RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 FGFRL1Q8N441 504 aa12.94□□□□□ -0.34
SDF4-207ENST00000494748 ZNF114Q8NC26 417 aa12.94□□□□□ -0.34
SDF4-207ENST00000494748 PSMF1Q92530 271 aa12.94□□□□□ -0.34
SDF4-207ENST00000494748 NEIL1Q96FI4 390 aaPredicted RBP12.94□□□□□ -0.34
SDF4-207ENST00000494748 LRP5LA4QPB2 252 aa12.94□□□□□ -0.34
SDF4-207ENST00000494748 NGFP01138 241 aa12.94□□□□□ -0.34
SDF4-207ENST00000494748 GNB1P62873 340 aa12.94□□□□□ -0.34
SDF4-207ENST00000494748 NRN1LQ496H8 165 aa12.94□□□□□ -0.34
SDF4-207ENST00000494748 FAM78BQ5VT40 261 aa12.94□□□□□ -0.34
SDF4-207ENST00000494748 OR5A2Q8NGI9 324 aa12.94□□□□□ -0.34
SDF4-207ENST00000494748 KCNE4Q8WWG9 221 aa12.94□□□□□ -0.34
SDF4-207ENST00000494748 WDYHV1Q96HA8 205 aa12.94□□□□□ -0.34
SDF4-207ENST00000494748 IMMP2LQ96T52 175 aa12.94□□□□□ -0.34
SDF4-207ENST00000494748 TMPRSS2O15393 492 aa12.93□□□□□ -0.34
SDF4-207ENST00000494748 FOXG1P55316 489 aaPredicted RBP12.93□□□□□ -0.34
SDF4-207ENST00000494748 RELQ04864 619 aaPredicted RBP12.93□□□□□ -0.34
SDF4-207ENST00000494748 DRAM1Q8N682 238 aa12.93□□□□□ -0.34
SDF4-207ENST00000494748 EIF4EBP1Q13541 118 aaPredicted RBP12.93□□□□□ -0.34
SDF4-207ENST00000494748 TDRG1Q3Y452 100 aa12.93□□□□□ -0.34
SDF4-207ENST00000494748 DERL1Q9BUN8 251 aa12.93□□□□□ -0.34
SDF4-207ENST00000494748 LIN7CQ9NUP9 197 aaKnown RBP12.93□□□□□ -0.34
SDF4-207ENST00000494748 PPP1R14DQ9NXH3 145 aa12.93□□□□□ -0.34
SDF4-207ENST00000494748 MARCH11A6NNE9 402 aa12.93□□□□□ -0.34
SDF4-207ENST00000494748 RAMP3O60896 148 aa12.93□□□□□ -0.34
SDF4-207ENST00000494748 RHBDL1O75783 438 aa12.93□□□□□ -0.34
SDF4-207ENST00000494748 SCGB1D1O95968 90 aa12.93□□□□□ -0.34
SDF4-207ENST00000494748 CD99P14209 185 aa12.93□□□□□ -0.34
SDF4-207ENST00000494748 FFAR4Q5NUL3 377 aa12.93□□□□□ -0.34
SDF4-207ENST00000494748 NPCDR1Q9BY65 106 aa12.93□□□□□ -0.34
SDF4-207ENST00000494748 USF3Q68DE3 2245 aa12.93□□□□□ -0.34
SDF4-207ENST00000494748 VPS13AQ96RL7 3174 aa12.92□□□□□ -0.34
SDF4-207ENST00000494748 ZNF25P17030 456 aaPredicted RBP12.92□□□□□ -0.34
SDF4-207ENST00000494748 EGR1P18146 543 aa12.92□□□□□ -0.34
SDF4-207ENST00000494748 MPLP40238 635 aa12.92□□□□□ -0.34
SDF4-207ENST00000494748 BRWD1-AS2P59051 145 aa12.92□□□□□ -0.34
SDF4-207ENST00000494748 UBALD1Q8TB05 177 aa12.92□□□□□ -0.34
SDF4-207ENST00000494748 TMEM208Q9BTX3 173 aa12.92□□□□□ -0.34
SDF4-207ENST00000494748 TMEM147Q9BVK8 224 aa12.92□□□□□ -0.34
SDF4-207ENST00000494748 C5orf49A4QMS7 147 aa12.92□□□□□ -0.34
SDF4-207ENST00000494748 CLDN1O95832 211 aa12.92□□□□□ -0.34
SDF4-207ENST00000494748 TMEM45BQ96B21 275 aa12.92□□□□□ -0.34
SDF4-207ENST00000494748 AURKAIP1Q9NWT8 199 aaPredicted RBP12.92□□□□□ -0.34
SDF4-207ENST00000494748 ELOVL5Q9NYP7 299 aa12.92□□□□□ -0.34
SDF4-207ENST00000494748 CLN8Q9UBY8 286 aa12.92□□□□□ -0.34
SDF4-207ENST00000494748 RBFOX2O43251 390 aaKnown RBP eCLIP12.92□□□□□ -0.341e-6■■□□□ 14.5
SDF4-207ENST00000494748 C1QTNF9P0C862 333 aa12.92□□□□□ -0.34
SDF4-207ENST00000494748 CCNOP22674 350 aa12.92□□□□□ -0.34
SDF4-207ENST00000494748 OR10J1P30954 320 aa12.92□□□□□ -0.34
SDF4-207ENST00000494748 ARF1P84077 181 aaKnown RBP12.92□□□□□ -0.34
SDF4-207ENST00000494748 ZNF497Q6ZNH5 498 aa12.92□□□□□ -0.34
SDF4-207ENST00000494748 MRPL21Q7Z2W9 205 aaKnown RBP12.92□□□□□ -0.34
SDF4-207ENST00000494748 RPS19BP1Q86WX3 136 aaKnown RBP12.92□□□□□ -0.34
SDF4-207ENST00000494748 FAM58AQ8N1B3 248 aa12.92□□□□□ -0.34
SDF4-207ENST00000494748 DIRC2Q96SL1 478 aa12.92□□□□□ -0.34
SDF4-207ENST00000494748 TRAPPC1Q9Y5R8 145 aa12.92□□□□□ -0.34
SDF4-207ENST00000494748 TRBV20OR9-2A0A075B6H5 130 aa12.91□□□□□ -0.34
SDF4-207ENST00000494748 A6NNC1 897 aa12.91□□□□□ -0.34
SDF4-207ENST00000494748 C11orf94C9JXX5 98 aa12.91□□□□□ -0.34
SDF4-207ENST00000494748 WISP2O76076 250 aa12.91□□□□□ -0.34
SDF4-207ENST00000494748 ZNF16P17020 682 aaPredicted RBP12.91□□□□□ -0.34
SDF4-207ENST00000494748 CD33P20138 364 aa12.91□□□□□ -0.34
SDF4-207ENST00000494748 LHX2P50458 406 aa12.91□□□□□ -0.34
SDF4-207ENST00000494748 FOXL1Q12952 345 aa12.91□□□□□ -0.34
SDF4-207ENST00000494748 Q6ZWC4 215 aa12.91□□□□□ -0.34
SDF4-207ENST00000494748 TCF23Q7RTU1 214 aa12.91□□□□□ -0.34
SDF4-207ENST00000494748 AGBL5Q8NDL9 886 aa12.91□□□□□ -0.34
SDF4-207ENST00000494748 ZCCHC14Q8WYQ9 949 aaKnown RBP12.91□□□□□ -0.34
SDF4-207ENST00000494748 A0A096LPE4 126 aa12.91□□□□□ -0.34
SDF4-207ENST00000494748 A0A1W2PPZ6 126 aa12.91□□□□□ -0.34
SDF4-207ENST00000494748 ADMP35318 185 aa12.91□□□□□ -0.34
SDF4-207ENST00000494748 PMP22Q01453 160 aa12.91□□□□□ -0.34
SDF4-207ENST00000494748 WIPI1Q5MNZ9 446 aaPredicted RBP12.91□□□□□ -0.34
SDF4-207ENST00000494748 TPTE2P1Q5T6R2 138 aa12.91□□□□□ -0.34
SDF4-207ENST00000494748 KCNIP4Q6PIL6 250 aa12.91□□□□□ -0.34
SDF4-207ENST00000494748 ZNF573Q86YE8 665 aa12.91□□□□□ -0.34
SDF4-207ENST00000494748 PGPEP1LA6NFU8 196 aa12.91□□□□□ -0.34
SDF4-207ENST00000494748 DLEU1O43261 78 aa12.91□□□□□ -0.34
SDF4-207ENST00000494748 MBP02144 154 aa12.91□□□□□ -0.34
SDF4-207ENST00000494748 SFTPCP11686 197 aa12.91□□□□□ -0.34
SDF4-207ENST00000494748 ATP5G3P48201 142 aa12.91□□□□□ -0.34
SDF4-207ENST00000494748 TEX43Q6ZNM6 134 aa12.91□□□□□ -0.34
SDF4-207ENST00000494748 WDR1O75083 606 aa12.9□□□□□ -0.34
SDF4-207ENST00000494748 HPRT1P00492 218 aa12.9□□□□□ -0.34
SDF4-207ENST00000494748 NPSP0C0P6 89 aa12.9□□□□□ -0.34
SDF4-207ENST00000494748 SOX8P57073 446 aa12.9□□□□□ -0.34
SDF4-207ENST00000494748 UBE2NP61088 152 aaKnown RBP12.9□□□□□ -0.34
SDF4-207ENST00000494748 ATP6V1FQ16864 119 aa12.9□□□□□ -0.34
SDF4-207ENST00000494748 C21orf62-AS1Q17RA5 79 aa12.9□□□□□ -0.34
SDF4-207ENST00000494748 OR5T1Q8NG75 326 aa12.9□□□□□ -0.34
SDF4-207ENST00000494748 TBX15Q96SF7 602 aa12.9□□□□□ -0.34
SDF4-207ENST00000494748 DEPPQ9NTK1 212 aa12.9□□□□□ -0.34
SDF4-207ENST00000494748 CELSR3Q9NYQ7 3312 aa12.9□□□□□ -0.34
SDF4-207ENST00000494748 A0A0U1RQK1 487 aa12.9□□□□□ -0.34
SDF4-207ENST00000494748 ZNF320A2RRD8 509 aa12.9□□□□□ -0.34
SDF4-207ENST00000494748 CRYAAP02489 173 aa12.9□□□□□ -0.34
SDF4-207ENST00000494748 YPEL3P61236 119 aaPredicted RBP12.9□□□□□ -0.34
SDF4-207ENST00000494748 PPP1CBP62140 327 aa12.9□□□□□ -0.34
SDF4-207ENST00000494748 RPL30P62888 115 aaKnown RBP12.9□□□□□ -0.34
SDF4-207ENST00000494748 C9orf135Q5VTT2 229 aa12.9□□□□□ -0.34
SDF4-207ENST00000494748 PRR18Q8N4B5 295 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms