RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 OR14A2Q96R54 314 aa10.86□□□□□ -0.67
VARS-228ENST00000495010 GHRLQ9UBU3 117 aa10.86□□□□□ -0.67
VARS-228ENST00000495010 PEF1Q9UBV8 284 aaKnown RBP10.86□□□□□ -0.67
VARS-228ENST00000495010 EXOSC1Q9Y3B2 195 aaKnown RBP10.86□□□□□ -0.67
VARS-228ENST00000495010 TPPPO94811 219 aa10.85□□□□□ -0.67
VARS-228ENST00000495010 SPDEFO95238 335 aa10.85□□□□□ -0.67
VARS-228ENST00000495010 AADACP22760 399 aa10.85□□□□□ -0.67
VARS-228ENST00000495010 CD81P60033 236 aa10.85□□□□□ -0.67
VARS-228ENST00000495010 NKAIN3Q8N8D7 197 aa10.85□□□□□ -0.67
VARS-228ENST00000495010 ZFP41Q8N8Y5 198 aa10.85□□□□□ -0.67
VARS-228ENST00000495010 APH1BQ8WW43 257 aa10.85□□□□□ -0.67
VARS-228ENST00000495010 CYYR1Q96J86 154 aa10.85□□□□□ -0.67
VARS-228ENST00000495010 SULT4A1Q9BR01 284 aa10.85□□□□□ -0.67
VARS-228ENST00000495010 FAAP24Q9BTP7 215 aa10.85□□□□□ -0.67
VARS-228ENST00000495010 C9orf16Q9BUW7 83 aa10.85□□□□□ -0.67
VARS-228ENST00000495010 HIPK2Q9H2X6 1198 aa10.85□□□□□ -0.67
VARS-228ENST00000495010 PLEKHA3Q9HB20 300 aa10.85□□□□□ -0.67
VARS-228ENST00000495010 PEMTQ9UBM1 199 aa10.85□□□□□ -0.67
VARS-228ENST00000495010 TRBV5-7A0A0A0MS05 114 aa10.84□□□□□ -0.67
VARS-228ENST00000495010 APOA2P02652 100 aa10.84□□□□□ -0.67
VARS-228ENST00000495010 CSN3P07498 182 aa10.84□□□□□ -0.67
VARS-228ENST00000495010 LGALS7P47929 136 aa10.84□□□□□ -0.67
VARS-228ENST00000495010 SMN1Q16637 294 aaKnown RBP10.84□□□□□ -0.67
VARS-228ENST00000495010 IL34Q6ZMJ4 242 aa10.84□□□□□ -0.67
VARS-228ENST00000495010 DRAXINQ8NBI3 349 aaPredicted RBP10.84□□□□□ -0.67
VARS-228ENST00000495010 OR2K2Q8NGT1 345 aa10.84□□□□□ -0.67
VARS-228ENST00000495010 EDARADDQ8WWZ3 215 aa10.84□□□□□ -0.67
VARS-228ENST00000495010 TMEM68Q96MH6 324 aa10.84□□□□□ -0.67
VARS-228ENST00000495010 UQCC2Q9BRT2 126 aa10.84□□□□□ -0.67
VARS-228ENST00000495010 SLC2A8Q9NY64 477 aa10.84□□□□□ -0.67
VARS-228ENST00000495010 SIGLEC8Q9NYZ4 499 aa10.84□□□□□ -0.67
VARS-228ENST00000495010 ZNF221Q9UK13 617 aa10.84□□□□□ -0.67
VARS-228ENST00000495010 TNCP24821 2201 aa10.84□□□□□ -0.67
VARS-228ENST00000495010 A0A0B4J203 849 aa10.83□□□□□ -0.68
VARS-228ENST00000495010 LALBAP00709 142 aa10.83□□□□□ -0.68
VARS-228ENST00000495010 UBBP0CG47 229 aa10.83□□□□□ -0.68
VARS-228ENST00000495010 ZBTB25P24278 435 aa10.83□□□□□ -0.68
VARS-228ENST00000495010 CEACAM6P40199 344 aa10.83□□□□□ -0.68
VARS-228ENST00000495010 RPS11P62280 158 aaKnown RBP eCLIP10.83□□□□□ -0.68
VARS-228ENST00000495010 RNLSQ5VYX0 342 aa10.83□□□□□ -0.68
VARS-228ENST00000495010 ZFP1Q6P2D0 407 aa10.83□□□□□ -0.68
VARS-228ENST00000495010 MOB1BQ7L9L4 216 aa10.83□□□□□ -0.68
VARS-228ENST00000495010 C6orf201Q7Z4U5 140 aa10.83□□□□□ -0.68
VARS-228ENST00000495010 PDPNQ86YL7 162 aa10.83□□□□□ -0.68
VARS-228ENST00000495010 SVOPQ8N4V2 548 aa10.83□□□□□ -0.68
VARS-228ENST00000495010 BVESQ8NE79 360 aa10.83□□□□□ -0.68
VARS-228ENST00000495010 ZNF555Q8NEP9 628 aa10.83□□□□□ -0.68
VARS-228ENST00000495010 SLC29A1Q99808 456 aa10.83□□□□□ -0.68
VARS-228ENST00000495010 NEURL2Q9BR09 285 aa10.83□□□□□ -0.68
VARS-228ENST00000495010 THAP7Q9BT49 309 aaPredicted RBP10.83□□□□□ -0.68
VARS-228ENST00000495010 COA4Q9NYJ1 87 aa10.83□□□□□ -0.68
VARS-228ENST00000495010 DIMT1Q9UNQ2 313 aaKnown RBP10.83□□□□□ -0.68
VARS-228ENST00000495010 PNMA8CA0A1B0GUJ8 204 aa10.82□□□□□ -0.68
VARS-228ENST00000495010 IZUMO1RA6ND01 250 aa10.82□□□□□ -0.68
VARS-228ENST00000495010 H3BNX3 289 aa10.82□□□□□ -0.68
VARS-228ENST00000495010 DYNC1I1O14576 645 aa10.82□□□□□ -0.68
VARS-228ENST00000495010 ITGB1BP1O14713 200 aa10.82□□□□□ -0.68
VARS-228ENST00000495010 AIREO43918 545 aa10.82□□□□□ -0.68
VARS-228ENST00000495010 OR2A4O95047 310 aa10.82□□□□□ -0.68
VARS-228ENST00000495010 IGKV1-16P04430 117 aa10.82□□□□□ -0.68
VARS-228ENST00000495010 TAS2R43P59537 309 aa10.82□□□□□ -0.68
VARS-228ENST00000495010 THRSPQ92748 146 aa10.82□□□□□ -0.68
VARS-228ENST00000495010 SNAPC3Q92966 411 aa10.82□□□□□ -0.68
VARS-228ENST00000495010 TMEM80Q96HE8 168 aa10.82□□□□□ -0.68
VARS-228ENST00000495010 USMG5Q96IX5 58 aa10.82□□□□□ -0.68
VARS-228ENST00000495010 PGLYRP3Q96LB9 341 aa10.82□□□□□ -0.68
VARS-228ENST00000495010 DERL3Q96Q80 235 aa10.82□□□□□ -0.68
VARS-228ENST00000495010 PHB2Q99623 299 aa10.82□□□□□ -0.68
VARS-228ENST00000495010 TINAGL1Q9GZM7 467 aaPredicted RBP10.82□□□□□ -0.68
VARS-228ENST00000495010 PARP12Q9H0J9 701 aaKnown RBP10.82□□□□□ -0.68
VARS-228ENST00000495010 C11orf54Q9H0W9 315 aaPredicted RBP10.82□□□□□ -0.68
VARS-228ENST00000495010 PLEKHJ1Q9NW61 149 aa10.82□□□□□ -0.68
VARS-228ENST00000495010 CLEC2DQ9UHP7 191 aa10.82□□□□□ -0.68
VARS-228ENST00000495010 ADAM30Q9UKF2 790 aa10.82□□□□□ -0.68
VARS-228ENST00000495010 WBP4O75554 376 aaKnown RBP10.81□□□□□ -0.68
VARS-228ENST00000495010 LY6G6CO95867 125 aa10.81□□□□□ -0.68
VARS-228ENST00000495010 SNRPBP14678 240 aaKnown RBP10.81□□□□□ -0.68
VARS-228ENST00000495010 MAPK3P27361 379 aaPredicted RBP10.81□□□□□ -0.68
VARS-228ENST00000495010 RPS27AP62979 156 aaKnown RBP10.81□□□□□ -0.68
VARS-228ENST00000495010 DEFA5Q01523 94 aa10.81□□□□□ -0.68
VARS-228ENST00000495010 ZNF343Q6P1L6 599 aa10.81□□□□□ -0.68
VARS-228ENST00000495010 LINC00322Q6ZN03 302 aaPredicted RBP10.81□□□□□ -0.68
VARS-228ENST00000495010 LAX1Q8IWV1 398 aa10.81□□□□□ -0.68
VARS-228ENST00000495010 ZNF383Q8NA42 475 aa10.81□□□□□ -0.68
VARS-228ENST00000495010 DYNLRB2Q8TF09 96 aa10.81□□□□□ -0.68
VARS-228ENST00000495010 AGMATQ9BSE5 352 aa10.81□□□□□ -0.68
VARS-228ENST00000495010 TMEM59Q9BXS4 323 aa10.81□□□□□ -0.68
VARS-228ENST00000495010 RIMS4Q9H426 269 aaPredicted RBP10.81□□□□□ -0.68
VARS-228ENST00000495010 MGAT4AQ9UM21 535 aa10.81□□□□□ -0.68
VARS-228ENST00000495010 NAPSAO96009 420 aa10.8□□□□□ -0.68
VARS-228ENST00000495010 TRBV12-3P01733 135 aa10.8□□□□□ -0.68
VARS-228ENST00000495010 CBX3Q13185 183 aa10.8□□□□□ -0.68
VARS-228ENST00000495010 DYRK1AQ13627 763 aa10.8□□□□□ -0.68
VARS-228ENST00000495010 OR10K2Q6IF99 312 aa10.8□□□□□ -0.68
VARS-228ENST00000495010 ZNF880Q6PDB4 577 aa10.8□□□□□ -0.68
VARS-228ENST00000495010 DEFB125Q8N687 156 aa10.8□□□□□ -0.68
VARS-228ENST00000495010 KCNG3Q8TAE7 436 aa10.8□□□□□ -0.68
VARS-228ENST00000495010 KRTAP17-1Q9BYP8 105 aa10.8□□□□□ -0.68
VARS-228ENST00000495010 SRD5A3Q9H8P0 318 aa10.8□□□□□ -0.68
VARS-228ENST00000495010 SLC35D1Q9NTN3 355 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms