RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 KIAA0141Q14154 515 aaPredicted RBP9.94□□□□□ -0.82
PTPRF-214ENST00000496043 TBCEQ15813 527 aaPredicted RBP9.94□□□□□ -0.82
PTPRF-214ENST00000496043 PLAC9Q5JTB6 97 aa9.94□□□□□ -0.82
PTPRF-214ENST00000496043 C9orf66Q5T8R8 295 aa9.94□□□□□ -0.82
PTPRF-214ENST00000496043 HES5Q5TA89 166 aa9.94□□□□□ -0.82
PTPRF-214ENST00000496043 GLDNQ6ZMI3 551 aaPredicted RBP9.94□□□□□ -0.82
PTPRF-214ENST00000496043 MINDY2Q8NBR6 621 aa9.94□□□□□ -0.82
PTPRF-214ENST00000496043 OR11H1Q8NG94 326 aa9.94□□□□□ -0.82
PTPRF-214ENST00000496043 OR1N2Q8NGR9 330 aa9.94□□□□□ -0.82
PTPRF-214ENST00000496043 PARP12Q9H0J9 701 aaKnown RBP9.94□□□□□ -0.82
PTPRF-214ENST00000496043 KLK15Q9H2R5 256 aa9.94□□□□□ -0.82
PTPRF-214ENST00000496043 FBXL15Q9H469 300 aa9.94□□□□□ -0.82
PTPRF-214ENST00000496043 RAB26Q9ULW5 256 aa9.94□□□□□ -0.82
PTPRF-214ENST00000496043 WASHC3Q9Y3C0 194 aa9.94□□□□□ -0.82
PTPRF-214ENST00000496043 TRDV1A0A1B0GX56 115 aa9.93□□□□□ -0.82
PTPRF-214ENST00000496043 FCN1O00602 326 aa9.93□□□□□ -0.82
PTPRF-214ENST00000496043 SERPINB10P48595 397 aa9.93□□□□□ -0.82
PTPRF-214ENST00000496043 RPS16P62249 146 aaKnown RBP9.93□□□□□ -0.82
PTPRF-214ENST00000496043 RUNX1Q01196 453 aa9.93□□□□□ -0.82
PTPRF-214ENST00000496043 SSX1Q16384 188 aa9.93□□□□□ -0.82
PTPRF-214ENST00000496043 OR4A4PQ8NGN8 299 aa9.93□□□□□ -0.82
PTPRF-214ENST00000496043 MYOZ3Q8TDC0 251 aa9.93□□□□□ -0.82
PTPRF-214ENST00000496043 RAB3CQ96E17 227 aa9.93□□□□□ -0.82
PTPRF-214ENST00000496043 NUBP2Q9Y5Y2 271 aa9.93□□□□□ -0.82
PTPRF-214ENST00000496043 DNAH3Q8TD57 4116 aa9.92□□□□□ -0.82
PTPRF-214ENST00000496043 IGKV1-6A0A0C4DH72 117 aa9.92□□□□□ -0.82
PTPRF-214ENST00000496043 METTL21EPA6NDL7 271 aa9.92□□□□□ -0.82
PTPRF-214ENST00000496043 IFITM5A6NNB3 132 aa9.92□□□□□ -0.82
PTPRF-214ENST00000496043 SEC14L6B5MCN3 397 aa9.92□□□□□ -0.82
PTPRF-214ENST00000496043 I3L521 148 aa9.92□□□□□ -0.82
PTPRF-214ENST00000496043 MRPS14O60783 128 aaKnown RBP9.92□□□□□ -0.82
PTPRF-214ENST00000496043 PROP1O75360 226 aa9.92□□□□□ -0.82
PTPRF-214ENST00000496043 RAB3BP20337 219 aa9.92□□□□□ -0.82
PTPRF-214ENST00000496043 GADD45AP24522 165 aa9.92□□□□□ -0.82
PTPRF-214ENST00000496043 MYL9P24844 172 aa9.92□□□□□ -0.82
PTPRF-214ENST00000496043 CRIP2P52943 208 aaPredicted RBP9.92□□□□□ -0.82
PTPRF-214ENST00000496043 PLA2G7Q13093 441 aa9.92□□□□□ -0.82
PTPRF-214ENST00000496043 VAX1Q5SQQ9 334 aa9.92□□□□□ -0.82
PTPRF-214ENST00000496043 CD200R1LQ6Q8B3 271 aa9.92□□□□□ -0.82
PTPRF-214ENST00000496043 ZNF562Q6V9R5 426 aa9.92□□□□□ -0.82
PTPRF-214ENST00000496043 TCTEX1D1Q8N7M0 179 aa9.92□□□□□ -0.82
PTPRF-214ENST00000496043 DRAXINQ8NBI3 349 aaPredicted RBP9.92□□□□□ -0.82
PTPRF-214ENST00000496043 OR10R2Q8NGX6 335 aa9.92□□□□□ -0.82
PTPRF-214ENST00000496043 CLCC1Q96S66 551 aa9.92□□□□□ -0.82
PTPRF-214ENST00000496043 TSNAXQ99598 290 aaKnown RBP9.92□□□□□ -0.82
PTPRF-214ENST00000496043 TOLLIPQ9H0E2 274 aa9.92□□□□□ -0.82
PTPRF-214ENST00000496043 GNB4Q9HAV0 340 aa9.92□□□□□ -0.82
PTPRF-214ENST00000496043 RDH8Q9NYR8 311 aa9.92□□□□□ -0.82
PTPRF-214ENST00000496043 GAB2Q9UQC2 676 aa9.92□□□□□ -0.82
PTPRF-214ENST00000496043 KCNK7Q9Y2U2 307 aa9.92□□□□□ -0.82
PTPRF-214ENST00000496043 A0A1W2PN81 502 aa9.91□□□□□ -0.82
PTPRF-214ENST00000496043 BET1O15155 118 aa9.91□□□□□ -0.82
PTPRF-214ENST00000496043 FABP7O15540 132 aa9.91□□□□□ -0.82
PTPRF-214ENST00000496043 TFAP2AP05549 437 aa9.91□□□□□ -0.82
PTPRF-214ENST00000496043 OR8U8P0C7N1 319 aa9.91□□□□□ -0.82
PTPRF-214ENST00000496043 EGR2P11161 476 aaPredicted RBP9.91□□□□□ -0.82
PTPRF-214ENST00000496043 RAB6AP20340 208 aa9.91□□□□□ -0.82
PTPRF-214ENST00000496043 GALP22466 123 aa9.91□□□□□ -0.82
PTPRF-214ENST00000496043 CD40LGP29965 261 aa9.91□□□□□ -0.82
PTPRF-214ENST00000496043 CHRNA7P36544 502 aa9.91□□□□□ -0.82
PTPRF-214ENST00000496043 LUMP51884 338 aaPredicted RBP9.91□□□□□ -0.82
PTPRF-214ENST00000496043 OR10A3P58181 314 aa9.91□□□□□ -0.82
PTPRF-214ENST00000496043 CD69Q07108 199 aa9.91□□□□□ -0.82
PTPRF-214ENST00000496043 ZNF616Q08AN1 781 aa9.91□□□□□ -0.82
PTPRF-214ENST00000496043 FHL3Q13643 280 aa9.91□□□□□ -0.82
PTPRF-214ENST00000496043 PSG5Q15238 335 aa9.91□□□□□ -0.82
PTPRF-214ENST00000496043 ECSCRQ19T08 205 aa9.91□□□□□ -0.82
PTPRF-214ENST00000496043 ZNF260Q3ZCT1 412 aa9.91□□□□□ -0.82
PTPRF-214ENST00000496043 AKIRIN2Q53H80 203 aa9.91□□□□□ -0.82
PTPRF-214ENST00000496043 PPP1R27Q86WC6 154 aa9.91□□□□□ -0.82
PTPRF-214ENST00000496043 ZNF383Q8NA42 475 aa9.91□□□□□ -0.82
PTPRF-214ENST00000496043 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.91□□□□□ -0.82
PTPRF-214ENST00000496043 OR10J5Q8NHC4 309 aa9.91□□□□□ -0.82
PTPRF-214ENST00000496043 ABHD5Q8WTS1 349 aa9.91□□□□□ -0.82
PTPRF-214ENST00000496043 FLYWCH2Q96CP2 140 aaKnown RBP9.91□□□□□ -0.82
PTPRF-214ENST00000496043 OR5B12Q96R08 314 aa9.91□□□□□ -0.82
PTPRF-214ENST00000496043 CENPOQ9BU64 300 aa9.91□□□□□ -0.82
PTPRF-214ENST00000496043 NDUFB11Q9NX14 153 aa9.91□□□□□ -0.82
PTPRF-214ENST00000496043 METTL1Q9UBP6 276 aaKnown RBP9.91□□□□□ -0.82
PTPRF-214ENST00000496043 SCOCQ9UIL1 159 aa9.91□□□□□ -0.82
PTPRF-214ENST00000496043 FOXA2Q9Y261 457 aaPredicted RBP9.91□□□□□ -0.82
PTPRF-214ENST00000496043 A3GALT2U3KPV4 340 aa9.91□□□□□ -0.82
PTPRF-214ENST00000496043 SHISA3A0PJX4 238 aa9.9□□□□□ -0.82
PTPRF-214ENST00000496043 M0R1X1 148 aa9.9□□□□□ -0.82
PTPRF-214ENST00000496043 APOA2P02652 100 aa9.9□□□□□ -0.82
PTPRF-214ENST00000496043 OR8U9P0C7N5 309 aa9.9□□□□□ -0.82
PTPRF-214ENST00000496043 GSTT2P0CG29 244 aa9.9□□□□□ -0.82
PTPRF-214ENST00000496043 GSTT2BP0CG30 244 aa9.9□□□□□ -0.82
PTPRF-214ENST00000496043 GNB3P16520 340 aa9.9□□□□□ -0.82
PTPRF-214ENST00000496043 TALDO1P37837 337 aa9.9□□□□□ -0.82
PTPRF-214ENST00000496043 ECI1P42126 302 aa9.9□□□□□ -0.82
PTPRF-214ENST00000496043 INSL3P51460 131 aa9.9□□□□□ -0.82
PTPRF-214ENST00000496043 GABARAPL2P60520 117 aa9.9□□□□□ -0.82
PTPRF-214ENST00000496043 MOGAT2Q3SYC2 334 aa9.9□□□□□ -0.82
PTPRF-214ENST00000496043 C19orf54Q5BKX5 351 aa9.9□□□□□ -0.82
PTPRF-214ENST00000496043 IGSF11Q5DX21 431 aa9.9□□□□□ -0.82
PTPRF-214ENST00000496043 UNQ5815/PRO19632Q6UWF5 114 aa9.9□□□□□ -0.82
PTPRF-214ENST00000496043 PDPNQ86YL7 162 aa9.9□□□□□ -0.82
PTPRF-214ENST00000496043 B9D2Q9BPU9 175 aa9.9□□□□□ -0.82
PTPRF-214ENST00000496043 YTHDF1Q9BYJ9 559 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms