RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 MBPP02686 304 aaPredicted RBP5.57□□□□□ -1.52
MSH5-217ENST00000494458 PRB1P04280 392 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 MMP9P14780 707 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 C4BPBP20851 252 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 EFNA4P52798 201 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 RAB32Q13637 225 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 ZNF273Q14593 569 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 POU2AF1Q16633 256 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 PDLIM3Q53GG5 364 aaPredicted RBP5.57□□□□□ -1.52
MSH5-217ENST00000494458 TMEM268Q5VZI3 342 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 FAM71F2Q6NXP2 309 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 Q6ZRM9 215 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 C1orf122Q6ZSJ8 110 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 ZNF695Q8IW36 515 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 FAM219AQ8IW50 185 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 PRR18Q8N4B5 295 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 OR1S1Q8NH92 325 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 UBALD1Q8TB05 177 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 THAP6Q8TBB0 222 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 CD300LFQ8TDQ1 290 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 ST6GALNAC6Q969X2 333 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 GPR146Q96CH1 333 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 ZNF714Q96N38 554 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 GPHA2Q96T91 129 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 PDCD10Q9BUL8 212 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 MFFQ9GZY8 342 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 OR2D2Q9H210 308 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 GAL3ST2Q9H3Q3 398 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 PLEKHA2Q9HB19 425 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 PATZ1Q9HBE1 687 aaKnown RBP5.57□□□□□ -1.52
MSH5-217ENST00000494458 CYTL1Q9NRR1 136 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 LIN7CQ9NUP9 197 aaKnown RBP5.57□□□□□ -1.52
MSH5-217ENST00000494458 OR5AC2Q9NZP5 309 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 COMMD9Q9P000 198 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 MBD2Q9UBB5 411 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 MIOXQ9UGB7 285 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 RALYQ9UKM9 306 aaKnown RBP5.57□□□□□ -1.52
MSH5-217ENST00000494458 POLR3KQ9Y2Y1 108 aaPredicted RBP5.57□□□□□ -1.52
MSH5-217ENST00000494458 POMT1Q9Y6A1 747 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 ZFYVE26Q68DK2 2539 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 FLNCQ14315 2725 aa5.57□□□□□ -1.52
MSH5-217ENST00000494458 IGHV3-43A0A0B4J1X8 118 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 C13orf42A0A1B0GVH6 325 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 FAM90A26D6RGX4 464 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 LYNX1G3V0Z9 82 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 K7EPK0 472 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 L7N2F9 121 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 RAB29O14966 203 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 SLC31A2O15432 143 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 ARPC5O15511 151 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 TNFSF12O43508 249 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 CLDN1O95832 211 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 CFDP00746 253 aaPredicted RBP5.56□□□□□ -1.52
MSH5-217ENST00000494458 SERPINE2P07093 398 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 PET100P0DJ07 73 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 IGHV3-43DP0DP04 118 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 LYNX1P0DP58 116 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 HKR1P10072 659 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 DAOP14920 347 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 PAX2Q02962 417 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 CATR1Q13166 79 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 MIDNQ504T8 468 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 GPR157Q5UAW9 335 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 WDR25Q64LD2 544 aaPredicted RBP5.56□□□□□ -1.52
MSH5-217ENST00000494458 NCR3LG1Q68D85 454 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 MEX3BQ6ZN04 569 aaKnown RBP5.56□□□□□ -1.52
MSH5-217ENST00000494458 ZNF833PQ6ZTB9 187 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 SLC51BQ86UW2 128 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 FAM71E2Q8N5Q1 922 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 ZNF680Q8NEM1 530 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 STOML3Q8TAV4 291 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 RAB1CQ92928 201 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 TNFRSF14Q92956 283 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 SPIN2AQ99865 258 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 SPIN2BQ9BPZ2 258 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 ABHD14AQ9BUJ0 271 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 UNKLQ9H9P5 680 aaKnown RBP5.56□□□□□ -1.52
MSH5-217ENST00000494458 GNG12Q9UBI6 72 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 RNF150Q9ULK6 438 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 PSG11Q9UQ72 335 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 LAMP3Q9UQV4 416 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 RCL1Q9Y2P8 373 aaKnown RBP5.56□□□□□ -1.52
MSH5-217ENST00000494458 MMP24Q9Y5R2 645 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 ZNF462Q96JM2 2506 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 USF3Q68DE3 2245 aa5.56□□□□□ -1.52
MSH5-217ENST00000494458 DCHS2Q6V1P9 2916 aa5.55□□□□□ -1.52
MSH5-217ENST00000494458 FXYD6-FXYD2A0A087WZ82 144 aa5.55□□□□□ -1.52
MSH5-217ENST00000494458 A8MXK9 166 aa5.55□□□□□ -1.52
MSH5-217ENST00000494458 FAM25EA8MYX2 175 aa5.55□□□□□ -1.52
MSH5-217ENST00000494458 E5RGE8 158 aa5.55□□□□□ -1.52
MSH5-217ENST00000494458 J3QR06 171 aa5.55□□□□□ -1.52
MSH5-217ENST00000494458 TOR1AO14656 332 aa5.55□□□□□ -1.52
MSH5-217ENST00000494458 TAAR5O14804 337 aa5.55□□□□□ -1.52
MSH5-217ENST00000494458 ST8SIA3O43173 380 aa5.55□□□□□ -1.52
MSH5-217ENST00000494458 BCL2L11O43521 198 aa5.55□□□□□ -1.52
MSH5-217ENST00000494458 RAMP3O60896 148 aa5.55□□□□□ -1.52
MSH5-217ENST00000494458 HPRT1P00492 218 aa5.55□□□□□ -1.52
MSH5-217ENST00000494458 IGLV1-47P01700 117 aa5.55□□□□□ -1.52
MSH5-217ENST00000494458 FGF2P09038 288 aa5.55□□□□□ -1.52
MSH5-217ENST00000494458 IGHV1-8P0DP01 117 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms