1Q8NGC0 362 aa13.02□□□□□ -0.33
SF3A1-209ENST00000496189 GPX8Q8TED1 209 aa13.02□□□□□ -0.33
SF3A1-209ENST00000496189 CHPT1Q8WUD6 406 aa13.02□□□□□ -0.33
SF3A1-209ENST00000496189 ABHD14BQ96IU4 210 aa13.02□□□□□ -0.33
SF3A1-209ENST00000496189 NABP2Q9BQ15 211 aa13.02□□□□□ -0.33
SF3A1-209ENST00000496189 AGMATQ9BSE5 352 aa13.02□□□□□ -0.33
SF3A1-209ENST00000496189 GON7Q9BXV9 100 aa13.02□□□□□ -0.33
SF3A1-209ENST00000496189 WNT10AQ9GZT5 417 aa13.02□□□□□ -0.33
SF3A1-209ENST00000496189 NXF2Q9GZY0 626 aaKnown RBP13.02□□□□□ -0.33
SF3A1-209ENST00000496189 MIXL1Q9H2W2 232 aa13.02□□□□□ -0.33
SF3A1-209ENST00000496189 RNF150Q9ULK6 438 aa13.02□□□□□ -0.33
SF3A1-209ENST00000496189 A3GALT2U3KPV4 340 aa13.02□□□□□ -0.33
SF3A1-209ENST00000496189 TET2Q6N021 2002 aaPredicted RBP13.01□□□□□ -0.33
SF3A1-209ENST00000496189 SH2D7A6NKC9 451 aaPredicted RBP13.01□□□□□ -0.33
SF3A1-209ENST00000496189 H7C2Y5 167 aa13.01□□□□□ -0.33
SF3A1-209ENST00000496189 APOA2P02652 100 aa13.01□□□□□ -0.33
SF3A1-209ENST00000496189 AMY1AP04745 511 aa13.01□□□□□ -0.33
SF3A1-209ENST00000496189 AMY2AP04746 511 aa13.01□□□□□ -0.33
SF3A1-209ENST00000496189 OR8U9P0C7N5 309 aa13.01□□□□□ -0.33
SF3A1-209ENST00000496189 MRPS10P82664 201 aaKnown RBP13.01□□□□□ -0.33
SF3A1-209ENST00000496189 CBX3Q13185 183 aa13.01□□□□□ -0.33
SF3A1-209ENST00000496189 FBLN7Q53RD9 439 aa13.01□□□□□ -0.33
SF3A1-209ENST00000496189 RPL39P5Q59GN2 51 aa13.01□□□□□ -0.33
SF3A1-209ENST00000496189 Q8N6K4 173 aa13.01□□□□□ -0.33
SF3A1-209ENST00000496189 OR5AP2Q8NGF4 316 aa13.01□□□□□ -0.33
SF3A1-209ENST00000496189 OR8U1Q8NH10 309 aa13.01□□□□□ -0.33
SF3A1-209ENST00000496189 FCAMRQ8WWV6 532 aa13.01□□□□□ -0.33
SF3A1-209ENST00000496189 PARP12Q9H0J9 701 aaKnown RBP13.01□□□□□ -0.33
SF3A1-209ENST00000496189 OR2W1Q9Y3N9 320 aa13.01□□□□□ -0.33
SF3A1-209ENST00000496189 FBN3Q75N90 2809 aa13.01□□□□□ -0.33
SF3A1-209ENST00000496189 PSMB11A5LHX3 300 aa13□□□□□ -0.33
SF3A1-209ENST00000496189 ZNF736B4DX44 427 aaPredicted RBP13□□□□□ -0.33
SF3A1-209ENST00000496189 RBBP9O75884 186 aa13□□□□□ -0.33
SF3A1-209ENST00000496189 SLC22A5O76082 557 aa13□□□□□ -0.33
SF3A1-209ENST00000496189 FCER2P06734 321 aa13□□□□□ -0.33
SF3A1-209ENST00000496189 NAT1P18440 290 aa13□□□□□ -0.33
SF3A1-209ENST00000496189 RCVRNP35243 200 aa13□□□□□ -0.33
SF3A1-209ENST00000496189 LUMP51884 338 aaPredicted RBP13□□□□□ -0.33
SF3A1-209ENST00000496189 ACTBP60709 375 aa13□□□□□ -0.33
SF3A1-209ENST00000496189 IL18Q14116 193 aa13□□□□□ -0.33
SF3A1-209ENST00000496189 CDK10Q15131 360 aa13□□□□□ -0.33
SF3A1-209ENST00000496189 PYHIN1Q6K0P9 492 aa13□□□□□ -0.33
SF3A1-209ENST00000496189 OR5H2Q8NGV7 314 aa13□□□□□ -0.33
SF3A1-209ENST00000496189 SNAPC3Q92966 411 aa13□□□□□ -0.33
SF3A1-209ENST00000496189 OR2D2Q9H210 308 aa13□□□□□ -0.33
SF3A1-209ENST00000496189 ANAPC10Q9UM13 185 aa13□□□□□ -0.33
SF3A1-209ENST00000496189 GAB2Q9UQC2 676 aa13□□□□□ -0.33
SF3A1-209ENST00000496189 WASHC3Q9Y3C0 194 aa13□□□□□ -0.33
SF3A1-209ENST00000496189 AP4M1O00189 453 aa12.99□□□□□ -0.33
SF3A1-209ENST00000496189 NBR2O15453 112 aa12.99□□□□□ -0.33
SF3A1-209ENST00000496189 IGHG2P01859 326 aa12.99□□□□□ -0.33
SF3A1-209ENST00000496189 OR5H8P0DN80 308 aa12.99□□□□□ -0.33
SF3A1-209ENST00000496189 CD28P10747 220 aa12.99□□□□□ -0.33
SF3A1-209ENST00000496189 NFYAP23511 347 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms