RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 SESN1Q9Y6P5 492 aa13.51□□□□□ -0.25
CBX4-204ENST00000495122 NKX6-3A6NJ46 265 aa13.5□□□□□ -0.25
CBX4-204ENST00000495122 NUDT19A8MXV4 375 aa13.5□□□□□ -0.25
CBX4-204ENST00000495122 C3orf80F5H4A9 247 aa13.5□□□□□ -0.25
CBX4-204ENST00000495122 YPEL1O60688 119 aa13.5□□□□□ -0.25
CBX4-204ENST00000495122 SCGB1D2O95969 90 aa13.5□□□□□ -0.25
CBX4-204ENST00000495122 OR8U9P0C7N5 309 aa13.5□□□□□ -0.25
CBX4-204ENST00000495122 C5orf24Q7Z6I8 188 aa13.5□□□□□ -0.25
CBX4-204ENST00000495122 EIF4E3Q8N5X7 224 aaKnown RBP13.5□□□□□ -0.25
CBX4-204ENST00000495122 OR8U1Q8NH10 309 aa13.5□□□□□ -0.25
CBX4-204ENST00000495122 PLPPR2Q96GM1 343 aa13.5□□□□□ -0.25
CBX4-204ENST00000495122 YPEL2Q96QA6 119 aa13.5□□□□□ -0.25
CBX4-204ENST00000495122 HSD17B10Q99714 261 aaKnown RBP13.5□□□□□ -0.25
CBX4-204ENST00000495122 SLC25A31Q9H0C2 315 aa13.5□□□□□ -0.25
CBX4-204ENST00000495122 COA4Q9NYJ1 87 aa13.5□□□□□ -0.25
CBX4-204ENST00000495122 METRNQ9UJH8 293 aa13.5□□□□□ -0.25
CBX4-204ENST00000495122 GAB2Q9UQC2 676 aa13.5□□□□□ -0.25
CBX4-204ENST00000495122 FN1P02751 2386 aaKnown RBP13.5□□□□□ -0.25
CBX4-204ENST00000495122 BORCS7-ASMTA0A0B4J1R7 106 aa13.49□□□□□ -0.25
CBX4-204ENST00000495122 TRAV39A0A0B4J263 110 aa13.49□□□□□ -0.25
CBX4-204ENST00000495122 TRAV38-1A0A0B4J264 116 aa13.49□□□□□ -0.25
CBX4-204ENST00000495122 MSGN1A6NI15 193 aa13.49□□□□□ -0.25
CBX4-204ENST00000495122 SHISA9B4DS77 424 aa13.49□□□□□ -0.25
CBX4-204ENST00000495122 B9A039 149 aa13.49□□□□□ -0.25
CBX4-204ENST00000495122 FAM90A26D6RGX4 464 aa13.49□□□□□ -0.25
CBX4-204ENST00000495122 LGALS8O00214 317 aa13.49□□□□□ -0.25
CBX4-204ENST00000495122 ADAM20O43506 726 aa13.49□□□□□ -0.25
CBX4-204ENST00000495122 PLAUP00749 431 aa13.49□□□□□ -0.25
CBX4-204ENST00000495122 APOBEC3AP31941 199 aaPredicted RBP13.49□□□□□ -0.25
CBX4-204ENST00000495122 ID3Q02535 119 aa13.49□□□□□ -0.25
CBX4-204ENST00000495122 EIF4EBP1Q13541 118 aaPredicted RBP13.49□□□□□ -0.25
CBX4-204ENST00000495122 PRSS57Q6UWY2 283 aa13.49□□□□□ -0.25
CBX4-204ENST00000495122 ZNF788Q6ZQV5 615 aa13.49□□□□□ -0.25
CBX4-204ENST00000495122 HSD17B13Q7Z5P4 300 aaPredicted RBP13.49□□□□□ -0.25
CBX4-204ENST00000495122 UBAC2Q8NBM4 344 aa13.49□□□□□ -0.25
CBX4-204ENST00000495122 OR52M1Q8NGK5 317 aa13.49□□□□□ -0.25
CBX4-204ENST00000495122 CD300LFQ8TDQ1 290 aa13.49□□□□□ -0.25
CBX4-204ENST00000495122 CORO2AQ92828 525 aa13.49□□□□□ -0.25
CBX4-204ENST00000495122 PERPQ96FX8 193 aa13.49□□□□□ -0.25
CBX4-204ENST00000495122 C11orf1Q9H5F2 150 aa13.49□□□□□ -0.25
CBX4-204ENST00000495122 LINC00574Q9H8X3 128 aa13.49□□□□□ -0.25
CBX4-204ENST00000495122 OR2S2Q9NQN1 319 aa13.49□□□□□ -0.25
CBX4-204ENST00000495122 LPAR3Q9UBY5 353 aa13.49□□□□□ -0.25
CBX4-204ENST00000495122 SIGLEC5O15389 551 aa13.48□□□□□ -0.25
CBX4-204ENST00000495122 FGF16O43320 207 aa13.48□□□□□ -0.25
CBX4-204ENST00000495122 PITX3O75364 302 aa13.48□□□□□ -0.25
CBX4-204ENST00000495122 CD80P33681 288 aa13.48□□□□□ -0.25
CBX4-204ENST00000495122 RAB7AP51149 207 aa13.48□□□□□ -0.25
CBX4-204ENST00000495122 ARHGDIBP52566 201 aa13.48□□□□□ -0.25
CBX4-204ENST00000495122 BAXQ07812 192 aa13.48□□□□□ -0.25
CBX4-204ENST00000495122 BOLLQ8N9W6 283 aaKnown RBP13.48□□□□□ -0.25
CBX4-204ENST00000495122 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.48□□□□□ -0.25
CBX4-204ENST00000495122 OR10A7Q8NGE5 316 aa13.48□□□□□ -0.25
CBX4-204ENST00000495122 OR51H1Q8NH63 302 aa13.48□□□□□ -0.25
CBX4-204ENST00000495122 RNF141Q8WVD5 230 aa13.48□□□□□ -0.25
CBX4-204ENST00000495122 Q96MF0 132 aa13.48□□□□□ -0.25
CBX4-204ENST00000495122 CITED4Q96RK1 184 aa13.48□□□□□ -0.25
CBX4-204ENST00000495122 OR2D2Q9H210 308 aa13.48□□□□□ -0.25
CBX4-204ENST00000495122 RCL1Q9Y2P8 373 aaKnown RBP13.48□□□□□ -0.25
CBX4-204ENST00000495122 TRGV10A0A0A0MS01 117 aa13.47□□□□□ -0.25
CBX4-204ENST00000495122 ZNF729A6NN14 1252 aaPredicted RBP13.47□□□□□ -0.25
CBX4-204ENST00000495122 TNFSF12O43508 249 aa13.47□□□□□ -0.25
CBX4-204ENST00000495122 FSTL3O95633 263 aa13.47□□□□□ -0.25
CBX4-204ENST00000495122 CGB3P0DN86 165 aa13.47□□□□□ -0.25
CBX4-204ENST00000495122 CGB7P0DN87 165 aa13.47□□□□□ -0.25
CBX4-204ENST00000495122 PAX1P15863 534 aa13.47□□□□□ -0.25
CBX4-204ENST00000495122 VAMP2P63027 116 aa13.47□□□□□ -0.25
CBX4-204ENST00000495122 MEF2CQ06413 473 aaPredicted RBP13.47□□□□□ -0.25
CBX4-204ENST00000495122 FOXRED2Q8IWF2 684 aa13.47□□□□□ -0.25
CBX4-204ENST00000495122 CIARTQ8N365 385 aaPredicted RBP13.47□□□□□ -0.25
CBX4-204ENST00000495122 DMBX1Q8NFW5 382 aa13.47□□□□□ -0.25
CBX4-204ENST00000495122 OR52L2PQ8NGH6 319 aa13.47□□□□□ -0.25
CBX4-204ENST00000495122 RNASE11Q8TAA1 199 aaKnown RBP13.47□□□□□ -0.25
CBX4-204ENST00000495122 SAT2Q96F10 170 aaPredicted RBP13.47□□□□□ -0.25
CBX4-204ENST00000495122 GAFA1Q96PS6 74 aa13.47□□□□□ -0.25
CBX4-204ENST00000495122 RAB40CQ96S21 281 aa13.47□□□□□ -0.25
CBX4-204ENST00000495122 SAP30LQ9HAJ7 183 aa13.47□□□□□ -0.25
CBX4-204ENST00000495122 LYRM2Q9NU23 88 aaPredicted RBP13.47□□□□□ -0.25
CBX4-204ENST00000495122 CACFD1Q9UGQ2 172 aa13.47□□□□□ -0.25
CBX4-204ENST00000495122 RNF115Q9Y4L5 304 aa13.47□□□□□ -0.25
CBX4-204ENST00000495122 IGHV3OR15-7A0A075B7D8 119 aa13.46□□□□□ -0.25
CBX4-204ENST00000495122 WRBO00258 174 aa13.46□□□□□ -0.25
CBX4-204ENST00000495122 NDUFA2O43678 99 aa13.46□□□□□ -0.25
CBX4-204ENST00000495122 LY86O95711 162 aa13.46□□□□□ -0.25
CBX4-204ENST00000495122 SSTR5P35346 364 aa13.46□□□□□ -0.25
CBX4-204ENST00000495122 KIR2DS2P43631 304 aa13.46□□□□□ -0.25
CBX4-204ENST00000495122 TMEM33P57088 247 aa13.46□□□□□ -0.25
CBX4-204ENST00000495122 TAS2R30P59541 319 aa13.46□□□□□ -0.25
CBX4-204ENST00000495122 EDDM3AQ14507 147 aa13.46□□□□□ -0.25
CBX4-204ENST00000495122 Q3ZCU0 254 aa13.46□□□□□ -0.25
CBX4-204ENST00000495122 SPRNQ5BIV9 151 aa13.46□□□□□ -0.25
CBX4-204ENST00000495122 ADAM5Q6NVV9 412 aa13.46□□□□□ -0.25
CBX4-204ENST00000495122 CLEC9AQ6UXN8 241 aa13.46□□□□□ -0.25
CBX4-204ENST00000495122 OR2C3Q8N628 320 aa13.46□□□□□ -0.25
CBX4-204ENST00000495122 ARV1Q9H2C2 271 aa13.46□□□□□ -0.25
CBX4-204ENST00000495122 TAS2R3Q9NYW6 316 aa13.46□□□□□ -0.25
CBX4-204ENST00000495122 CALYQ9NYX4 217 aa13.46□□□□□ -0.25
CBX4-204ENST00000495122 FBXL17Q9UF56 701 aa13.46□□□□□ -0.25
CBX4-204ENST00000495122 MMP24Q9Y5R2 645 aa13.46□□□□□ -0.25
CBX4-204ENST00000495122 KBTBD11-OT1A0A1B0GTJ5 212 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms